Cyclopterus lumpus (lumpfish): 117725417
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Entry
117725417 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 2-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117725417
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117725417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
117725417
NCBI-ProteinID:
XP_034381456
LinkDB
All DBs
Position
22:complement(10053245..10129107)
Genome browser
AA seq
2082 aa
AA seq
DB search
MDRVGFAVLMVLAVALLRIGDSHKDTTGGKKEGAVAGRSQQSRVRSQGHSPWRPEHGASS
GPSGESSPGTDTVRTRFRVPRATSSQGDGRHISRAGPARAADASREILVSPPRDGALRTA
RHPSSQQHRTRVNLRQSSKPNSASTRRLAGPNVCGGQQCCSGWALASGTNRCIKPDCQPP
CQNRGSCSRPQTCVCRSGFQGPRCEEVTPEQVYIRDGGALKRVQPGTNPFQKDQPRRRPS
ERQAIDTTKVQTPRPATPRQPVTQVRRGPPDSSPQQTGTSRTVKRYPSSSGPITSNALPN
GNGHGSEHRNWHGHRNGHRNGHFTHRPSSDSQLHGKFNNALSPAGANLTSNLDRIKIVFT
PMLCRRVCSGGHCYNSCEKGDITTVYSENSQQQQKQQQQQQQQQRQPPKNQGFRLFFCQI
PCLNGGRCIGRDLCWCPSNSTGKFCHLPAPPPARPTPHNKDASHQEPKSPLHSMYTLPLS
NQQVSLHPSLVNVHIQHPPDAEVQIHQVAWVQPGQRPGHRRWGLNSVQQRSQPGNGMNPT
NDHSSRHPHTSGNXRNNQARTHNHQNGHVGRCFQETVDGQCGKPLPGLTKQDDCCGSVGA
SWGLNKCQKCPTKPAYAVITNGQVECPKGFKRMNLTHCQDINECLLPGLCKNAECLNTKG
SYRCTCKLGFLLDTDRSHCVSDKAVSDQRAFCYRSVSAGTCSLPLAQHITKQICCCSRVG
KAWGPGCDRCPLHGSDHFKEICPAGHGYTYSRSDVQISVRQLEEEDLQSTGVSREEQSPT
FPHPPSSLPWLPQPPQVPPYPEYPETPQAPRYPLTPLQPLHPTHPAKETLMQPEDVEILS
PPAVVTDSPLKYPEASPDSSIINLRPTSKDTTQTDSATGIDKCANAPAICGPGKCVPVQT
GYTCHCEPGFKLSALQTNCIDVDECDEDPCEGKGRCLNSYGSYTCQCHSGYSQVITQNRK
FCQDINECSMPNKCQNGKCVNTEGSYTCECSSGYAKSWRGQCEDVDECRDPSSCPNGVCV
NTLGSFQCQACGPGYRPVDERCVDVNECFNQTVCGRGRCVNTEGFYRCNCFQGYKLSPDN
VCQDVDECELPGVCLHGRCVNLDGTHKCTCNHGYQVTSDSKACEDVNECATVNVCPAGIC
INAAGSYTCQNCRPGFGPSADGLRCEDMNECAQGDLCLGGVCANTEGSYTCTRCKAGYRV
SQDRQRCEDVDECQSLSTCANGICLNSEGSYICENCPTGYRVSYDGELCEDIDECALPTT
CPKGTCTNTEGSFTCIVCQPGFRVSDEGQHCDDVDECLVANRCPSQLCLNTPGSYTCRSC
GAGLRLSQDGYSCEDIDECQRPGVCPTGVCTNTEGSFACMACDPGFTVAPNGLSCEDENE
CEDPGLCVGGQCTNIIGSYNCLCPAGLEMVDGTSCRDINECLTIVGICGEADCLNTKGSY
ICICPNGYTTIDGRTGCQDVDECSKDNVCIRGECLNTDGSFMCLCEAGFKFNADTADCED
QNECKDFGGSVCGTWRCENTIGSYRCFMGCQPGIDGEDTTDCDIDECVNETICGNYGFCE
NTDGSFRCQCDQGYTNPPGDMSKCVDVNECEMSLALCGEALCENFDGSFLCICPNDNEEF
DPITSQCRSLADVDPTSAARVPPSAPSTEERKECYYNLNDANFCDNVLSRNTTKQECCCT
VGAGWGDDCEIHACPLQGRDDYNQLCPHGSGLLPLPVPSTQNLGEQRPYIDANECEMFGS
DICKNGQCSNLFSTYTCYCRSGFYYDNIRLECVDYDECGFGNACEDGECVNTAGSFNCFC
SPPLVLDSTHQRCIGLNATEETLEPGHDVHMDICWQHLEGDNICSQPLQGRRSTYTECCC
LWGIAWSGQCAFCPRKDSDDYAVMCNLPRRGETDSLRERPGYEYGLEGPEEPFVPPYWDS
YGGPAGPYDIPDGIPLFNDNDYSVQQPPSRVPIPRPREQQPRPVDSYADRYDGFEGLRAE
ECGILNGCENGRCVRVREGYTCDCFDGYELDLNKMACLDINECEDISDKVPLCQNGQCTN
TEGSYKCTCLPGFLASAEPHKCIPEIPAIPEIPESGLVETGN
NT seq
6249 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtgtgggattcgctgttttgatggttttggctgttgcactgctgcgaattggt
gacagtcacaaggacacaacaggtgggaagaaagagggtgcagtcgccgggcgcagtcag
cagtcccgggtgaggagtcaaggtcactcgccatggagaccagagcacggcgcatcctct
ggaccatccggtgaaagttctcccgggaccgacacggttaggactcgattccgagtgccg
agggccacatcatcccagggggacggcaggcacatatccagagcagggccggctcgtgct
gcagacgcatcccgggaaatcctcgtctctccgccgcgggatggtgcgctgcgcaccgcc
agacacccgagcagccagcagcacagaaccagagtgaacctcaggcagagcagcaagccc
aactctgccagcacgaggagacttgctggacctaatgtctgtgggggtcagcagtgctgc
tcaggctgggctttggcatcaggaaccaatcgctgcataaaacctgactgccagcccccc
tgccagaaccgtggctcctgcagccggccacagacctgtgtgtgtcgctcaggcttccag
gggccccgctgtgaggaggtgactccagagcaggtgtacatccgtgatggaggcgccctg
aagcgcgttcaaccggggaccaaccctttccagaaagaccaaccacggagaaggccctcg
gaaaggcaggccatcgataccaccaaggtccagaccccacgacctgcgacccccagacag
cctgtgacccaagtgagacggggaccccctgactcctcccctcaacagactgggacctcc
cgcactgtgaaacgttatccatcatcctctgggcctataacgtccaacgctctaccaaat
ggcaacggccacggcagtgaacacaggaactggcatggacacagaaatgggcatcgcaac
gggcacttcacgcacaggccgagcagcgacagccagctgcacgggaagttcaacaatgca
ttatcacctgcaggggcaaacctcacctccaacttggaccgcattaagatcgtcttcacg
cccatgctgtgccgccgggtgtgcagcggcgggcactgctacaacagctgtgagaagggc
gacatcaccacggtctacagcgagaactcgcagcagcaacagaaacagcagcagcagcag
cagcagcagcagcgtcagccgccaaagaaccagggctttcgactcttcttttgtcagata
ccctgtcttaatggaggccgatgcatcggcagggacctgtgctggtgtccatcaaattca
acaggaaagttttgtcacctgccagccccgcctcctgccagacccacccctcacaacaag
gatgccagccaccaggaaccaaaatctcccctccactccatgtacactctaccactgtcc
aatcagcaagtgtctctccatccatccttggtgaacgtccacattcagcaccctccagat
gctgaagtccagatccaccaagtagcttgggtccagccaggacagagacccggccaccgc
agatgggggctcaactcggtccagcagcgctcccagcctgggaatggaatgaaccccacc
aatgaccatagcagcaggcacccacacaccagtggaaacnngaggaataaccaagccaga
acgcacaaccatcagaacggacatgttgggagatgctttcaagagacagttgatggacag
tgtggcaagcctctgccaggcctaaccaaacaggatgattgctgtggaagtgtgggcgcc
tcctggggtctcaacaagtgccaaaagtgtccaaccaaaccagcatatgcagtgattacg
aatggacaagtggaatgtcccaaaggttttaaacggatgaatctcactcactgtcaagac
atcaacgagtgcctgttgccggggctctgtaagaatgctgaatgtctcaacaccaaagga
agctacaggtgcacgtgtaaactgggcttcttgttggatactgacaggagccattgtgtc
tcggacaaggctgtgtctgatcagagggcattctgctaccgatcggtgtcagcaggcaca
tgctccctgccgcttgctcaacacatcaccaagcagatctgctgctgcagccgcgtgggc
aaagcctggggccctgggtgtgatcgctgtcctttgcatggatcagaccatttcaaggag
atctgcccagctggtcatggatacacctactcacgctctgatgtacagatttctgtgaga
cagctggaggaagaagatctgcagagcacaggagtgtcacgggaggagcaaagccccact
ttccctcatcctccatcctctctcccctggctgccccagccaccacaagtgcccccatac
cccgagtaccctgagacaccacaagcaccccggtaccctctgactcctctgcagcctctc
catcccactcacccagccaaagagacacttatgcagccggaagatgtggaaattctgagt
ccgccagctgttgtgactgactcaccactgaaatatccagaggcttctccagactcctca
atcatcaacctgaggccaacttcaaaggacacaacccaaacagactcagccactggtatt
gacaagtgtgccaatgcccccgccatatgtgggcctggtaaatgtgttcctgtgcagacc
ggctacacctgccactgcgagccagggttcaagctcagtgcactgcagaccaactgcatt
gatgtggatgaatgtgacgaggatccgtgtgaagggaagggccgctgtttaaacagctat
ggctcctatacctgtcaatgccacagcggctacagccaggtgatcactcagaacaggaag
ttctgtcaagacattaatgagtgcagcatgcccaacaagtgccagaatggcaaatgcgtc
aacacagaaggatcttacacctgtgaatgcagcagtggctacgccaagtcttggagaggc
caatgcgaagatgtagatgagtgcagagatcccagctcctgtcccaacggtgtctgcgtc
aacactcttggctccttccagtgccaggcctgtggcccggggtacaggccagttgatgaa
agatgtgtggatgtaaacgagtgcttcaaccaaacagtgtgcggtcgtggtaggtgtgtc
aacacagagggcttctataggtgcaactgtttccaaggatacaaactctcaccagacaat
gtttgccaagatgtggatgagtgtgagctccctggagtttgtctacacggccgctgtgta
aatttggacggcacccacaaatgcacctgtaaccatggttaccaagtcacctcagacagc
aaagcctgtgaagatgtcaacgagtgcgcaactgttaacgtgtgccctgcgggaatttgc
atcaacgcagcaggttcatacacttgccagaactgcaggcctgggtttggtccgtcagct
gatggactcagatgtgaagatatgaatgagtgtgcccagggggatctgtgtcttggtgga
gtgtgtgccaacacggaggggtcctacacctgtaccagatgtaaggctggctacagagtg
tctcaagaccggcagaggtgtgaagatgttgacgagtgccagtccctgtctacctgtgcc
aacgggatatgtctgaactcagaaggctcttacatatgtgagaactgccctacagggtac
agagtatcttatgacggggagctctgtgaagatattgatgagtgtgcgctgcccactaca
tgcccgaagggaacatgtacgaacacggagggttccttcacatgtatcgtctgtcaacct
ggttttagagtctctgacgagggacaacactgtgatgatgtagatgagtgcttggtggcg
aacaggtgcccgagtcagctgtgcttgaacaccccaggatcctacacctgcaggagctgt
ggagctggtctgcgactgtctcaggacggctacagttgtgaggacattgacgagtgccag
aggccaggtgtatgccccacgggtgtttgcaccaacacagagggctcctttgcctgcatg
gcctgtgacccaggcttcacagtggctcccaacgggctctcatgtgaagatgagaatgag
tgtgaggaccccggcctctgtgtgggaggccagtgcaccaacatcatcggttcctataac
tgcctctgccctgctggtctagagatggtggatgggacgtcttgcagagatatcaatgag
tgtttaaccatcgtgggaatctgcggagaagctgactgtctgaacactaagggctcctat
atatgcatctgtcctaatggatataccaccatcgatggaaggactggctgccaagatgtg
gatgaatgcagtaaagacaatgtgtgcatccggggtgagtgtctgaacactgatggctct
ttcatgtgcttgtgtgaggcgggcttcaagttcaacgctgacacggctgactgtgaagac
cagaatgagtgtaaggactttgggggctcagtgtgtggtacctggcgctgcgaaaacacc
attggctcctaccggtgcttcatgggctgccaacctggcatagatggagaagacaccaca
gactgtgatattgacgagtgtgttaatgaaaccatctgtgggaactacggcttctgcgag
aacacagacggctctttccgctgccagtgtgaccaaggctacaccaacccgccaggagac
atgagcaaatgtgtcgacgtgaacgagtgcgagatgagcttggcgctgtgcggggaggcc
ctgtgtgagaacttcgatggcagcttcctgtgcatctgccccaacgacaatgaggaattt
gatcccatcaccagccagtgccgctccctggctgatgtggatccgacatccgctgctcga
gtccctccgtctgctccctccactgaggagaggaaagagtgctactataacttgaatgac
gccaacttctgtgacaacgtcctgtctcgcaacaccaccaagcaggagtgctgctgcacg
gtgggggccggctggggggacgactgcgagatccacgcctgtcctctccaaggaagagat
gattataaccagctgtgcccgcatggcagtggattattaccgctgcctgttccctctaca
caaaatctgggagaacagcgcccttacatagatgcaaacgagtgtgagatgtttggatca
gatatctgtaagaatggacagtgttcaaatctcttttctacttatacctgctactgccgc
tctggcttctactatgacaacatccggcttgagtgtgtggattacgatgagtgtgggttt
ggaaacgcctgtgaagatggagagtgtgttaacacggccgggtctttcaactgtttctgc
agtcctccactagtcctggacagcacacaccagcgctgcatcggcctcaacgccacagaa
gaaactctcgagccaggtcacgatgtgcacatggatatttgctggcagcatcttgagggg
gacaacatctgctcacaacccttgcagggacgcagaagtacatacaccgaatgctgctgc
ctgtggggcatcgcctggagcggacagtgtgccttctgtcccaggaaagactctgatgac
tacgcagtgatgtgcaaccttcctcggagaggagaaacagacagtctgcgagagaggccg
ggatatgagtacggtcttgagggcccagaggagccttttgttcctccgtactgggacagt
tatggcggccctgcaggaccctatgacattcctgatggcattcctctctttaatgacaat
gactacagcgttcaacagccaccttcccgtgttcctattccacgaccacgagagcagcag
ccacggccagtggattcctatgctgatcgctacgatggctttgagggtctccgggcggag
gaatgcggaattctgaacgggtgtgaaaacggtcgctgcgttcgtgtgcgagagggctac
acctgtgactgcttcgacggctacgaacttgacctgaacaagatggcctgtctagacata
aacgagtgtgaggacatcagcgacaaggtgcccttgtgtcagaacgggcagtgcacaaac
acagaggggtcgtataagtgcacctgtttgccaggcttcctggcctccgcagagccacac
aaatgcatcccagagatcccagcgatcccagagatcccagagtctgggcttgtggagaca
ggaaactga
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integrated database retrieval system
