Cyclopterus lumpus (lumpfish): 117725999
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Entry
117725999 CDS
T09199
Symbol
tbc1d22a
Name
(RefSeq) TBC1 domain family member 22A isoform X1
KO
K20360
TBC1 domain family member 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117725999 (tbc1d22a)
Membrane trafficking [BR:
clum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
117725999 (tbc1d22a)
Retrieval pathways
117725999 (tbc1d22a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
CDC45
Nop14
Motif
Other DBs
NCBI-GeneID:
117725999
NCBI-ProteinID:
XP_034381845
Ensembl:
ENSCLMG00005022605
LinkDB
All DBs
Position
23:5827498..5925951
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AA seq
573 aa
AA seq
DB search
MSNDGNKKQFWKRNAAKVPGSIQHVYGAQHPPFDPLLHANLIKAGNKPPPAMPGKPKKAT
TFQEFESITSDAWDVGDDDDELLAMAAQNLNIEVVMETANKVIENHSKQQERQRQDDTTE
LEQREEDTQEEVVAEDEEEDNEEDEEDREGEGDVTSPEVSFASQSSPYTDGRLVKSHSEA
PIGSPKDAAGEHAGLHRQRSLPHRPPVIPLVARMADQNTSGTPAMTEREASRLDKFKQLL
AGPNTDLEELRKLSWSGIPRQVRPITWKLLSGYIPANAERRESVLQRKRQEYFGFIQQYY
DSRNDENHQDTYRQIHIDIPRMSPESLVLQPKVTEIHIDIPRTNPLIPLFQQASVQEIFE
RILFIWAIRHPASGYVQGINDLVTPFFVVYVFEYIEEEVENFDVSSLQEETLRNIEADSF
WCMSKLLDGIQDNYTFAQPGIQRKVKALEELVSRIDESVHLHMQQYEVEYLQFAFRWMNN
LLMRELPLRCTIRLWDTYQAEPEGFSHFHLYVCAAFLVRWRKEILEERDFQGLMILLQNL
PTMHWGNEEVSVLLAEAYRLKFAFADAPNHYKR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgacggaaacaagaaacagttctggaaaagaaacgcagcgaaggttcctggc
agcattcagcatgtgtacggcgcacaacatccaccttttgacccgctgctccatgctaac
ctaattaaagcaggcaacaagcctcctccggccatgccaggcaagcccaagaaggctacc
accttccaggagttcgagagcattacaagtgatgcttgggacgttggggatgatgatgac
gagttgctggccatggccgcacaaaaccttaacattgaggttgtcatggagacagccaat
aaggtcatcgagaatcacagcaagcagcaggagagacagaggcaggacgacacgacagag
ctggaacagagagaagaggacacacaggaggaggtggtggcagaggacgaggaggaggac
aatgaagaagacgaggaggacagggagggggaaggagatgtgaccagcccagaggtctcg
tttgcctcccagagcagcccttacactgatggccgccttgtaaagtcccacagcgaagct
ccaattgggtcacctaaagatgcagcgggtgagcacgcaggcctccacagacaacggtct
ctgccccacaggccgcccgtcatcccgctagtggctcgcatggccgaccagaacacgtct
ggcaccccggccatgaccgagagggaagcatcccgtctggacaagttcaaacagttgttg
gcaggccccaacacagatctggaagagctacggaaactcagctggtctggaatcccacga
caggtccgaccaataacgtggaagctcctttcaggttacatcccagcgaacgcagaaagg
agagagagcgtcctgcagaggaagagacaagaatattttggcttcatccagcaatactat
gactcgcgcaacgacgagaaccatcaggacacatacagacagatccacatagacattccc
aggatgagtcctgaatctttggtgctgcagccaaaggtgacagagattcacattgacata
ccgagaactaatccccttattcctctctttcaacaagcttctgtccaagagatttttgag
aggatccttttcatctgggccatccgccatccggccagcggctacgtgcaaggcatcaac
gacctggtcacgccgttctttgtcgtctacgtctttgagtacatcgaggaggaagtggaa
aactttgacgtgtccagtctccaggaagagactctgaggaacattgaggccgacagcttc
tggtgcatgagcaaactgctggacggcatccaggacaactatacgtttgcccagccagga
atccagaggaaagtcaaggccctggaggagctcgtcagcaggattgatgagtccgtgcac
ctccacatgcagcagtacgaggtggagtacctgcagtttgccttccgctggatgaacaac
ctcctgatgagggagctgccactccgctgcacgatcagactgtgggacacctaccaggct
gaacctgagggcttctcccatttccacctctacgtgtgtgccgctttcctggtgaggtgg
aggaaagagattctagaggagagagatttccagggtctgatgatcctcctgcagaacctt
cccacgatgcactggggcaatgaggaagtgagcgtactgctggctgaagcctacaggttg
aagtttgcctttgctgacgcacccaaccactacaagagatga
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