KEGG   Cyclopterus lumpus (lumpfish): 117725334
Entry
117725334         CDS       T09199                                 
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor syf2
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117725334 (syf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clum03041]
    117725334 (syf2)
Spliceosome [BR:clum03041]
 Complex B
  Other components
   Prp19-related factors
    117725334 (syf2)
 Complex C
    117725334 (syf2)
SSDB
Motif
Pfam: SYF2 AAR2_1st
Other DBs
NCBI-GeneID: 117725334
NCBI-ProteinID: XP_034381337
Ensembl: ENSCLMG00005003320
UniProt: A0A8C2WNA6
LinkDB
Position
22:complement(7341867..7346882)
AA seq 239 aa
MASCIEESATATGEEEHTETHASQNREARLRKFRELHFKRNEARKLNHQEVVEEDKRLKL
PSNWEAKKARLEWELAEDEKKKECADKGEDYHRVKLLEITAEDAERWERKKKKKNPDTGF
AGYAEAQFRQYQRLTKQIRPDMESYEKQREDCGVDFHPTSNSLIHGTHVPTKQGIDRMVE
DVEKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq 720 nt   +upstreamnt  +downstreamnt
atggcgtcctgtattgaggagtctgctacggccacaggagaggaggaacacacagaaact
cacgcctcccagaacagggaagccagactacggaaatttagagagttgcatttcaaacgg
aatgaagcgcgcaagctcaatcaccaggaggtcgtggaggaggacaagagactgaaactc
ccttcgaactgggaggcgaagaaagccagactggagtgggagctggctgaagacgaaaag
aaaaaagaatgtgctgacaaaggggaggactatcacagagtgaaactgctcgaaatcaca
gctgaagacgcagagcggtgggagaggaagaaaaagaagaagaacccagacacaggattt
gcaggttatgccgaggcccaattccgacagtaccagaggctcactaagcaaatccgacca
gacatggaaagctacgaaaagcaaagagaggattgcggcgtggacttccaccccacgtcc
aacagcctgatccacggcacccatgtccccacaaagcagggcattgaccgcatggtggag
gatgtcgagaaacagatagagaagcgggccaagtacagccgccgcagggcctacaacgac
gacgcagacatcgactacattaacgagaggaacgccaagttcaacaagaaggcggagcgc
ttctatggcaaatacacagcggagatcaaacagaacttggagagaggcacagctgtctag

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