Cyclopterus lumpus (lumpfish): 117726061
Help
Entry
117726061 CDS
T09199
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117726061 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117726061 (cald1a)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117726061 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
117726061
NCBI-ProteinID:
XP_034381984
LinkDB
All DBs
Position
23:10827065..10877335
Genome browser
AA seq
594 aa
AA seq
DB search
MEEMDFERRRELRRQKREEMRLEAERLARNDDDEEEAARERRRRARQDRMKGKESEEPSG
QPDSLVMTNSHSVTEAVSVSSSYGGGGAEDEDQALLDRMAKREERRLRRMKEALDRQKEL
DPATTDADDGIVVEKQEERPSSWRRGRSRDNEDDDEKTEAYSSRREEEEEEEEKKREEPR
EEEEAAPEGGEEADEGVDEEEELKVEVVEDKPRMSYLREQESPEEPKMQSEELADSVVRE
ISNRAKSTNSEAEEEAVASEEAEEVNERGWAREEERRQNGGLHEEEATPKQHRKPERTLS
RGSVRSPEVSAGDDQDDAARLEAELKLEELKRRRDDAESEEFERMRQKQQEAEVELDELK
KKREERKKVLEEEERQKKQEEAERKAREEEEKRKMKEEIERRRAEAAEKRQKVEDTMDEE
GRPFKCVSPRGSSLKIGERAEFLNKSAQKGAVKASHSPVVSKIDNRLEQYTSAAQQRENK
ESRSPRSGAVDLPMVTDSIRNIKSMWEKGNAFGTPGSGGSPFKEAAVMKTGVAGRINDWL
NKTPESGKTPGGRPTDLKPVDVSNKRSLWENKGASPTKVAGRGETKAVANGMGH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatggactttgagcggcgccgggagctgaggaggcagaagcgggaggagatg
cgcctggaggccgaacggctggcgaggaatgatgacgatgaggaggaggcagcccgcgag
aggaggcgcagggcgcgccaggacaggatgaagggcaaggagagtgaggagcccagcgga
caaccagacagtctggtcatgaccaacagccacagtgtgacagaggccgtgtctgtgagc
agctcctatgggggaggcggagctgaagacgaggaccaggccctgctggatcgcatggcc
aaacgcgaggagcgtcggctgcgacgcatgaaggaggctctggatcgacaaaaggagctg
gaccccgccaccacggatgccgatgatggcatcgtcgtggagaaacaggaggagaggcca
tcctcctggcgtaggggtcgttcccgcgacaacgaggacgacgacgagaagacagaggcg
tacagctcaaggagagaggaggaggaggaggaggaggagaagaagcgagaggagccgagg
gaggaagaagaggctgctcccgagggtggagaggaagcagatgagggtgttgatgaagag
gaggaactgaaagtggaggtggtggaggacaaaccgagaatgtcttacttgagagaacag
gaatcacccgaagaacctaaaatgcaaagcgaggaacttgctgattcagtagtcagggag
atttcaaaccgagccaagtcaaccaattcagaggctgaggaggaggcggtagcctcagag
gaggctgaggaggtgaatgagagaggctgggccagggaggaagagaggaggcagaacgga
gggctgcacgaggaggaggcgactcccaaacagcacaggaaacctgagaggaccctcagc
cgcggcagtgtgcgctcccccgaggtgtccgctggtgacgaccaggacgacgccgcccgc
ctggaggcagagctcaagctggaggagctgaagcgcagacgcgacgacgcggagagcgaa
gagtttgagaggatgaggcagaagcagcaagaggccgaagtcgagctggatgagctgaag
aagaagagggaggagaggaagaaggtgctggaggaggaggagaggcagaagaagcaggag
gaggcggagagaaaagccagggaggaggaggagaagaggaagatgaaggaggagattgaa
agaaggagagcagaggcagctgagaagagacagaaggtggaggacactatggacgaggag
ggcagacccttcaagtgtgtcagccctcgaggctcttctctgaagattggggagagggcg
gagttcctcaacaagtcggcacagaagggcgcagtgaaggcgtctcattctcccgtggtg
tccaagatagacaacaggctggagcagtacacttcagctgctcagcagagagagaacaag
gaatctcgatcccctcgttctggagcagtagaccttcccatggttaccgacagcattcga
aacatcaagagcatgtgggagaaaggcaacgcgttcggcacacctggaagtggcggcagc
ccgttcaaggaagcagctgtgatgaagacaggcgtggcgggtcgcattaacgactggctg
aataaaaccccggagagcggcaaaacgccaggaggaaggccaacggacctgaagcctgtt
gatgtctccaacaagaggagtctatgggaaaacaaaggtgcctctccaaccaaggtggca
ggcagaggggagaccaaagcagtcgccaacggtatgggacactaa
DBGET
integrated database retrieval system