Cyclopterus lumpus (lumpfish): 117726024
Help
Entry
117726024 CDS
T09199
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04150
mTOR signaling pathway
clum04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117726024 (lrp6)
04150 mTOR signaling pathway
117726024 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117726024 (lrp6)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117726024 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
117726024
NCBI-ProteinID:
XP_034381894
Ensembl:
ENSCLMG00005015932
UniProt:
A0A8C3A8W7
LinkDB
All DBs
Position
23:16701337..16754405
Genome browser
AA seq
1616 aa
AA seq
DB search
MGVALRSLLLCSLWFLVRGVPLLLYANRRDLRLVDAAHEKANATVVVGGLEDAAAVDYVY
SQGLIYWSDVSEEAIKRTVFNQSGASAVQTVVPGLASPDGLACDWLGSKLYWTDSETNRI
EVAELDGSLRKVLFWQELDQPRAIALDPERGYMYWTDWGEVPKIERAGMDGTNRSMIIDK
EIYWPNGLTLDYSLEKLYWADAKHNFIHRSNLDGSSREVVVKGELPHPFALTLYEDTLFW
TDWNTHSIHSCRKQTGAEQRIVHSDIFSPMDIHVFSAKRQDILVTCPCSVDNGGCSHLCL
LSPMKPFYQCACPTGVQLLEDGKTCRDGATQMLLLARRTDLRRISLDTPDFTDVVLQLDD
VRHAIAIDYDPVDGFVYWTDDDVKAVRRSRLDGSDSQFVVTSQVNHPDGIAVDWIARNLY
WTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADLDG
LERLVLVNTSLGWPNGLALDYEDRRLYWGDAKTDKIEVMDMDGTGRRVLVEDKLPHIFGF
TLLGDFIYWTDWQRRSIERVHKRTAEREFIIDQLPDLMGLKAAYVHKSFGTNPCAESNGG
CSHLCLYKPQGVQCGCPIGLELVADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAIPL
TGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKN
LYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAAM
DGTGRITLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGQDREVIADDLPHPFGL
TQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACAATNG
HCSHLCLAVPISGFVCGCPAHFSLNIDNKTCSAPTSFLLFSQKSAINRMVMDEQQSPDII
LPIHSLRNVRALDYDPLDKQLYWIDSKQNVIRRAQEDGNQSVTVVSGTLGGPSQGLQLYD
LSIDIYSRFIYWTSELTNAINVTRSDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNLLE
RSPKIERAALDGTEREVLFFSGLGKPVALAIDNELGKLFWVDSDLRRIESSDLSGANRIV
IADSNILQPVGLTVFGDHLYWIDKQQQMIERIDKTTREGRTKIQARIAYLSDIHAVHELD
MREYSKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPEQFSCTS
GEVDCIPQAWRCDGFAECDDSSDEEDCPVCSEAEFQCDSRQCVQLLLRCNGEADCQDRSD
ESKCEVRCPPDQFTCSNGQCIGKHKKCDHNTDCTDNSDEIGCYPTEEPPPPSNNTIGSIV
GVVMALFVVGAVYFVCQRVLCPQMKDDGETVANDFVVHGPSAVPLGYVPQPSSLSSSLPG
MSRGKSVIGSLSIVGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRSQY
TMEFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYTPGRRVPLKPGVAKGYA
SDLQYDSEPFPPPPTPRSQYLSAEENCESCPPSPFTERSYAHHLYPPPPSPCTDSS
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcgcgctgcggagcctgttgttgtgctcgctgtggttcctcgttcgaggcgtg
ccgctgctgctctatgccaaccggcgggaccttcggctcgtggacgcggcacacgaaaag
gccaacgccacggtggtggtgggggggctggaggacgccgccgcagtggactacgtttac
tcccagggcctcatctactggagcgacgtgagcgaggaggctatcaaacgcaccgtcttc
aaccagtcgggggccagcgccgtccagaccgtggtccccggtctggcctccccagacgga
ctggcctgtgactggttggggagtaaactttactggacggactcggaaaccaatcggatc
gaggtggccgagctggacgggtccttgaggaaggttttgttctggcaggagctggaccag
ccgagggccatcgctctggatccggaacgagggtacatgtactggaccgactggggcgag
gtcccaaagatcgagcgggcggggatggacgggacgaatcgctctatgatcatcgataaa
gagatctactggcccaacggtctgactctggattacagtctggagaagctgtactgggcg
gacgccaaacacaacttcatccaccgctccaacctggacgggtcctccagggaggtggtg
gtcaaaggggagctgccccacccgttcgccctcacgctgtacgaggacaccctgttctgg
accgactggaacacccactccatccactcctgcaggaagcaaaccggagccgagcagcgc
atcgtccactcggacatcttctcaccgatggacatccacgtcttcagcgccaagagacaa
gacatactggtgacatgtccctgctcggtggacaatggaggctgctcccacctgtgtctc
ctgtcccccatgaagcctttctatcagtgtgcctgtcccaccggagtccagctgctggaa
gacgggaagacctgcagagacggtgcgactcagatgctgctgctggcccggcggaccgac
ctgcgccgcatctctctggacacgccggacttcaccgacgtggtcctgcagctggacgat
gttcggcacgccatcgccatcgactacgacccggtggacgggttcgtctactggacggac
gacgacgtgaaggccgtgcgccgctcccggctggacggcagcgactcccagttcgtggtc
acgtctcaggtcaaccaccccgacggcatcgccgtggactggatcgcccggaacctgtac
tggaccgacacgggcacggaccgcatcgaggtgacccggctcaacggtaccatgaggaag
atcctgatctccgaagacctggacgagcccagagcaatcgtactggaccctgtggccggc
tacatgtactggaccgactggggggaggtgcctaagatcgagcgcgccgacctggacggg
ctggagcggctggttctggtcaacacgtctctgggttggcccaacggcctcgccctggac
tacgaggaccgcaggctgtactggggggacgccaagacggacaagatcgaggtgatggac
atggacgggacagggcgacgggtgctggtagaggacaaacttcctcacatcttcggcttc
actctgcttggagacttcatctactggacggactggcagcgccgcagcatcgagcgcgtc
cacaaacgcaccgcggagagggagttcatcatcgaccaactgcccgacctcatgggcctc
aaggccgcttatgtgcacaagtccttcggtacgaacccgtgtgccgagagcaacggcggc
tgcagccacctgtgcctctacaagccgcagggtgttcagtgcggctgccccatcggcctg
gagctcgtcgccgacatgaggacctgcatcgtccccgaagccttcctgctcttctcccgc
cacaccgacatccgccgcatctccctggagaccaacaacaacaacgtggccatcccgctc
accggcgtcaaggaggcctcggcgctcgacttcgacgtcaccgacaaccggatctactgg
accgacatcactctgaagaccatcagccgggccttcatgaacggcagcgccctggagcat
gtggtggagttcggtctggactacccggaggggatggcggtggactggctggggaagaac
ctgtactgggccgacaccggcaccaaccgcatcgaggtggccaaactggacgggcagcac
cggcaagtcctagtctggaaggatctggacagtccacgagctctggctctggatccggct
gaagggtacatgtactggaccgagtggggcgggaagcccaagatcgaccgcgcggcgatg
gacgggacgggtcggatcactctggtggccgacgtgggccgagccaacggactcaccatc
gactacgcggagcgccgcctctactggaccgacctggacaccacgctcatcgagtcctcc
aacatgctgggtcaggaccgcgaggtgatagcggacgacctgcctcaccccttcggcctc
acccagtaccaggactacatctactggaccgactggagccagcgcagcatcgagcgagcc
aacaagaccagcggccagaaccgcaccgtgatccaaggccacctggactacgtcatggac
atcctggtgttccactcgtcccggcagggcggctggaacgcctgcgccgccaccaacggg
cactgctcgcacctctgcctcgccgtgccaatcagcggcttcgtctgtggatgccccgcc
cacttctccctcaacatcgacaacaagacgtgcagcgccccgacctccttcctgctgttc
agccagaagtcggccatcaaccgcatggtgatggacgagcagcagagccccgacatcatc
ctgcccatccacagcctgaggaacgtgagggcgctggactacgacccgctggacaagcag
ctgtactggatcgactccaagcagaacgtgatccgccgcgctcaggaggacgggaaccag
agcgtgacggtggtgtccggcaccctgggggggcccagtcagggcctgcagctgtacgac
ctgagcatcgacatctacagccgcttcatctactggaccagcgagctcaccaacgccatc
aacgtcacgcgctcggacggcagccgggtcggggtggtgctgaggggggagcacgacaag
ccccgcgccatcgtggtcaacccggagagagggtacatgtacttcaccaacctgctggag
cgctcccctaagatcgagcgtgcggcgctggacgggacggagcgggaggttctgttcttc
agcggcttggggaagccggtcgctctggccatcgacaacgagctggggaagctgttctgg
gtggactcggacctgcggcgcatagagagcagcgacctgtccggagccaatcggatcgtg
atcgcagactccaacatcctgcagccggtgggcctgacggtgttcggggaccacctgtac
tggatcgacaagcagcagcagatgatcgaacgcatcgacaagaccaccagggagggccgc
accaagatccaggcccgcatcgcctacctgagcgacatccacgccgtccacgagctggac
atgagggagtacagtaaacacccgtgtacgtgggacaacggcggctgctcccacatctgc
atcgtgaagggcgacgggacgactcgctgctcgtgtcccgtccacctggtgctgctgcag
gacgagctgtcctgtggagagccccccacctgctccccggagcagttctcctgcacctcc
ggcgaggtggactgcatccctcaggcctggaggtgcgacggcttcgccgagtgcgacgac
agcagcgacgaggaggactgccccgtctgctcggaggccgagttccagtgcgacagccgt
cagtgtgttcagctcctgctgcgctgcaacggggaggcggactgccaggaccggtcggac
gagagcaagtgtgaagtgcgctgccctccagaccagttcacctgctctaatggtcagtgc
atcgggaagcacaagaagtgcgaccacaacacggactgcacggacaactctgacgagatc
ggctgctacccgacagaggagcctcctcccccgtccaacaacaccattgggtccattgtg
ggcgtggtcatggcgttgtttgtggtgggcgccgtgtacttcgtgtgccagcgcgtcctc
tgtcctcagatgaaggacgacggcgagacggtggccaacgacttcgtggtccacgggccg
tcggcggtgccgctgggctacgtgccgcagccgagctcgctgtccagctcgctgccgggc
atgtccaggggcaagtccgtgattggctccctcagcatcgtgggcgggagcagcgggccg
ccgtacgaccgcgcccacgtgacgggggcgtcgtccagcagctcgtccagcaccaaaggg
acctacttccccccgatcctgaatcctcctccgtctcctgctaccgttcgctctcagtac
accatggagttcggttattcctccaacagcccctcaactcatcgatcctacagctaccgg
ccctacagctaccgccacttcgccccccccaccacgccctgcagcacggacgtgtgtgac
agcgactacactccggggcgccgcgtgccgctgaagcccggcgttgccaagggttacgcc
agcgacctgcagtacgactctgagccgttccccccccccccgacgccccgcagccagtac
ctgtcggcggaggagaactgtgagagctgcccgccgtcgccgttcaccgagcgcagctac
gcccaccacctgtacccgccgccgccatcgccctgcaccgactcctcgtga
DBGET
integrated database retrieval system
