Cyclopterus lumpus (lumpfish): 117725356 Help Entry 117725356         CDS       T09199                                  Name (RefSeq) aggrecan core protein-like   KO K06792   aggrecan 1 Organism clum  Cyclopterus lumpus (lumpfish) Brite KEGG Orthology (KO) [BR:clum00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:clum00535]     117725356    00536 Glycosaminoglycan binding proteins [BR:clum00536]     117725356    04091 Lectins [BR:clum04091]     117725356 Proteoglycans [BR:clum00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    117725356 Glycosaminoglycan binding proteins [BR:clum00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    117725356 Lectins [BR:clum04091]  C-Type lectins   Lecticans    117725356 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF hEGF I-set EGF_3 Motif Other DBs NCBI-GeneID:  117725356 NCBI-ProteinID:  XP_034381365 LinkDB All DBs Position 3:complement(27965974..27981486) Genome browser AA seq 1245 aa AA seqDB search MITRIVLLSVCLHAISAAFDYISTDPEDVLSVSIPLEEPQRPLLGSSLVLPCYFEDHTIP DPGAPTIAPLAHRIKWSLVTKENVTTVLVALGGQVRISESFLDRVHLVGYPSTSTDASIK ISELRSSDTGVYRCDVQHGIEDSHDTVHVQVQGLVFHYRAIMGRYTLTFEKAKAACAQNS AVVASLEQLQAAYEDGFHQCDAGWLSDHTVRYPIHETRVNCYGDKEELPGVRTYGVRNIN ETYDVYCYTEKMTGRVFYKASAGKFTYSEAVLACFNQRAQLATTGQLYMAWQGGMDVCNA GWLGDRSVRYPINVRRPQCGGGLLGVRTVYLHRNQTGYPLPESRYDAFCYTESLDEEGSG IIEEGSDVLSVTTVTQSPEVFFRRTTTDSEAVGELETQRPTVVDFPFTESPTGLPLPRPP NVTEFVIDLIEAATARPDIEREPSKGFVMSPTGVVFHYRSGSSRYAFTFIEAQLACQSVG ASIATPEQLKATYKAGYHQCDAGWLLDQTVRYPIVFPQMKCAGDLGDQPGVWSYGLRPAD ERYDVYCYIDGLKGEVFHVSSTEGFTYDEAASSCQEHNAVLASTGELYAAWKIGFDNCHA GWLVDRSVRYPINKPRADCGAGKPGVHTVYSHPNQTNVSELDARFDAYCFRADFVLIANE TGLNITDIQEALLNLTSITDLLRPGGPFIVSPIPVETSGSGSDSGSADISLGSSVDGASG GHSGDLSGSGDLSGSGNTGISGDLSGSGHLYGSGELSGSGQLPGSGDLSGSGVLSGSGDL SGSAIAELPSGESGLSSTDSSGTALSGDGSGITVAFSGIDSIFSGEGSASGGLQEAGEGS SGIFIFPSSEVGSGELSGSGDLSGSGSGSDFSSGESGSFLDGSGMSSGFITGQDFSGLSG FPSGFSSGSASGQSGELSGGGEAQILLDDQELIDGSTPVTHKEYELGGGLLAFSGSGDIS GSGILSGSESGFTPCEPNPCGAASCTVEEEVALCNEVDVCHPNPCANGATCVESADSYKC LCLPSYGGERCEIDEQQCEDGWTKFQGNCYLHFSDREMWLEAEQRCRDLNAYLVSVVTPE EQDFVNSNAQDYQWIGLNDKTVENVFRWVDGTPLQYENWRPNQPDNYFHTGEDCVVMIWH ESGQWNDVPCNYHLPFTCKKGPVSCGAPPQVENARVFGNKREEFPVNSIIRYQCNSGFRQ RHLPTVRCKADGQWEKPQVQCIDVKCRQRLHRRSSRHLTAGSELH NT seq 3738 nt NT seq  +upstreamnt  +downstreamnt atgataacgaggattgtgttgctgtctgtgtgcctccatgccatctcggcagcatttgat tacatctccacagacccggaggatgtgctgagtgtgagcattcctctggaggagccacag cgccctctactgggctcctcgttggtgctaccgtgttactttgaggaccacacgatccca gacccgggagctcccaccatcgctcccctcgctcatcgcatcaaatggagcctcgtcacc aaagaaaatgtcacaactgtcttggtggccttggggggacaggtgcgcatcagcgagagc ttcctggacagagttcacctggtgggctacccctcgacttccacggacgctagcatcaag atatccgagctgcggtccagtgacacaggagtctaccgctgtgatgtccagcacggcatc gaggacagccacgacacagtccatgtgcaggttcaaggtctggtgttccactaccgggcg atcatgggccgctacactttgacttttgaaaaggcgaaggcagcatgcgcccagaacagt gccgttgtggcttcactcgaacagcttcaagcggcctacgaggatggattccaccagtgt gacgccggctggctctctgaccacacagtcaggtacccgatccatgaaactcgtgtgaac tgctatggtgacaaagaggagctgcctggggtcaggacatacggagtgaggaacatcaat gagacttatgatgtctactgctacactgagaagatgacaggcagagttttctacaaagct tctgcaggaaagttcacctactctgaggcggtgttggcgtgcttcaatcagcgagctcag ttggccaccactggtcagctctacatggcctggcagggtgggatggatgtctgcaacgcc ggctggctgggagacaggagcgtccgctaccccatcaacgtccgtcggccgcagtgcgga ggaggtttgctgggggtgcgaactgtttacctccacagaaaccagacaggatacccactt ccggagtcccgctacgacgccttctgctacacagagtccctcgatgaggaaggttcgggc atcatagaagagggaagcgacgttctgagtgttaccacggtgacacagagcccagaggtg ttcttcaggcggacgaccacagacagcgaggcagtcggagagctggagactcagcggcct accgttgtggacttccccttcacagagagtcctaccgggctgccactgcctcggccgcca aatgtcacagagttcgtcattgacctgatagaagcagccaccgctcggcccgatatagaa agagagcccagcaaaggctttgtgatgtctccaactggtgtggtcttccattatcgctca ggctccagccgatatgccttcaccttcattgaggcccagctggcctgccagagtgttggc gcctctatcgccacgccagagcaactgaaggctacatacaaggctggatatcatcagtgt gatgcaggatggttactggaccagactgtaaggtaccccattgttttcccacaaatgaag tgtgctggagatctgggggatcaacctggagtttggtcatatggtttgaggccggcagac gagagatacgacgtgtactgctacattgatgggctcaaaggtgaggttttccatgtgagc tccactgaaggtttcacctatgatgaggctgcttctagctgtcaagagcacaacgcagtg ctggcttccaccggagagctctacgcagcctggaagataggttttgacaactgccacgct ggctggcttgtggatcgtagcgtccgctatcccatcaacaaaccccgcgctgactgtgga gctgggaaaccaggagtgcacactgtgtactctcaccccaaccagaccaacgtctctgaa cttgatgccagatttgatgcatactgtttcagagcggattttgtacttattgcaaatgaa actggactgaacattacagacattcaggaggccctccttaacttaacatcaatcactgat ttgttgaggcccggtggtcctttcatcgtttcacctatacctgtggagacttcaggctct ggctctgactcaggctcagcagacatcagcttagggtcttcggtcgatggtgcctctggg ggtcactctggagacctgtctggatctggagacctgtctggttctggaaacacggggatc tctggtgatctgtctggttctggacacctatatggttctggagagttgtctggctctgga caactgcctggttctggagacttgtctggttctggagtcttgtctggttctggagacttg tccggcagtgccattgctgagctgcccagtggagaatcaggtctcagcagtacagattct tctggaacagctctcagtggagacggatccggcatcaccgttgcattttcgggcattgac agcattttctctggagagggctcagcttcaggtggactccaagaagctggagagggaagc tcagggatctttatcttcccttcatctgaagtaggctctggagagctcagtggtagtggg gacctgtctggatctggatctggatctgatttcagctctggggagagtggctctttctta gatggctcaggcatgtcgtccggtttcatcaccggacaggacttttctgggttaagtggg ttcccatccggattctcctctggaagtgctagtggacagtcaggagagctttctgggggg ggggaggcacagatcttactggacgatcaagaactgatcgatgggtccacccctgttacc cacaaggagtatgagcttggtggaggccttctggcattcagtggctctggagacatttcc ggatctgggattctcagcggctctgaaagtggttttaccccatgtgaacccaacccctgc ggtgctgcttcatgcacagtagaggaagaggttgctctgtgtaacgaggtagatgtgtgc catcccaacccatgtgccaatggagccacctgtgtggagagcgcagactcttacaaatgc ttatgcctgcccagctacggaggggaacgctgtgagatcgacgagcagcagtgtgaagac ggttggacgaagtttcaggggaactgctacctgcacttctccgacagggagatgtggctg gaggccgagcagcgctgccgggacctgaacgcctacctggtcagcgtagtcacgccagag gagcaagactttgtcaactcaaacgcacaggactaccagtggatcgggttgaatgacaag actgtggagaatgttttccgctgggtagacggcactccactgcaatacgagaactggagg ccgaaccagccggataactacttccacactggagaagactgcgtggtgatgatctggcat gagagcggccagtggaacgacgtgccctgcaactaccacctgccctttacctgcaagaaa ggcccagtgtcctgcggcgctccgccacaggtggagaacgcccgcgtgtttggtaacaag agggaggagttcccggtgaactccatcatccggtatcagtgcaactccgggttcagacag cgccacctgccgacggttcgctgtaaagcagacggccagtgggagaagccccaggtgcaa tgtatcgacgtgaaatgcagacaaagactacatcggaggagcagcaggcacctgacagcc ggcagcgagcttcactag

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