Cyclopterus lumpus (lumpfish): 117725227
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Entry
117725227 CDS
T09199
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117725227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117725227
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
NGL family
117725227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
ig
V-set
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
117725227
NCBI-ProteinID:
XP_034381152
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All DBs
Position
3:26642084..26686679
Genome browser
AA seq
635 aa
AA seq
DB search
MLNKMISSLQRQTMRGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQLSVVKPSAF
LGLVNLQKLWMMHAQVQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHSPAVFKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMAAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTTVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIETPGDDSQTPLPPFGWVS
TSTTRGTPISTRTTERTYTIPVLDPDGEGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSAYHH
GPMLGTLHSSASFENLKIKAVTNNHLNESAVYLIE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaaaatgatctcctccctccagcgccagacaatgagaggtcgtaggctgaag
ggggcgctgtccaaccccctcttcgtgcttcttttggccctccagatcttggtggtggcc
gggctggttcgcgctcagacctgtccttccgtctgctcatgcagcaaccagttcagcaaa
gtcatatgcacccgccgcagcctacgggacgtcccggatggcatttccaccaacactcgc
tacctgaacctccaggacaacctcatccaggtcatcaaggtggacagtttcaaacacctg
cgtcatctggagatcctgcagctgagcaaaaaccacatccgcaacattgaaattggcgcc
ttcaatggactggccagtctcaacaccttggagctctttgataatcggcttacgacaatc
cccaatggagcatttgagtacttgtccaagctaaaggaattatggctacggaacaacccc
atcgaaagtataccatcttatgccttcaaccgggtcccctcgctccgaaggctggatcta
ggtgagctcaaacgtctctcctacatttccgatggagccttcaaggacttgagcaacctg
cgctacctgaacctgggaatgtgcaacctcaaggagatccccaacatcttacccttggtc
aggctcgaggagctagaaatgtcaggaaaccagctctccgtcgtcaagcccagcgcattt
ttaggattagtgaacctccagaagctgtggatgatgcacgcccaggtccaaacgatcgag
aggaattccttcgatgaccttcagtcactggtggagctcaacctggctcacaacaacctt
acgtttctaccgcatgacctcttcacgccgttgcatcgcctggagcgggtccacctccac
cacaacccttggaactgcaactgtgatatcctgtggctcagctggtggctgaaggagacg
gtgccggccaacaccagctgctgcgcccggtgccattcccctgcagtctttaaaggccgc
tacattggggaattggaccacagctacttccagtgtgacgttcccgtcatcgtggagcca
cccagtgacttgaatgtgacagagggcatggccgccgagctcaaatgtcgtacgagctcg
ctgacatccatcagctggctgacgccaaacggctcgttggtgacacacggggcttataag
gtgcgtctgtccgtgctcaatgacgggacactgaactttaccaccgtcacgatgcaggac
actgggacttacacctgtatggttagcaacacagcgggcaacatttctgcctccgctgtg
cttaatgtcacttccgtggaaaacagtggggtgacctattttaccaccgtcaccgtggag
accatcgagaccccgggggatgatagccaaacgccgcttcccccattcggctgggtgtcg
acctccacgacgagaggcactcccatttcaacgaggaccacagagcggacttacacaatt
ccagttcttgatccggacggagagggcgccctcaatggcctggacgaggtgatgaaaacc
accaagatcatcatcggctgcttcgtggccatcacgctcatggctgccgttctgctggtc
attttctacaagatgaggaagcagcacaaccagcaggaccccgatggccccgcgtcctcc
atggaggtcataacagtcgaagaagagctcgcaggcgtcgccgccatggagaggcaccta
tcgctgccccctctggagcactacaaccactacaacacctacaagagcgcttaccaccac
ggtccaatgctcggtaccctccatagctcagctagttttgaaaacctaaaaattaaggct
gtaactaacaaccatttaaatgaatctgcagtttatcttatcgagtaa
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