Cyclopterus lumpus (lumpfish): 117725273
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Entry
117725273 CDS
T09199
Symbol
atg2b
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 2 homolog B
KO
K17906
autophagy-related protein 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04136
Autophagy - other
clum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117725273 (atg2b)
04136 Autophagy - other
117725273 (atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117725273 (atg2b)
03029 Mitochondrial biogenesis [BR:
clum03029
]
117725273 (atg2b)
Membrane trafficking [BR:
clum04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117725273 (atg2b)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117725273 (atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
117725273
NCBI-ProteinID:
XP_034381235
Ensembl:
ENSCLMG00005015730
LinkDB
All DBs
Position
22:10549653..10564284
Genome browser
AA seq
2076 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLDQLSLDLYQGTGSLAQVPLDKWSLNELL
ETADAPFEVIAGFIQTISLTVPWAALLHENCALEVKGLEMVLRPRPRLASGTEPMYWSSF
MTSSMQLAKECLSQKLTDDMGESFQPFEGLEKFAETIETVLRRVKXTFLDTVLRVEHIPE
NSKTGIALEIRIKKIVYCDETSEETSSVNVHQPTTFAHKNLQMEGISVFWDEFSDVSRAG
CRSSPTSTETEPKLSPSWNPKIICEPHPQFTEPLFSTTPFEPVQVGSLCGKIEXSLTLKN
NLAMPGAKLDVVGHIDTLIILLSPRQVHLLLDLCGAFSGGGAPEWGKDRKSRPXQQEDEY
RLHMELNRCLKKDTAVLGTDPDLFESQATRTVSSRDDVFFSMADMDMSHSLSSLPPLGEP
PNVDLDLSLNSNYSASPGESPSENATALWDDYMDVPRQREMQTHETPIQSRDSQLPQKLL
RQTSYPSKTHSDESRPELVFRLTLSSLAVSVLHIDPLPPPDASPSPLGPMAAHFFSMVGP
GQLAPAAFLQSRTVFNQACPHDHLRFVGQGLKINYEHSQGSSLRTFSTDVSLHQMEFLEC
LFPSEAVTGGSQRGIQYTEVTSXHLTPQPSADALLTSCLHLLYKQAERRGPQGGQVRLST
IPRKAEIQVELGPVRSELDISIVDRLNSLLQPQKLATTELMASHMYTSYNKHVSLHKAFT
EVFLDDSHTPTNCHVSLTVNAPLLGLAIRFPIPDLRSDQERGPWFKKSLQKEVLSLELED
LEVKTEFMGGSSPDQTKMELTFRELIGKFQEEPDQPSARFLRVSHTMDGDMTTSESVKFD
WPRIVLKMNPTAVHSILERVTAEDDEGAEDHSLEEEEEEGAAHSLKDVCDFGKPEPSPFS
SRRVMYENEEMVIPGDVAEMTEFQEKTMNNSRFILELCFPNVQLVLPGKAFYEKLHNRIN
NDLLLWEPTAPSPVETVESMPYGVGLSVASQLINTYSKDSFSQFRSTGPEEDSGSEEETM
HYYLPASDLRSRKKKKPKVQSKTXQSLFSVIISVNHGLVALQTNAKKEDKTVLKNKHGEF
WLEVKNAVLFSVTQYEGYKDQHYICFHTSNICMYHQGLVDGGTSVSDVKLPCRTHPHWLE
PTIYQSDTSPERASTPSEGIGLEARSMVSVAVKISSQNAESNVKEFLVAVGVRGATLQHR
VVSPGLGWYDQIVDFLNVSDEPVLGYAPPTSVTTLHLHLWSCSLDYRPFYLPLRSLLVVE
TFSISSSVSLDHYSSTLRIILDEAALFLSDKSNALSVNLVRDYVQVVDMGTLELRITAVK
PGVDGKLSEPRFELRCSSDAIHIRTCSDSCAALMNLIQYVASYGDLLPTAEPEAKHSSTT
QRTKAEFPSRPTSQTLLLAETEQQMLQDLMSEAMEESDGQHAPGLEQNGAHEERNQDQDP
PRSDLFLFPDESGNCNQDSSPTYPMLHSPLITPVPNLAQETDDFCILETPGSRGENLDQE
PVVKQLTSDPVEIKDDYFNQPLEGSDSSRGAMNFPIPEVRYLIKEISVIWHLYGGKDFGS
ATFTASPARSRGSTPHCSPSQTPVRQAKASGRAGGGRGRNPDVLMEIQLSKVRFQHEVYP
QGQVASGPATDQPISRQVFVVQDLEIRDRLATSQMNKFLYLYSSKEMPRKAHSNMLTVKA
LHMCPESGQAPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLATEVEFFSPPAQEAVCIS
TKKAAAPEISCSFSKHTTSSSQDPAPIISVPAQRRLSHNGFSTSGREEVNDNEASAPSFT
DQPIFFREFRFTSEVPIRLDYHGKHVAMEQGTFAGIIIGLTQLNCSELKLRRLCYRQGLL
GVDKLFSYAINEWLSDIKKNQLPGLLGGVGPIHSLVQLVQGFRDLVWLPIEQYRKDGRIV
RGFQRGTASFGTSTAMAALELTNRMVRTIQAAAETAYDMVSPVPDERDTKRVKRFSHYGL
AHQPVDLREGVAKAYTVVKEGITDTALTIYDTATREHEQRGMTGAVGGVLRQLPPAVVKP
LIMATEATSNVLGGMRNQIHPDARQEESQKWRQGEE
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggccattttcggagtccatcaagaaacgggcctgtagatacctcctgcatcgg
taccttggcaactttctgcaggagaagctgagcctggatcagctcagtttagacctctat
caaggcactggatcacttgcacaagtgccattggataaatggtcactcaatgaactccta
gagacggcggatgccccttttgaggtcatcgcagggtttatccagacaatttctctaacc
gttccatgggcagctctactgcacgaaaactgtgccctggaggtcaagggtttggagatg
gtgctcagaccaagaccgagattggcatctggcactgagcccatgtactggtccagtttc
atgacgagcagcatgcaacttgccaaagaatgtctcagccagaaactcaccgacgatatg
ggagagagcttccagccttttgaggggttagagaagtttgcagaaacgatagagacagtt
ctgagaagagttaagntgacatttttggatactgttctcagagtcgaacacattccagaa
aattctaaaactgggatcgcccttgagattcgaataaaaaagattgtttactgcgatgaa
acaagcgaggaaacttcaagtgtgaatgtgcatcagccaaccacatttgcacataaaaac
ctgcagatggaaggcatctctgtattttgggatgagttctcagatgtgtcccgtgctggt
tgtagatcttcaccaacttcaacggaaactgagccaaagctctcacctagctggaatccc
aaaataatatgtgagcctcatcctcagtttacggagcctttattctctacgacacccttt
gaacctgtgcaggtcggaagcctctgtggtaaaattgaantttctctcactctgaaaaac
aacttggctatgcctggagcaaagctggatgttgttggacatattgatacactcatcatt
cttctgtccccgcggcaagttcatcttcttctggacttgtgtggcgctttttctggtgga
ggggcgccggaatggggtaaggatagaaagagcagaccantacagcaagaggatgagtat
cggctccacatggaactgaaccgctgtctgaagaaggataccgctgtgctaggaacagac
cccgacctctttgagagccaggccaccagaactgtgtctagtcgagatgatgtgttcttc
tccatggcagacatggatatgtctcacagcttgtcatcccttcctcctctgggtgaacca
cccaacgttgacttggatttgtcactgaatagcaactactctgcctcaccaggagaatct
ccatctgaaaatgcaacagctctgtgggatgattacatggatgtaccacgacaaagagag
atgcagactcatgaaactcccatccagtcgcgggattcacaactccctcaaaaattacta
agacagacttcctatccatccaaaacccacagtgatgagtcgaggccagagctggtgttc
aggttgacactgagtagccttgctgtctcagtcctacacatcgaccctctgccaccacca
gatgcttcccccagtcccctcggccccatggctgcacacttcttcagcatggtgggccca
ggccagctcgccccagctgctttccttcagtctcggacagtgtttaaccaggcttgcccc
catgaccatctgaggtttgtgggccagggcctaaagatcaactatgagcacagtcaggga
tccagcctgcggactttcagtactgacgtctcccttcaccagatggagtttttggagtgt
ctttttccctctgaggccgtcactggtggctcccaacgaggcattcagtataccgaggtt
acttcctgacatttgacaccacagcccagtgctgatgctcttcttacaagctgccttcac
ctactttacaaacaggctgagcgcaggggccctcagggtggccaggttcgcctgagcacc
attcctaggaaagctgagatccaggtggagctgggccccgtacgctctgagctggacatc
agtatcgtggaccgtctcaactcattgctacaacctcagaagctggctaccacagagttg
atggcctcccacatgtacacatcctataataaacatgtcagcttgcataaggcctttacg
gaggttttccttgatgacagccatactcccactaactgtcatgtatcgcttactgtcaat
gccccattgctgggccttgctatccgcttccccatccctgatctgcgttcagatcaggag
aggggcccttggtttaagaagtccctgcagaaggaagtactttccctggagctggaagac
ctggaagtgaagacagagttcatgggtggcagctctcccgaccaaaccaaaatggagctc
actttcagggagcttattgggaagtttcaggaggagccggatcaaccatctgcccggttc
ctcagagtgtcccacaccatggatggagacatgacaacatctgaaagtgtcaaatttgat
tggccgaggattgtgctgaagatgaaccccactgcagtccactcaatacttgagcgggtg
acggctgaagatgacgagggcgctgaggaccattcccttgaagaggaagaggaggaaggg
gctgcccattcactgaaggatgtgtgtgactttgggaaaccagagccatcacccttttca
tcacgaagggtcatgtatgagaatgaagagatggtcatccctggtgatgttgctgaaatg
acagagttccaggaaaaaaccatgaacaactcccgcttcatccttgagttgtgtttcccc
aatgtgcaattagtgctccccggcaaggcattttatgaaaaactacacaacaggataaac
aatgacctgttgctgtgggagccgactgctccatctccagtggagacggtagaaagcatg
ccatatggagttggactctctgtcgccagtcagttgatcaacacttattccaaggacagc
ttcagccagttccgctctactggtcccgaggaggacagtggctcagaagaggagaccatg
cactattacttgcctgcatcagacctgaggtctcgcaagaagaaaaagcccaaagtccag
agcaagaccntccagagcctgttctctgtcatcatcagtgtcaaccatggcctggtggct
cttcaaactaatgctaagaaggaggataaaactgtactgaaaaacaaacatggcgaattc
tggctggaggtgaaaaatgctgtgttgttcagtgtgacgcagtacgaaggatataaagac
caacactacatctgcttccacaccagtaatatttgcatgtatcatcaaggacttgtggat
ggaggcacctctgtgtcagacgtcaagttgccatgcaggacacatccccactggttagag
ccaaccatctaccaatccgatacatctcctgagagagcctcaacaccctcagagggtatc
ggtcttgaggcccgcagcatggtgtctgttgctgtcaaaatctcatcacagaatgcagaa
agcaatgtcaaggaattcctggttgctgttggagtgagaggagccacactccagcacaga
gtggtctctcccggtctgggctggtatgaccagattgttgactttctgaatgtttccgat
gagcctgtgttgggttacgcccctcctacgtctgtcaccaccctacatttacacctgtgg
agttgctctctagactacagacctttttacctgccactcagatccctgttggttgtagag
acttttagcatctccagcagtgtgtctttagaccactattcctcaacactcagaatcatt
ttggacgaagcggctcttttcctctcagacaagagtaatgctctttctgtcaatctagtg
cgagattatgtgcaagtggtagacatgggaacattggagctgaggattacagctgtcaaa
ccgggagtggatggaaagttgtcggagcccagatttgagctgcgctgttccagtgacgct
attcacatcagaacgtgttcggactcctgtgctgccctcatgaaccttatccagtatgtt
gccagctatggagacttgctccccactgcagaaccagaggccaaacacagcagcactaca
caaagaaccaaggcggagtttcctagccggcccacatctcagaccctgttgctcgctgag
actgagcagcagatgttgcaggatctgatgagtgaagctatggaggagagtgatgggcag
catgcaccagggctggagcagaatggtgcacatgaggaacggaatcaagaccaagacccg
ccccgctcagacctattcttgttcccggatgagagtgggaattgtaaccaggattcaagc
cccacttacccgatgcttcactctcctcttatcactcctgtcccgaacctggctcaagag
acggatgacttttgtatcctggagactccaggttccagaggagagaatcttgatcaggag
cccgtggtaaagcagcttacctcagatcctgtggaaatcaaagatgattacttcaatcag
cctctagaggggagtgattccagccgtggagctatgaactttcccatcccagaggtgcgc
tacctcatcaaggagatctctgtcatctggcacctctatggtgggaaagactttgggagt
gccactttcacagcctctcctgctcgaagccgggggtctacacctcattgctccccctct
cagacaccagtcagacaggccaaggcttcaggacgggcaggaggtggaagaggaaggaac
cctgacgtcctgatggagatacagctcagcaaagtgagatttcagcacgaggtgtatcca
cagggccaggtggcttctggaccagcaacagaccagcctatctcccgacaggtgtttgtt
gtacaggacttggagattcgagacagactggctacttcacagatgaacaagttcctctac
ttgtattctagcaaggaaatgcccagaaaagcccattctaacatgttgacagtgaaggca
ctgcacatgtgtcctgagtcaggccaggctccccaggagtgctgtttgcgagtttccctg
atgcctcttcgcctcaatattgatcaggatgcactgttcttcctgaaggacttcttcaca
agtcttgctactgaagttgagtttttctcaccgcctgctcaagaagctgtctgtatttcc
acaaagaaagcagctgccccagagatctcctgcagtttctccaagcacaccaccagcagc
agccaggacccggctccaatcatctcagtgcctgctcagagacgtttgagccacaatggt
ttctccacatctggcagggaggaagtgaatgacaatgaagcctctgctccttctttcaca
gaccaaccaatcttctttagggagtttcggtttacctctgaggttcccattcgcttggat
tatcatggaaaacatgttgcaatggagcagggaacattcgcagggatcattatcgggttg
acacagcttaattgttcagagctgaaactgaggcgcttgtgctatagacaaggattattg
ggtgttgataagctattttcttacgcaataaacgagtggctaagtgacataaagaagaac
cagcttccaggactactgggtggtgtgggacctattcactctctggtgcaactagttcag
ggattcagggacttggtctggctcccaattgagcagtacaggaaagatggccggatagtc
cgtgggtttcagcgcggcacagcctcctttggaacgtctactgctatggctgctctggag
ctcaccaacaggatggtgcggaccatccaggcagcagctgaaacggcctacgacatggtg
tctccggtgcctgatgagagagacacaaagagggtcaaacggttctcccattacggactg
gctcatcagcctgttgacctgagagaaggtgtagccaaagcctatactgttgtaaaagag
ggcatcacagacacggcactgaccatctatgacacagccaccagggagcatgaacagcgt
gggatgacaggggcagtgggtggcgttctccgccagctgccaccagcagtcgtaaagcca
ctcattatggccactgaagccacctccaatgtcttgggtggaatgaggaaccagattcac
ccggacgcacggcaggaggagtctcagaaatggaggcagggcgaggagtaa
DBGET
integrated database retrieval system
