Cyclopterus lumpus (lumpfish): 117725957
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Entry
117725957 CDS
T09199
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117725957 (usp6nl)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117725957 (usp6nl)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
117725957
NCBI-ProteinID:
XP_034381764
Ensembl:
ENSCLMG00005013664
UniProt:
A0A8C3G2A1
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All DBs
Position
23:complement(15188480..15246443)
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AA seq
897 aa
AA seq
DB search
MQVLQIVKELVSPSRRRAAARFGASDQDAAVKLDQERAEIVAKYDKGKEATVEPWEDTNF
HLYKVVDRFGFVHKNELPSYDSVEEKHKHVELERTTKWLKMLKSWDKYKNSDKLVRRVYK
GIPLQLRGEVWCLLLDIPKIKEEKKDFYEKLKARARGVSPDVRQIDLDVNRTYRDHIMFM
TRYDVKQQALFHVLTAYSMYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGQKHA
MHGFFVPGFPKLMRFQEHHDRILRKTMPKLKHHLDGQEVLTSLYTMKWFFQCFLDRTPFT
LTLRIWDIYIFEGERVLPTMSYTILKLHKKHLMKLSMEELVEFLQVTLSKNFFFEDDFVV
DQLQASMTELRRIKLELPAPGKEEEFPKKVLGQLPPELAVVNHIANGQSHVEPAEPPRDP
SPVPERQRVSRPPSRSRRDSLEKSIRHHKADKREVRSRGSGEIPNEQRKQSTSTTNERGA
TTTSGPPPQLVTGDGVRHQGHAIAYQNSNAASSSRREITPRWFKPSDTKLEAVKAAAREV
KASRGTSPAPSSPEDSALSHHRPGSKGSSPDANRGSNASQYDNVPGLLEPEFEILEFDRA
PSRMRTPRSETAFSVPSLHPGSPSLAGSAASVASGPRGAKHPLPPAFTHNSPGGVHASYP
GSQSQYSTPPQQLSPGRTITEGPILHPAYSVGLDHRGEERLYGPSSRFTPPSGERAYATT
QHPSNRDSPEKALMNNSYTTYRRQPPPPSSNRNARPPPEHSQHLEAQGSSTPIYLQQLTS
TAQVYGFEGHQRGEAVPHYLPEGGPRRPADGLPWASEAAPPLLSPGGVPRSPSFQQAQMS
PVQEFTFPPNADAALHYRTQFQKQQPPVMKQQLPQLFGGPHYRHAQEAFAMQESMLL
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcctccagatcgtcaaggagctggtgtcgccgtccagacgcagggcagcggcc
aggtttggagcgtctgatcaggatgcggcggtgaaactcgaccaggagcgggccgagatc
gtcgccaaatatgacaaggggaaggaggccaccgtggagccctgggaggacaccaacttc
cacctctacaaagtcgtcgatcgcttcggcttcgttcataagaacgaacttccatcctac
gactcggtggaggagaagcataaacacgtggagctggagaggacgacaaaatggctgaag
atgctgaagagttgggacaaatacaagaacagcgacaagctggtccggagggtctacaag
ggaatccccctgcagctccggggggaggtgtggtgtctgctgctcgatatccccaaaata
aaggaggagaagaaagacttctacgagaaactgaaggccagagccagaggcgtctccccg
gacgtccgtcagatcgacctggacgtgaaccggacctacagggaccacatcatgttcatg
acccgctacgacgtcaagcagcaggctctcttccacgtcctcacagcctactccatgtac
aacacggaggtgggctactgccagggcatgagtcagatcacagctctgctgctcatctac
atgaacgaggaggacgccttctgggctctggtcaagctgctgtccgggcagaagcacgcc
atgcacgggtttttcgtccccggcttcccgaagctgatgcgcttccaggagcaccacgac
cgcatcctcaggaagacgatgcccaaactgaagcaccacctggacggccaggaggtgttg
accagcctctacaccatgaagtggttcttccagtgcttcctggacagaactcccttcact
ctcaccctcaggatctgggacatctacatctttgagggggagcgagtgctgcccaccatg
tcctacaccatcctcaaactgcacaagaagcacctgatgaagctgtccatggaggagctg
gtggagttcctgcaggtgactttgtcaaaaaatttcttcttcgaggatgactttgtggtc
gatcagctgcaggcgtccatgacggagctcaggaggatcaagctggagctgcccgcacca
ggtaaagaggaggagtttcccaagaaggttctggggcagcttccccctgagctggcggtg
gtgaaccacatagccaacggtcaaagccacgtcgagccggcggagcctcccagggacccg
agtcctgtaccggagcgccagcgggtgagtcgccccccaagccggtcgcgccgggactcg
ctagagaaatcgatccgccaccacaaggccgacaagagggaggtgcgctccaggggatcc
ggggagatccccaatgagcagagaaagcagtccacctccaccacaaatgagaggggggca
acaacgacctcgggccctccaccgcagctcgttacaggggacggagtgaggcatcagggc
cacgccatcgcctaccagaactccaacgcggcatccagctctcgcagggagatcaccccc
cggtggttcaaaccctccgatacaaagctggaggcggtcaaggcggcggcccgggaggtc
aaggcgagcagagggacgtcaccggccccttccagcccagaagacagcgcactgtcacac
caccggccgggctccaagggctccagccccgacgccaaccgcggctccaacgcctcccag
tatgacaacgtacccgggctgctcgagccggagttcgagatcctggagttcgacagagct
ccgtccagaatgaggacccctcgcagtgagacggccttcagtgtgccgtcccttcatccg
ggaagccccagtctggccgggagcgccgcctctgtcgcatcagggcccaggggggccaaa
caccctctccctcctgcgtttacccacaacagtccagggggggtccatgcaagctaccct
ggcagccagagccagtacagcacccctccccagcagctctccccgggcagaactatcacc
gaaggccccatcttacaccccgcatacagcgtgggcctggaccacagaggggaggaaaga
ctctatggtccgtcctctcggtttaccccaccctccggggagcgagcgtacgccaccacc
cagcacccgagcaacagagactccccggagaaggcgctcatgaacaattcctacaccacc
taccgcaggcagccgccgcccccgagctccaaccgaaacgccaggcctcccccggagcac
tcccagcatctggaagcccaggggagctccacaccgatctacctgcaacagctcacctcc
accgcacaggtctacgggtttgaggggcatcagcggggcgaggcggtcccgcactacctg
ccagaaggcgggccccgtcggcccgcggacgggctcccgtgggcgtcggaggctgctccg
ccgctcctatctccgggcggggtgccgcgttcgcccagcttccagcaagcccaaatgtct
cccgttcaggagttcactttccccccgaacgctgacgccgcgctccactacaggactcag
ttccagaagcaacagccgcccgtcatgaagcaacagctcccccagctgttcggaggacca
cactacaggcacgcacaggaggcgttcgccatgcaggagtccatgctgctgtga
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