Cyclopterus lumpus (lumpfish): 117725470
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Entry
117725470 CDS
T09199
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a isoform X1
KO
K09382
paired box protein 1/9
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117725470 (pax1a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117725470 (pax1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
117725470
NCBI-ProteinID:
XP_034381547
Ensembl:
ENSCLMG00005009310
UniProt:
A0A8C2XH10
LinkDB
All DBs
Position
22:7852330..7857246
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AA seq
366 aa
AA seq
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MEQNYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIREYKQGDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNQYESSKQASAQAGLSYNHMYPYSYPNMSPTGTKMGNPPGVPM
TAGHMSISRAWPSAHTVSNILGIRAFMDPAAIAGMDGYPPKMEEWSSVNRAAFPAAHTVN
GIDKSAIDADIKYAQPSSTLSSYVSACAYSPTNQYGVYSGPAGGYVAPGHHHWQPQSPVL
SHPGGGMTGMHAGEIHSPMTFKHQAREGDRKPANPLSKQQHQQQQQQQQHGDLNSVHGLS
LPTSSS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaactatggagaggtgaaccagttaggcggcgtgttcgtcaatgggcgaccg
ctgcccaacgccatacggctgagaatagtggagctggctcagctcgggatcagaccctgc
gacatcagccggcaactccgagtctcgcacggctgcgtgagcaagattttggcgaggtac
aacgagacgggctccatcttacccggagccatcggtgggagcaaaccacgggtcacgacg
cctaacgtggtgaaaaacattagggaatacaaacaaggcgaccctgggatctttgcctgg
gagatccgggacaggcttttggcagatggagtttgtgacaagtacaacgtcccgtcggtg
agctcgatcagcaggattttacgcaacaagattggaaatctctcccagcccaaccagtat
gagagcagtaagcaagcctccgcgcaggccgggctctcctacaaccacatgtacccctat
tcctaccccaacatgtcgcccactggcactaaaatgggcaaccctcctggagtaccgatg
acggctggacatatgagcatatccagggcctggccctctgcacacaccgtcagcaacatc
ctcggtatacgagcctttatggatcccgcagccattgctgggatggacggatatccacca
aaaatggaagagtggagtagcgtcaacagggcagctttccccgcggcacacacggtcaac
gggatcgacaaatcagcaattgacgcagacataaaatacgctcagccctcctcgacactg
tccagttatgtctcggcgtgtgcttactctcccaccaaccagtacggggtgtacagtggg
ccagcaggcggctacgtggccccaggccaccaccactggcagccgcagagcccggtcctg
tcccatccaggcggcgggatgaccggtatgcacgcaggggagatccactcgccgatgacc
ttcaaacatcaggcacgagagggagacagaaaaccggccaatcccctgagcaagcagcag
catcagcagcagcagcagcagcagcagcatggagacttgaacagtgtgcatggactcagt
ctccctacgtcatcatcataa
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integrated database retrieval system
