KEGG   Cyclopterus lumpus (lumpfish): 117726061
Entry
117726061         CDS       T09199                                 
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
  KO
K12327  caldesmon
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:clum00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    117726061 (cald1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:clum04812]
    117726061 (cald1a)
Cytoskeleton proteins [BR:clum04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     117726061 (cald1a)
SSDB
Motif
Pfam: Caldesmon
Other DBs
NCBI-GeneID: 117726061
NCBI-ProteinID: XP_034381984
LinkDB
Position
23:10827065..10877335
AA seq 594 aa
MEEMDFERRRELRRQKREEMRLEAERLARNDDDEEEAARERRRRARQDRMKGKESEEPSG
QPDSLVMTNSHSVTEAVSVSSSYGGGGAEDEDQALLDRMAKREERRLRRMKEALDRQKEL
DPATTDADDGIVVEKQEERPSSWRRGRSRDNEDDDEKTEAYSSRREEEEEEEEKKREEPR
EEEEAAPEGGEEADEGVDEEEELKVEVVEDKPRMSYLREQESPEEPKMQSEELADSVVRE
ISNRAKSTNSEAEEEAVASEEAEEVNERGWAREEERRQNGGLHEEEATPKQHRKPERTLS
RGSVRSPEVSAGDDQDDAARLEAELKLEELKRRRDDAESEEFERMRQKQQEAEVELDELK
KKREERKKVLEEEERQKKQEEAERKAREEEEKRKMKEEIERRRAEAAEKRQKVEDTMDEE
GRPFKCVSPRGSSLKIGERAEFLNKSAQKGAVKASHSPVVSKIDNRLEQYTSAAQQRENK
ESRSPRSGAVDLPMVTDSIRNIKSMWEKGNAFGTPGSGGSPFKEAAVMKTGVAGRINDWL
NKTPESGKTPGGRPTDLKPVDVSNKRSLWENKGASPTKVAGRGETKAVANGMGH
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggaggaaatggactttgagcggcgccgggagctgaggaggcagaagcgggaggagatg
cgcctggaggccgaacggctggcgaggaatgatgacgatgaggaggaggcagcccgcgag
aggaggcgcagggcgcgccaggacaggatgaagggcaaggagagtgaggagcccagcgga
caaccagacagtctggtcatgaccaacagccacagtgtgacagaggccgtgtctgtgagc
agctcctatgggggaggcggagctgaagacgaggaccaggccctgctggatcgcatggcc
aaacgcgaggagcgtcggctgcgacgcatgaaggaggctctggatcgacaaaaggagctg
gaccccgccaccacggatgccgatgatggcatcgtcgtggagaaacaggaggagaggcca
tcctcctggcgtaggggtcgttcccgcgacaacgaggacgacgacgagaagacagaggcg
tacagctcaaggagagaggaggaggaggaggaggaggagaagaagcgagaggagccgagg
gaggaagaagaggctgctcccgagggtggagaggaagcagatgagggtgttgatgaagag
gaggaactgaaagtggaggtggtggaggacaaaccgagaatgtcttacttgagagaacag
gaatcacccgaagaacctaaaatgcaaagcgaggaacttgctgattcagtagtcagggag
atttcaaaccgagccaagtcaaccaattcagaggctgaggaggaggcggtagcctcagag
gaggctgaggaggtgaatgagagaggctgggccagggaggaagagaggaggcagaacgga
gggctgcacgaggaggaggcgactcccaaacagcacaggaaacctgagaggaccctcagc
cgcggcagtgtgcgctcccccgaggtgtccgctggtgacgaccaggacgacgccgcccgc
ctggaggcagagctcaagctggaggagctgaagcgcagacgcgacgacgcggagagcgaa
gagtttgagaggatgaggcagaagcagcaagaggccgaagtcgagctggatgagctgaag
aagaagagggaggagaggaagaaggtgctggaggaggaggagaggcagaagaagcaggag
gaggcggagagaaaagccagggaggaggaggagaagaggaagatgaaggaggagattgaa
agaaggagagcagaggcagctgagaagagacagaaggtggaggacactatggacgaggag
ggcagacccttcaagtgtgtcagccctcgaggctcttctctgaagattggggagagggcg
gagttcctcaacaagtcggcacagaagggcgcagtgaaggcgtctcattctcccgtggtg
tccaagatagacaacaggctggagcagtacacttcagctgctcagcagagagagaacaag
gaatctcgatcccctcgttctggagcagtagaccttcccatggttaccgacagcattcga
aacatcaagagcatgtgggagaaaggcaacgcgttcggcacacctggaagtggcggcagc
ccgttcaaggaagcagctgtgatgaagacaggcgtggcgggtcgcattaacgactggctg
aataaaaccccggagagcggcaaaacgccaggaggaaggccaacggacctgaagcctgtt
gatgtctccaacaagaggagtctatgggaaaacaaaggtgcctctccaaccaaggtggca
ggcagaggggagaccaaagcagtcgccaacggtatgggacactaa

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