Cyclopterus lumpus (lumpfish): 117725265
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Entry
117725265 CDS
T09199
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117725265 (exd1)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117725265 (exd1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
117725265
NCBI-ProteinID:
XP_034381224
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Position
22:complement(9962061..9965544)
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AA seq
569 aa
AA seq
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MAVDEVQFLNILKGKRVKLTLKTSSYFGVIQRINLNKTLILTDVVCGHNGFKCPGSKMFF
GHEVIHVEFANEADTGSGNIHDHGLEEHLDVEKFQAYRKTIALDEDAQEQEYFNYVVIDE
FHEKFVSAVMHIKKQSVISVGADGVEVFKYGRLCWLQIATKHKVYLFDILLLGARAFKNG
LSMILENKRILKVIHDCRAIAGCLIAQFGVKLTNVFDTQIADVMCFYSKTGGLLPDRVST
LQEVVSFHLKVPSSQLLSLQMKSQLTKEEREMWFKRPCPIPLLKLMALSAIHLQPLRLVL
LDTLMMDYMALVDSYLNSGFYEPDELQHVNMESVLELPRELRQLEVMRRERQEWAADHYH
VTEQGLLDRYNLRAPSPMQTLPAAEVNGQQHATVELPSQVDPLLFKSPTSPRRANNMLSV
DVCASPDSADQPPVPGNLSDLGEQMSVNSSLSLVGGRGCTEVLMNTAGRGSPFGKEQSSI
PALRAFGRGFLLQTSQDQVPRESIGDVMAPDRMGTAPSGHSHAPAQEGIPQPGPSANDLP
KNGTAGDYFTSTAESISSSLAQSFRSFRY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggacgaagtccagttcctgaatatcctcaagggaaaacgcgtcaaactgacc
ctgaagacctcgtcgtactttggcgtcatccaacgtatcaaccttaacaaaacgctgatt
ttgacggacgttgtttgtggccacaatggattcaaatgtccgggttcaaaaatgttcttt
ggccatgaagttatacatgtggaatttgccaatgaagcagacactggcagtggaaatatt
cacgaccacggacttgaagagcatttggatgtggaaaagtttcaggcctacaggaagaca
atcgcattggatgaagacgcacaggaacaggagtatttcaactatgtcgtcatcgatgag
tttcatgagaagtttgtgtctgctgtgatgcacatcaagaagcagagtgtgatcagtgtg
ggagctgatggagtcgaggtatttaagtatgggaggctgtgttggctgcagattgccact
aaacacaaggtttacctgtttgatatcctgttacttggcgctcgggcctttaagaacggt
ctttccatgatcctggaaaataagcgcatactgaaggtcatacatgactgcagagccatt
gctggatgtctgattgctcagtttggagtaaagcttaccaacgtctttgatacgcagatt
gcagatgtcatgtgcttctactctaagacaggaggtcttctcccggatagagtcagtact
ctgcaggaggtggttagtttccatctaaaggtgccctcctctcaactcttatcccttcag
atgaagtcacagctcaccaaggaagaaagggagatgtggttcaagcggccctgtcctata
cccctgcttaagctgatggctctgtcagcgatccaccttcagcctctcagactggtgctg
ctggatactcttatgatggactacatggccctggtggattcatacctcaacagcggcttc
tatgaacccgatgaattacagcatgtcaacatggagagtgtgttggagttgcccagagag
ctcaggcagctggaggtaatgcgtcgcgagcggcaggagtgggctgccgaccactaccat
gtcacagaacaaggtctgctggatcgctataacctccgggccccgtctcccatgcagact
ttacctgcagcagaggtgaacggccagcaacatgcaactgtggaattgccttcacaagtg
gaccctcttctttttaagtcaccgacaagccctcgaagagccaacaacatgttgtctgtg
gatgtctgtgcctcccctgactcagcagatcagcctccagtcccaggcaatttatcagac
ctcggggaacaaatgtctgtcaacagttccctgtctctggtcggaggcagagggtgcaca
gaggtactgatgaacacagcaggtagaggaagtccctttggaaaagagcaatcgtctatc
ccggccctacgtgccttcggaagaggcttccttctccaaacgtcacaagatcaggtcccc
agagagagcattggggatgtaatggctcccgataggatggggacagctccttctggccac
agccatgcacctgcacaagaagggattccccagcctggccccagtgctaatgacctgcca
aagaacggcacggcaggggactattttacatcaacagctgagtccatctcatcttcactc
gcacagtcatttagatctttcagatattaa
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