Corynebacterium lujinxingii: IAU68_06795
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Entry
IAU68_06795 CDS
T07743
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
cluj
Corynebacterium lujinxingii
Brite
KEGG Orthology (KO) [BR:
cluj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cluj03019
]
IAU68_06795 (hrpA)
Enzymes [BR:
cluj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IAU68_06795 (hrpA)
Messenger RNA biogenesis [BR:
cluj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IAU68_06795 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
nSTAND3
ABC_tran
ResIII
SLFN-g3_helicase
AAA_25
NACHT
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QNP89414
UniProt:
A0A7H0JWJ8
LinkDB
All DBs
Position
1374854..1378795
Genome browser
AA seq
1313 aa
AA seq
DB search
MTEQTSPSPSPTKPQLYEALDSVPLAEVRRFRRRLKNAKSPEALSAIGADIDTARGVVDK
RDALIPEIKYPENLPVSARRDDIMELVRDNQVVVIAGETGSGKTTQIPKMLLEMGRGRRG
LIGHTQPRRLAARTVAERIADELGQDIGQSVGYAIRFDDRVSNSTSVKLMTDGILLTEMQ
RDRFLNAYDTIIIDEAHERSLNIDFLLGYLKRLLPKRPDLKVIVTSATIDPEAFANHFAD
AGGNPAPIIEVSGRTYPVEIRYRPLVEQVEAKDGSVKEIDTDMIDGVVAACKELMGEGKG
DILCFFASERDIRDCMEAIEKQHWRGVEVVPLFGRLSNAEQHRVFSAHSGRRIVLSTNIA
ETSLTVPGIHYVVDTGLARISRYSTRTKVQRLPIEEVSQASANQRSGRSGRTADGIAIRL
YSEENFESRPEFTDPEILRTNLASVILQMISLRLGEITEFPFIQPPDHKAVRDGLMLLNE
LGAIKHKERDGAPALTGIGRDIARIPVDPKMARMLVEANRLGVLDDVTVIVAAMTIQDVR
ERPLEYQAQADQSHARFKDKESDFLSSLKLWDYIGDSRDELSGNAFRKRMKREFLHYMRI
REWFDLVRQLRDVERGLGWSRAENVAGERDANAIHQSLLTGLLSNIGARDGNSKEFQGAR
GTRFMVFPGSSLSKKPPEFLMAAELVETSRLWARDVAKIEPAWVEHAAGDLLKHSYSEPV
WSRKRSAAMVHEKSMLYGVTIVRDRLVPYHRVDPEGARNMFIRHALLEGDWNRHHTFIDH
NEALLAEASEVEEKVRRRGLVVDEDTLFDFYDSRLPESVTTARHFDSWWKKQRANDKHYL
DFDPAALLDDDGVDASANAFPEAKRQGSVEYALRYKFEPGDPFDGVTVEVPVPLLANLRP
DGFDWLVPGLRSELAAEMIRTLPKALRKTVVPAPDFAERALNAMPDDVDPDTTAFTDALS
EALRSVGGRGINGTDFNPAALPPHLKVTYAAIDRRGKIVDHDKDLTALKRRQAGKIKSSV
SKAGRKSESEAVQKWTADSLGAVPETVKTTIDGNEVDAYPALEATKEGVKVTVHPTKAAA
DASMATATLTLLLREIPVNAQQMTKGLPLRHKVAVDRYPHGGAEGLVEDARVAVIRDLMV
AHGGPVRSPEEFDALLAEIKPQVSGGVRRAVVNLAPALAAYADMSAELEQWDGPAIDDMR
SQLRFYLPKHAVTIHGVAHLQHLPRYIDAMRIRLEDMRVDPDRDADRQAVVDGVKQYLAQ
RMQKLPANRRKTRAYKDIVWLIEELRVSLFAQRLGTPRPVSQRRIEKKVDALR
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcaaacttccccttccccttccccgacgaagccgcagctctacgaagcactc
gattccgtgccgctcgctgaggtgcgccggttccgcaggcggctaaaaaacgcgaaatcg
ccggaggcgctttccgcgatcggtgctgatatcgatacggcgcgtggggtcgtcgacaag
cgtgatgcgctgatcccggagattaagtatccggaaaacctgccggtatctgcccgccgc
gacgacattatggaactggtgcgcgacaaccaggttgtggtcatcgcaggcgagaccggt
tccggcaagacaacacagatcccgaaaatgctgctcgagatgggccgcggccgacgcggt
ctgatcgggcacactcagccccgcaggttggcggcgcgtacggtggccgagcgcatcgcc
gacgagttgggccaggacatcgggcagtctgtcggctacgccattcgtttcgacgaccgg
gtctccaactccacctccgtgaaactgatgactgacggcattttgctcaccgagatgcag
cgcgaccgcttccttaacgcctacgacacgatcatcatcgacgaggctcacgagcgctca
ctcaacatcgactttctgctcggctacctcaagcggctgctaccgaagcgtcccgacctg
aaagtcatcgtcacctccgcaaccatcgacccggaggcatttgcgaaccatttcgccgac
gccggcggtaacccggccccaattatcgaggtatcaggccgcacgtatccggtggagatt
cgctaccgcccgcttgtcgagcaggtggaagcgaaagacggctcggtcaaggagatcgac
accgacatgatcgacggtgtcgtcgccgcttgcaaagagctcatgggcgaaggcaaaggc
gacattttgtgtttcttcgcctcggagcgtgacatccgcgattgcatggaggcgatcgag
aagcagcattggcgcggtgttgaggtcgtgccgctgttcggccgtttgtccaacgccgag
cagcaccgcgtgttctccgcgcactccggcaggcgcatcgtactgtccaccaacattgcc
gagacatcgctgactgtcccgggcatccactacgtggtggacaccggattggcacgtatc
tcgcgctactccacccgcaccaaggtgcaacgtctgccgatcgaggaggtctcgcaggcc
tcggcaaatcagcgctcaggccgctcgggacgaaccgctgacggcatcgccatccgtctg
tattcagaggagaacttcgaatcccgtccggagttcacggatcctgagatcctgcgcacc
aacctcgccagcgtgatcctgcaaatgatctcgctgcggctgggcgagatcaccgagttc
ccgttcatccagccgccggaccacaaggccgtgcgcgacgggttgatgctgctcaacgag
ctgggggcaatcaagcacaaggaacgcgacggagcgcccgcgctgaccggcatcggccgc
gacatcgcgcgcatccccgttgacccgaagatggcgcgcatgctggttgaggcaaaccgg
ctgggcgtgcttgacgacgtcaccgtcattgtcgccgcgatgactatccaggacgtgcgc
gagcggcctttggagtatcaggcccaagcggaccagtcgcacgcccggttcaaggacaaa
gaatctgactttttgtcttcactgaaactctgggactacatcggcgactctcgcgacgag
ctctcgggcaacgcgttccgcaaacgcatgaagcgcgagttcttgcactacatgcgcatc
cgcgagtggttcgacctggtgcgccagctgcgcgatgtcgagcgcgggctcggttggtcg
cgcgcagaaaatgtcgcaggcgagcgcgacgccaacgccatccaccagtccctgctgacg
ggtctgctctccaacattggcgcccgcgacggcaactccaaggagttccagggcgcgcgc
gggacgcggtttatggtctttccggggtcgtcgctaagcaaaaagcccccggagttcctt
atggccgccgaactggtggagacctcccgcctgtgggcgcgcgacgtggccaaaatcgag
ccggcctgggtcgaacacgccgcaggtgacctgctgaagcactcctactcggagccggtc
tggtcgcggaagcgctccgcggcaatggtgcacgaaaagtcgatgctctacggcgtgacc
atcgtgcgcgaccgcctggtgccgtatcaccgtgtcgatcccgaaggcgcccgcaacatg
ttcattcgacacgcactgttggagggcgattggaaccgccaccacacttttatcgaccac
aacgaggcactgctcgcggaggcctccgaagttgaggagaaggtgcgccggcgcggactc
gtcgtcgacgaggacacgctgttcgacttttacgactcgcgcctgccggaatccgtgacc
accgcccgccacttcgactcctggtggaagaagcagcgcgcgaacgacaagcattacctg
gacttcgacccggccgcattgcttgacgacgacggcgtcgacgcctccgcaaacgccttc
cccgaggccaaacgccagggctcggtcgagtatgcgctacgctacaagttcgaacccggc
gaccccttcgacggcgtgacagtagaggtgccggtgccgctactggcgaacctgcgcccc
gacggcttcgactggctggtgccgggcctgcgctccgagctcgccgccgagatgatccgg
acgcttccgaaggcgctgcgcaaaaccgtggtgcctgcgcctgacttcgcggagcgagca
cttaatgcgatgcccgacgacgtcgacccggacacaacagcgtttaccgatgcactctcg
gaggcccttcgcagcgtcggtggccgaggtatcaacggcacggacttcaacccggcggcg
ttgccgccacacttgaaagtcacctacgcagctatcgaccgccgcggcaaaattgtcgat
cacgacaaggatctcaccgcgctgaagcgtcgccaggcaggcaagattaagtcctcggtg
tcaaaggccggccgcaagtccgaatctgaggccgtgcagaagtggaccgccgattccctc
ggtgcggtgccggagactgttaaaaccaccatcgacggcaacgaggtcgacgcctacccg
gccctggaggcaacaaaggaaggcgtgaaggtcacagtccacccgacgaaggcggcagcg
gacgcgtcaatggccactgccacactgacgctgctcctccgcgagattcccgtcaatgcg
cagcagatgacgaaggggctgccgctgcgccacaaggtggcagtggaccgctatccgcac
ggcggcgccgaggggctggtggaggacgcacgcgtcgcggtcatccgcgacctcatggtt
gcacacggtgggccggtgcgttccccggaggagttcgacgcgctactggccgagattaaa
ccgcaggtatccggcggtgtgcgacgtgcggtggtcaaccttgccccagctctggcggct
tatgcggatatgtcagcggagttggagcagtgggacggcccggcgatcgacgatatgcgc
tcgcaattgcgtttctatttgccgaagcacgcggtgactatccacggcgttgcccatttg
cagcacctgccgcgctatatcgatgcgatgcggatcagactcgaggacatgcgagtcgat
ccggaccgagatgcggaccgtcaagccgtggttgacggcgtcaaacagtatcttgcgcag
cggatgcagaaactgccggcgaaccgccggaaaacgcgcgcgtacaaggacattgtgtgg
ctgatcgaagagttgcgcgtcagcctcttcgcgcagcggttgggcactccccgcccggtc
agccagcgcaggatcgaaaagaaagttgacgcgctgcgctag
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