Cyclopterus lumpus (lumpfish): 117725128
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Entry
117725128 CDS
T09199
Symbol
lingo2b
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117725128 (lingo2b)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117725128 (lingo2b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
LRR_5
Ig_2
ig
LRR_Zer-1
LRR_EndoS
V-set
LRR_9
LRRNT
Sp38
Ig_PDGFR_d4
LRR_6
Motif
Other DBs
NCBI-GeneID:
117725128
NCBI-ProteinID:
XP_034381008
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All DBs
Position
22:6627531..6633342
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AA seq
612 aa
AA seq
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MRHPALNHCHLFLGGALLLLLASQTLSCPARCECSAQSKSVSCHRKRLPTIPEGIPIETR
VLDLSKNKLRIITPDNFSSFLQLEDLDLSDNLISVVEPGSFRSQLALRSLNFRSNLLQLV
PVGVLSGLTNLTRLDLSHNRLVVLLDHAFQDLRRLTSLEVGDNELVFVSQRAFTGLLGLQ
SLTLERSNLTVVPTDALAHLHSLVELRMRYLSISFLKPFSFKRLSRLRRLEIDYWPWLDT
LPALSLHGLNLTTLIITNTNLSAFPGAALRYLPYLTHLNLSYCHIQHIHQGELGQLPHLL
ELHLQGSHLISIEPFAFAGLKSLQLLDVSQNRLDSLESGVFASPDVLQRLCLGGNPLVCD
CRLLWLINSHKPPFLQILDVQPECSAPEHLLGKPLRDLKEPLVSRYMTCTKPRIGPNTTQ
LLMADEGQPARLNCTAEGAPRPSVVWITPHRRSITTKSSGRVEVQPDGTLEIKEAELHDS
GVYLCIASNPAGNASLSASLAVKSLGIGDRSHFSNRSSNYQTDSNSTWGNGTVLYNMTVP
IDLKTIIISTAMGCLSFLGVVIFCFLLLFIWSRGKGRHKSNFDIEYVPRKSNGAAADVTE
TSGPRRVNMKMI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcgacacccagccctgaaccactgccacctcttcctgggcggggccttgctgcttctc
ctggccagccagaccctgagctgccccgcccgctgcgagtgctccgctcagagcaagtcg
gtcagctgccaccgcaagcgcctgcccaccatccccgaaggcatccccattgagacgcgc
gtcctggacctcagcaagaacaagctacggatcatcacgccggacaacttttcctcattc
ctgcagctggaggacctggacctcagcgacaacctcatcagcgtggtggagcccggctca
ttccgctctcagctcgctctccgctcgctcaactttcgcagcaacctgctgcagctggtt
cccgtcggcgtgctgtcgggcctgaccaacctcacccgcctcgacctcagccacaaccga
ctggtggttctcctggatcatgccttccaagacctgcgcaggttgacgtccctcgaggtg
ggcgacaacgaactggttttcgtctcgcagcgggccttcacgggattacttggactccaa
agtctgaccctggaacgttccaatctgaccgtggttcctactgatgctctggcacacctg
cacagcctagtcgaactgcgaatgcgctacttgagcatcagttttctaaagcctttctcc
ttcaagaggttatcacgtctacgccgactggagattgattactggccctggctggacacg
ttgcctgccctctcactgcacggcctcaacctcacgacgttgatcataaccaacaccaac
ctgtctgccttccctggtgcggcactgcgttacctgccctacctcacacatctcaacttg
tcctactgccacatccagcacatccatcagggagagctgggccaactcccacacctgctg
gagctccacctgcaagggtctcatctgatttctattgagccctttgcattcgcgggcctc
aaatctttgcagctactggatgtgtcacagaaccgcctggactctctggagagtggagtg
tttgcctcgccagacgtcctccagaggctctgtctgggtggaaacccattagtgtgcgac
tgcagattgctttggctgatcaatagccataagcccccctttctgcagattctggatgtg
cagccagagtgcagcgccccagagcacctcctggggaaaccactccgtgacctcaaggag
cccctggtctccagatacatgacctgcaccaaaccccggattggacctaacacgacccag
ttgctgatggctgatgagggtcagcctgcccgcctgaactgcacggcggagggagcacct
cggccctcagtggtgtggattacgcctcacagacgctccatcacaaccaagagcagtggc
agggtggaagtccagccggatggtaccctggagatcaaggaagcggagctgcatgacagc
ggtgtgtacttgtgcattgccagtaacccggctggaaacgccagcctgtcggcctcttta
gctgtgaaaagcctgggcatcggggacagatctcactttagcaacaggagctcaaactat
caaacagactctaacagcacgtggggtaatgggacagtactgtacaacatgacagtcccc
atagaccttaagaccatcattatatctacggcaatgggctgcctgtccttcctaggtgtg
gtcatcttctgcttcctgcttctgttcatctggagccgagggaaagggcgccataagagc
aactttgatatcgagtacgtcccacgcaaatccaacggggcggcggcagacgtgacagaa
acaagtggcccgagacgagtcaacatgaaaatgatttga
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