Cyclopterus lumpus (lumpfish): 117725190
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Entry
117725190 CDS
T09199
Symbol
rtn1a
Name
(RefSeq) reticulon-1a
KO
K20721
reticulon-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117725190 (rtn1a)
03036 Chromosome and associated proteins [BR:
clum03036
]
117725190 (rtn1a)
Membrane trafficking [BR:
clum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117725190 (rtn1a)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117725190 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
117725190
NCBI-ProteinID:
XP_034381103
Ensembl:
ENSCLMG00005012819
UniProt:
A0A8C3G107
LinkDB
All DBs
Position
22:complement(11416674..11436068)
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AA seq
723 aa
AA seq
DB search
MSAQPGEELGSEGRWFGDDYERNGLFGNTPARLGDLREDRKPRGDEASDDRDQQSHSLQD
DGKRPPVAMETASTDDPMSGLFRTPMYDDGDVYTSLMSNQSFTSGQEASYLSDDLKPSKP
STGSSALDSFSSDPYSFSSSTKMTSNLADDMPKSLFGSDKTESYNYMDISHGDERQEQHS
LVDTGLTGHDSLCSYMDKNHRGDEEEEEGSALGSHSFPYVEEPSDEELSDYRSYRNLGGT
PQTASPVKITLTESHPQTAKTELQQHAPPVSVSERENVLSVGLQGVPTVTLSEPEDDSPA
STPNASPTQKEFSSHDMFKADAVKSAASKSSPSTKAGSREHDGSSAESGDSEIELVSEEP
PKAPSNPFVQSPKSKGTFSQPNNPFDNPPVAKGGFGLAGNHASPTAYSILREEREAELDS
DLFIESASEESPKREQGFSDPKQGVCPPSPLVPSAVPPRSMAEAAPAEPLITEKIKTPVK
TEEDRPSKPKPPTAAVPPEVRSERPHQEDMHTNEGKGDLGKPAASIFLQGFDKQKAIDLL
YWRNVKQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSASISFRIYKSVLQAVQKTDE
GHPFKAYLEIEIALSQEQISKYADKILLYTNTCMKELRRLFLVQDLVDSLKFAVLMWLLT
YVGALFNGLTLLILAVVSMFGMPVVYEKHQAQIDQYVGLIRTQVNSVVGKIQAKIPGAKR
KEE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcagcccggtgaggagctaggttcggaggggaggtggtttggggatgactat
gagaggaacggcctgtttgggaacacgccggcccggttgggcgacctacgtgaggaccgt
aaaccgagaggcgacgaggcgtcggacgaccgggatcaacagtctcattctctccaggac
gacgggaaaaggcctcctgttgctatggaaactgcatctacagatgaccccatgtctggc
ctgtttaggacgcctatgtatgatgatggggatgtctacacttccctgatgtcaaatcag
agcttcacatcaggtcaggaagcctcctacctgtcggatgacctgaaaccgtccaagccc
tctactggctcctctgccctggattccttctccagcgacccctatagcttcagctccagc
accaagatgacttccaacctggctgatgacatgccaaaatctctgtttggttcagataag
acagaatcctacaactacatggacattagccacggggatgagcgtcaagagcagcacagc
ctggtggacacaggcttaactggtcatgactcattgtgcagctacatggataaaaaccac
agaggagatgaggaggaagaggaaggttcagcactgggctcccactctttcccctacgta
gaggagccatccgatgaagagctgtcagattaccgctcctaccgaaacctgggtggaacg
ccacagacggccagcccggtgaagatcactttgaccgagtcccatcctcaaactgccaag
actgagctgcagcaacacgcccctccagtcagtgtctctgagcgtgaaaacgtcctcagt
gtgggcttgcagggggttcccactgtgacgctatcagagccagaagatgacagccctgcc
tccactcccaatgcttcaccaacacaaaaagaattctcttcccatgacatgttcaaggcg
gatgcagtgaagtctgcagcttccaaaagcagtccaagcacaaaggcaggcagcagggag
catgacggcagcagcgctgagtctggagactcggagattgagctggtgtctgaggagcct
ccaaaggcccctagtaacccgtttgtccagtcgcctaaaagcaagggcactttcagccag
cctaacaacccctttgacaatcccccagtagccaagggtggtttcggcctagcaggcaac
cacgcttcacccacagcctacagcattctgagagaggagagagaggcagagcttgacagt
gatctcttcattgaatctgcgtctgaagagagcccaaagagagagcagggcttcagtgac
cccaaacagggagtatgccctccctcccccctggttcccagtgccgtccctccccgaagt
atggctgaggcggcgccagccgagcccctaatcacagaaaagatcaagaccccagtgaaa
acagaggaggatcgccccagcaagcccaagccaccaactgctgccgtgcccccagaggtg
cgatcggagaggccccaccaggaagacatgcacaccaatgagggcaaaggagacctcgga
aagcctgctgcttcaatcttcctgcagggctttgataaacaaaaagcaattgacctgctc
tactggaggaatgtgaagcagtccggggctgtgttcagcagcgtgcttctgcttctcttc
tcgctgacccagttcagcgtggtcagtgtcggagcctacttagccctggcggccctctct
gccagcatcagcttcaggatctacaagtctgtgctgcaggctgtgcagaagaccgatgag
ggacaccctttcaaagcctacttggagatagaaatcgctctatcccaggagcagattagt
aaatatgccgacaaaatcctactgtacaccaacacctgtatgaaggagctccgcaggctg
ttccttgtacaagacctggtggactccttaaagtttgctgtgttgatgtggctgctgacc
tacgtgggcgctctcttcaatggcctgacactgctcatcctagctgtggtctccatgttc
ggcatgcctgtggtctacgagaaacatcaggcacagattgaccagtacgtgggactaata
cggacccaggtcaactctgtggtggggaagatccaagcgaagatccctggggccaagagg
aaggaggagtag
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integrated database retrieval system
