Cyclopterus lumpus (lumpfish): 117725185
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Entry
117725185 CDS
T09199
Symbol
zfp36l1a
Name
(RefSeq) mRNA decay activator protein ZFP36L1a
KO
K18753
butyrate response factor
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117725185 (zfp36l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117725185 (zfp36l1a)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117725185 (zfp36l1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tis11B_N
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Torus
zf-CCCH_UNK-like_4th
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
117725185
NCBI-ProteinID:
XP_034381095
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All DBs
Position
22:complement(19441134..19445811)
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AA seq
370 aa
AA seq
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MTAAVVSPFFDFEVMNKNNKLLSYNNNLGPMSVPCTGTNVPISSPAGALLDRKAVGCPSV
GGVYQRRHSVSSTKFSQNQFLNSLKAADHCSLISGIGNAGCGSNNKENRMRDRSFSETGE
RPLNKCLGPASPTGSQVNSSRYKTELCRPFEENGSCKYGDKCQFAHGIHELRSLSRHPKY
KTELCRTFHTIGFCPYGPRCHFIHNAEERRGPPQQCSPLNSSNKMDRPRLQHSYSFAGFS
SSAGLRDSPTSVTPPPMFFPDEVPDWPSSNPFTYSSQELANLFGPSLNVGPVGTEPNAPA
PPSPTSTPYYFRPMLVSPQMFDTPSSQPDSLSDQDGYQSSSGGSLSGSESPTLDTTRRLP
IFSRLSISDD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagccgtggtgtcgcctttcttcgacttcgaagtaatgaacaagaacaacaaa
ctgctcagctacaacaacaacctgggccccatgtctgtcccttgcactggcaccaacgtg
cccatatccagccccgccggagccctgctggacaggaaggcggtggggtgtccctcggtg
ggaggcgtgtaccagcggcggcactctgtcagcagcacaaagttcagccagaaccagttc
ctgaacagcctgaaggcggcggaccactgctcgctcatctcggggatcggcaacgccggc
tgcggcagcaacaacaaggagaaccgcatgcgagaccgctccttctccgagacgggcgag
aggcccctcaacaagtgcctgggccccgccagccccaccggcagccaggtgaactccagc
cgctacaagacggagctctgcaggcccttcgaggagaacggctcctgcaagtacggcgac
aaatgccagtttgcccacgggatccacgaactacgcagcctgagccgccaccccaaatac
aaaacagagctgtgccgcaccttccacaccatcggcttctgcccgtacgggccccgctgc
cacttcatccacaacgccgaggagcgccgcgggcctccccagcagtgctcccctcttaac
tcctccaacaagatggacaggcctcgcctgcagcacagctacagcttcgcgggcttctcc
agctcggccgggctgagggacagccccacctccgtcacccctccgcccatgttcttcccc
gacgaggtcccggactggcccagcagtaaccccttcacctactccagccaggagctggcc
aacctgtttgggcccagcctcaacgtcggtcccgtgggcacagagcccaacgcccccgcg
cccccgtctccgacgagcacgccgtactatttcagacccatgttggtgtccccccagatg
ttcgatactccatccagccagcccgactctctgtcagaccaagatggctaccagagcagc
tccgggggcagcctgagcggctccgagtcccccacgctggatacgacccgccgcctcccc
atcttcagccgcctctccatctccgatgattag
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