Cyclopterus lumpus (lumpfish): 117725389
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Entry
117725389 CDS
T09199
Symbol
arhgef10
Name
(RefSeq) rho guanine nucleotide exchange factor 10
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117725389 (arhgef10)
03036 Chromosome and associated proteins [BR:
clum03036
]
117725389 (arhgef10)
Membrane trafficking [BR:
clum04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117725389 (arhgef10)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117725389 (arhgef10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
117725389
NCBI-ProteinID:
XP_034381413
Ensembl:
ENSCLMG00005011443
LinkDB
All DBs
Position
22:8546271..8590768
Genome browser
AA seq
1443 aa
AA seq
DB search
MDVEDFPPPPPEMLADSVPFADEEEGETFDFDDSGDDIPEADRLPPAPLAPLAPRINDQG
QNQTVVSHPEGHLTSPDPPAPSATSDTAPSSADTTVATSRSSTAGGATAEGEGTDDTETD
LPPPPPPPLVDDAETDPGRTGSEGQDASTDAPHPPQAVPRSTSQGKANPYSVIDITPLQL
QQLEQQHEHPHGPSSAPMEPMEPEGESQDIPTSPVGIASAYSVPVPCGYATPSGVPLITP
AYTTPVIIRHLSVDEDVTVVGTGNTSADSVFSEEYPPIREEDALTKWASDPANTAWMENP
DEVIYDDVPRENSDSNTDPDEMIYDDVELGEDGGCNSSLDNGWSSSEFESYDEASDGEGR
PENGLPHAFMRGKPPQKKTHLSQDLTRLKEHYEKKMKDLMANTVGTVELQQLKQKHEQKM
QKLVKAAKEGTKDGLEKTKAAVKKGRSFIQTKSFCHERKSAGFEDEESELFIEVDCFNVE
PVLCPAPAGLSQQQLVRRCILGSILESEKNYLDALKRILEQYEKPLSQLEPRLLSDRKLK
MTFYRVREILQCHFLFQIALASRVAEWDSLEMIGDVFVASFSKSMVLDAYCEYVNNFSTA
MAVVRKTCASKPGFLEFLKHRQETSSDRMTLYGLMMKPIQRFPQFILLLQDMLKNTPVGH
ADRLSLQMALAELETLAEKLNEKKREADQRCEIRHIAKAMNERYLNKLLSNGSRYLIRSD
DMVETVYNERGEIIKTKERRLFLLNDVLMCATPNIRCQDGSGSGSGNAPLDQKFLLKWSV
PLSFVEVLEFGSSEDMADNSRYPTSHSGEKVVINAKPNKLYMGPGQLYQDLQNLIHDLSL
VNQISSMISSLKGNYQNVNPTVAHDWVSGLQRLILKKEEEIRAADQCRIQLQLPGKHDKS
GKPTYFSAVFNTLSPAIKQSWISNLQMAKLSLEEDNLQGWFFAEEDGNQIKKQKHPLLLR
QMPVVMSKLQEFKVECAVHNPEPHINTESTADTPVVGHGCVWVASCTNQMGQISIVAMQS
SSPKVTECFNVESRILCMAYVPAEQLQENAENIPENNHAAKASDSPSVCLGMEEGSIIVY
KSSQRSKKVRLQHFFTPDKSTVTSLVCKRLCLYVGLVSGSVAVYSRSQDGLWSSEKPTVL
KLGVLPVKAMLAVEDHIWASTGGQVFIISAHTHCVERQLEAHQEEGMVVSHMVVAGVGIW
IAFSSGSTLRLFHTETLEHLQDINIATPVHNTLPGNQRVSVSSLLVCHGLLLVGTNLGVT
VALSVPRLQGIPKVTGRGMVSLHAHNGPVKFLSVAAAVCNRPSGPSSSPPPASVQPPETD
DGEDTQPPSDSAPTAPQGRGVWLGEAGCSNMALQDSLSSSSCGSLAPSQGSLEHGPEDGA
LYDVLHDPAHHQRGRRTSKVDVSSLLVVSGGLGHRRVNKKTKQSRHEDTTSTIMIWQIPL
LNM
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggaagactttcctcccccgcctcctgaaatgttggcagacagcgtgcccttc
gcagatgaagaagagggggaaacctttgactttgatgacagtggtgatgacatcccggag
gctgaccgcctaccccctgcgcctctagctcctctggccccacgcatcaatgatcaggga
cagaaccagacggtggtcagtcaccctgagggccatcttaccagcccagaccccccagca
ccttccgccacatccgacacagctccatcatcagcggacacaacagttgccacaagcaga
tcctccacagcaggtggagcaacagcagaaggagaggggactgatgacacagagacagat
ttaccaccacctccaccccctcctcttgttgatgacgcagagacagatcctggaagaaca
ggcagtgaaggccaggatgcgtccaccgatgcccctcaccctccacaggccgtccccaga
agcacctcccagggcaaagccaacccatactctgtgattgacatcactcctctccaactg
cagcagcttgagcagcagcatgagcatccgcatggaccctcctctgctccaatggagccc
atggagccagagggagaatcccaggatatccccaccagccctgttggcatcgcttcagca
tactcagtcccagtgccctgtggctatgcaaccccctctggagtaccgctcatcacacca
gcgtacaccacacccgtcatcattcgacacctatccgtggatgaggatgtcactgtggtt
gggactggcaacacctctgcagacagtgttttcagtgaagagtatccacccattagagaa
gaggatgctttgactaaatgggcatccgatcctgccaacactgcatggatggaaaatcca
gatgaggtgatttacgatgacgtgcccagagagaactctgactccaacacagatccagat
gagatgatctatgatgacgtggaactcggcgaggacggcggctgcaacagctccctcgac
aatggctggagctccagcgagtttgaaagctacgacgaggccagcgacggggaaggtcgc
cctgagaacggcctgccacatgccttcatgagaggaaagccaccccagaagaaaacccat
ctctctcaagatctgacacgcttgaaagaacactatgagaaaaagatgaaagatctaatg
gcaaatacagtgggaacggtagagctgcagcagttaaaacagaaacacgagcagaagatg
caaaagctggtgaaggcagctaaggaagggaccaaagatggacttgagaaaaccaaagct
gcagtgaagaagggacgctctttcatccaaaccaagtcattctgtcacgagaggaagtcg
gccggtttcgaggatgaggagtctgaactcttcatcgaggtggactgtttcaatgttgag
ccagtgttgtgtccggcaccggcgggtctttcacagcaacagctggtgagaagatgcata
ttgggatcgatattggagagcgagaagaactatcttgatgcactgaaaaggatattagag
caatatgagaagcccctgtcccagcttgagccgaggctgctgagcgacaggaaactgaag
atgaccttctatcgtgtgcgtgagatcctgcagtgccacttcctgttccagatcgccctg
gcgagccgcgttgctgagtgggacagcctagagatgattggcgatgtctttgttgcatcg
ttctcaaagtccatggtgctggatgcctactgtgagtatgtgaacaacttcagcaccgca
atggccgtggtcaggaagacctgcgcctccaaaccgggcttcctggaattcctcaagcac
cgccaggagaccagcagtgaccggatgactttgtacggcctgatgatgaaacccatccag
agattcccacagttcattctgctccttcaggacatgctgaagaacacaccagtgggccac
gcagaccgtctgtccctgcagatggccctggccgaactggagacattggcagagaagctc
aacgaaaagaagagggaagccgaccagcgctgtgagatccgtcacattgcaaaggccatg
aacgaacgctacctcaacaagcttctgagtaatggcagccgctacctgatccgctcagac
gacatggtggagacggtctacaatgagcgtggtgagatcatcaaaaccaaggagagacgc
ctcttcctgctcaatgatgtcctcatgtgtgccacacccaatatccggtgtcaggatggc
agtgggagtggcagtggcaatgccccactcgaccagaagttccttctcaagtggagtgtg
cctttgagcttcgtggaagtgctggagtttggctccagcgaggacatggccgacaacagt
cgctacccaacatcccattctggggagaaggtggtcatcaacgctaagccaaacaagctg
tacatgggccccggtcagttgtaccaagatctgcagaacctaatccatgatctcagcctt
gtcaaccagatctccagcatgatcagcagcctcaagggcaattaccagaatgtgaacccc
acagtggcccatgattgggtatcaggtctccagaggctgatactgaagaaggaggaggag
atcagggcagctgaccagtgtaggatccagctccagctgcctggcaaacatgacaagtcg
ggcaaacccacctacttcagtgcagtgttcaatactctcagcccagccatcaagcagtca
tggatcagtaacttgcagatggccaagctgtctctcgaggaggacaacctgcagggctgg
ttcttcgcagaggaagatgggaatcagatcaaaaagcaaaaacaccctctcttgcttcga
caaatgcctgttgtgatgtcaaaactacaagagttcaaggtggaatgtgccgttcataac
ccggagccccacatcaacacagagagcacagcagatactcccgtcgtgggccatggctgt
gtctgggttgcaagttgcaccaaccagatgggccagatatccatcgtggccatgcagagc
tccagcccgaaggtgactgagtgtttcaatgtggagtcccgtatcctctgcatggcctac
gtccctgcagaacaacttcaggagaatgcagagaacattcctgagaacaaccatgcagca
aaggccagtgattctcccagtgtctgtctgggaatggaggagggcagcatcattgtgtat
aagagcagccaacggtccaagaaagtccgcctgcagcatttcttcaccccagacaagtcc
accgtcaccagcctggtctgtaagagactgtgtctgtacgtcggcctggtcagcggctct
gtggcggtctactccagatcacaagacggtttgtggagctccgaaaagcccacggtgctg
aaactgggggtcctcccggtgaaggccatgctggctgtagaggaccacatctgggcttca
acaggtggccaggtcttcatcatcagtgctcacacacactgtgtggagaggcagctggag
gcccaccaggaagagggcatggtggtgtcccacatggtggtggctggggtgggcatctgg
atcgccttcagctcaggttccactctgcgccttttccacaccgagaccctggagcacctg
caggacattaacattgccacaccagtccacaatacactacccggaaaccagagagtgtca
gtgagcagtctgctggtctgtcatggtctgctgctggtagggaccaacctgggagtgact
gtggccctctctgtccccagactgcaggggatccccaaggtcacaggtcggggtatggtg
tccttacacgctcacaacggtccggtcaagttcctcagcgtggctgcggcggtgtgtaac
cgtccctctggtccgtcatcctccccccctcccgcctccgttcagccaccagagacagat
gatggggaggacacccagcccccctcagattcagcccccaccgcccctcagggacggggc
gtgtggctgggagaggcgggctgctccaacatggctctccaggactccctgtcctcctcg
tcctgcggctccctagcaccttcccagggctctttggagcacgggcccgaggacggggcc
ctctatgacgtgctccacgacccggcccatcaccagaggggccgtcggaccagcaaggtg
gatgtcagctctttgctggtggtgtccggaggtctcggccaccgcagggtcaacaagaag
accaaacagtctcgccacgaggacaccacctctaccatcatgatctggcagatccccttg
ctcaacatgtga
DBGET
integrated database retrieval system
