Cyclopterus lumpus (lumpfish): 117725635
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Entry
117725635 CDS
T09199
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
KO
K10752
histone-binding protein RBBP4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03082
ATP-dependent chromatin remodeling
clum03083
Polycomb repressive complex
clum04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117725635 (rbb4l)
03083 Polycomb repressive complex
117725635 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117725635 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117725635 (rbb4l)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117725635 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
117725635 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
117725635 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117725635 (rbb4l)
PRC2.2
117725635 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
117725635 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117725635 (rbb4l)
Chromatin remodeling factors
NuRD complex
117725635 (rbb4l)
NuRF complex
117725635 (rbb4l)
NuRF complex (fruit fly)
117725635 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_RIG_1st
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
MIOS_WD40
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
117725635
NCBI-ProteinID:
XP_034381608
Ensembl:
ENSCLMG00005000862
LinkDB
All DBs
Position
3:8443621..8450483
Genome browser
AA seq
427 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNHCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNTTSKASHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaggtgtacgacgatgcggtggaggaacgagtcatcaatgaggagtac
aagatctggaagaaaaacacacctttcctgtatgacctggtgatgactcatgcgctagag
tggccgagcctcactgtccagtggctcccagatgtcaacaggccagaggggaaggactac
gccgttcacaggctggttttggggacccatacatcagatgagcagaaccaccttgtgatc
gccagcgtccaggtaccgaatgacgacgcccagttcgatgcttcgcactacgacagcgag
aaaggagcagagtttggcggatttggttcagtaagcgggaagattgagattgagatcaag
atcaatcacgagggagaggtcaaccgagcccgctacatgccccagaaccactgcatcatt
gccaccaagactcccacctctgatgtgctggtcttcgactacaccaagcacccctcaaag
ccagatcccagtggggagtgtagtcctgacctcaggctgaaaggtcaccagaaagaaggg
tatggcctctcctggaatcccaacctcagcggcaacctgctcagcgcctccgacgaccac
accatctgtctatgggacatcggggccggcccaaaggaaggcaagattgtggacgccaag
accatcttcaccggccacacggcagtggtggaggacgtctcctggcatttgctccacgaa
tccctgttcggctcagtcgctgacgaccagaaactcatgatatgggacacccggtccaac
accacctccaaagccagccacgcggtagatgctcacactgccgaggtcaactgtctgagc
ttcaacccctacagcgagttcattcttgccactggttctgctgataagactgttgcgctg
tgggatctgaggaacctcaaactgaagctccactcctttgagtcccacaaagatgaaatc
ttccaggtacaatggtctcctcacaacgagacgatcctggcctccagcggcaccgaccgg
cgtctcaacgtctgggatctcagtaaaattggggaggagcagtccgcagaagatgctgag
gacggcccaccagagctgctgttcatccacggcggccacacagccaagatctccgacttc
tcctggaaccccaacgagccctgggtcatctgctcggtgtctgaggacaacatcatgcaa
gtctggcagatggcggagaatatctacaacgacgaggagccagacaacacccctgcatca
gaactggaggctcagggttcataa
DBGET
integrated database retrieval system