Cyclopterus lumpus (lumpfish): 117725168
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Entry
117725168 CDS
T09199
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117725168
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117725168
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
SALM family
117725168
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117725168
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_1
fn3
Ig_2
LRR_5
LRR_9
LRRCT
GP79
Sp38
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
117725168
NCBI-ProteinID:
XP_034381070
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All DBs
Position
22:4779100..4786195
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AA seq
788 aa
AA seq
DB search
MDKVVISLLLLGTAVTMVHACPKYCVCQNLSESLGTLCPSKGLLFVPLDIDRRTVELRLG
GNFIIKVTTQDFANMSGLVDLTLSRNTINAIQPFSFLDLETLRSLHLDSNRLTQLGPDDL
RGLVNLQHLILNNNQLNQIFDTAFDDFFATLEDLDLSYNNLRSVPWEAISKMVNLHQMSL
DHNLIAFISEGTFTDLDKLARLDLTSNRLQKLPPDPIFGRSQSNAVMSTPYAPPLSLSFG
GNPLHCNCEVLWLRRLEREDDMETCASPASLKGRYFWSVREEEFICEPPLITQHTHKLLV
LEGQTASLRCKAVGDPMPSVHWVAPDDRLISNSSRATVYENGTLDITITTPKDYGTFTCI
AANAAGESTASIELSIIQLPHLSNGTNRTTQSKSGLSDITSSTKISKGEPKPLPEKVVSV
SEVTAVSVVVKWTVSKSTPKVKMYQLQYNCSEDEVLIYRMISMTNRAFVVTNLVPGMQYD
LCVLAIWDDTATTLTATNIVGCVQFITGEDYPQCQSIHSGFLGGTMILVIGGIIVATLLV
FIIILMVRYKVTSGIQANKLPNVSNTYSQTNGGLNRFNGAPPQVKSTVVVMREEMVEFKC
GSLQSSLSSSSSSSNSLDSQTGKKAGDRYSMHGSECSTLPSSKFRRHRHGANARPNLDHL
LGAFTSLELRGVARDHHGASGTATTSNAVMTVAVVPPSDKEPLLGRAESTTMLGRLLGMP
QEGKPKRSHSFDMGHVGAAQCRGSYPRRISNIWTKRSLSVNGMLLQYDDSEDEKPPFESS
EWVMESTV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtggtcatcagtctcctgcttctgggaaccgcagttacgatggtccatgca
tgtcccaaatactgtgtctgccagaacctctcagagtctctggggactctgtgcccctcc
aaaggcctgctctttgtcccactggacatcgaccggcgaactgtggagctccggctgggc
ggcaacttcatcataaaggtcacaactcaggactttgccaacatgtcaggtctggttgat
ctcaccttgtcccgaaacaccatcaacgccatccagcctttctctttcctcgacctcgag
accctgagatccctgcatctcgatagtaaccggttgactcagctggggccagacgacctc
cgagggctggtcaacctgcagcacctgatcctcaacaacaatcagctgaatcagatcttc
gacacagcctttgacgacttttttgcgacactggaggatctggatttgtcgtataacaac
ttgcgcagtgtgccttgggaagccatcagcaagatggtcaacctccatcaaatgagtctg
gatcataacctcatcgccttcatttccgaggggacttttacagatctggataaactggcc
cgcttggacctcacgtccaaccgtctccagaagctccctccggacccgatctttgggcgc
tcccagagcaacgcagtgatgagcactccttatgcacctccgctctctcttagctttggt
ggaaacccattgcactgcaactgtgaggtgctttggcttcggaggctggagcgtgaggat
gatatggaaacctgcgcctctcctgctagtctaaaggggcgctacttttggtctgtccgt
gaggaggagtttatttgcgagccccctctcatcacgcaacatacacacaagttacttgtg
ctggaaggccaaacggctagcctacgctgcaaagcagtcggggatccgatgccaagtgtg
cattgggttgctcctgatgaccgtttgatcagcaactcctccagagcaacggtttatgaa
aatggcaccttggatatcacaatcaccacgccaaaggattacgggacctttacttgcata
gctgccaatgctgctggggaatctacggcctccattgagctgtcaatcattcaactcccc
catctaagtaatggtacaaaccgtaccacgcagtccaagtcggggctttcagacataact
agctctaccaagatcagtaaaggggagcctaaacctctaccagagaaggtggtgtctgta
tcagaagtgactgccgtctcggttgtggtcaagtggactgttagcaaatcaactccaaag
gtcaaaatgtatcagctgcagtacaactgttccgaggatgaagtcctcatttacaggatg
atttccatgactaacagagccttcgtagtgacaaatcttgtcccagggatgcagtatgac
ctgtgtgtcttggccatctgggatgacaccgccaccaccctcactgccaccaacattgtc
ggctgtgtccagttcatcaccggggaggactacccacagtgccagtccatccacagtggc
ttcctgggtggcaccatgattctggtcatcggtggcatcattgtggccacgctgctggtg
ttcatcatcatcctcatggtgcggtacaaggtgaccagtggcatacaggctaataaatta
cccaatgtgagcaacacgtactctcaaaccaacggcgggttgaacaggttcaatggtgcg
ccgccacaggtcaaatccacagtggtggtcatgcgtgaggaaatggtagagttcaagtgt
ggatccctccagagcagtctgtcctcgtcctcatcctcctccaactcattagacagccaa
acaggaaagaaagctggcgaccgctacagtatgcatggcagcgaatgcagcaccctgccc
agcagcaagttcaggaggcacaggcacggcgccaatgcacggccaaacctggaccacctt
ttaggggccttcacctcactggagctgcgaggggtagcgagggaccaccatggggcttcc
ggaactgctaccacttccaatgctgtgatgacggtggctgtggtacccccatccgataaa
gaacccctgctcggaagagccgagtccaccaccatgctgggacgtctattagggatgccc
caggagggtaagcccaagaggagtcactcgtttgacatgggtcatgtgggggctgcgcag
tgtcgcggcagctaccctcgcaggatcagcaacatctggactaagcgcagcctgtccgtt
aacggcatgcttctgcagtacgatgacagcgaggacgagaagcccccttttgagagctct
gagtgggtgatggaaagcactgtttga
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