KEGG   Cyclopterus lumpus (lumpfish): 117726094
Entry
117726094         CDS       T09199                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04510  Focal adhesion
clum04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117726094 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117726094 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C
Other DBs
NCBI-GeneID: 117726094
NCBI-ProteinID: XP_034382052
Ensembl: ENSCLMG00005018902
LinkDB
Position
23:complement(14269485..14292553)
AA seq 1781 aa
MSLIILFITTLALRCPVGAQQLPDYADVCTEGSCYPATGDLLIGRAHKLSVSSTCGLEHP
ERFCIVGHLEEEKKCFVCDSRQMFDDDSNQVSHTIANLVTTFAHNRLKTWWQSENGVENV
TIQIDLEAEFHFTHLIMTFKTFRPAAMVIERSMDFGKTWQVYRYFAYDCESSFPGVSSGP
MGKVDEIICDSHYSDIEPSTEGEVIFRVLDPVFEIEDPYSLRIQNMLKITNLRVKFLRLH
TLGDNLLDSREEVTEKYYYSLYDMVVRGNCFCYGHASECAPIDGAATGVEGMVHGRCVCN
HNTEGLNCEHCQDFYHDLPWRPAEGRNSHACKRCECNQHSASCHFDSAVYATTGNVSGGV
CDDCRHNTVGRRCEQCAPFYHQHPNRDLRDPNVCEPCNCDPAGSLQGGLCDSHTNVPAGL
ISGQCRCKANVEGERCDHCRRGHHGLGQGPHGCLPCTCNQLGTLSGGNSCDSDTGRCFCK
RLVDGHNCNECLPQHWGLSNDMDGCRSCDCDQGGAVNNNCDPHSGQCVCREHMFGRRCDQ
VESGFYFITLDHYTYEAEDAKHGPGVTVVPRPYPLDRSPTWTGMGFVNVPEGAYLEFTVN
NVPESMDYDILIRYEPQLPEQWEQVNVRVQRPVFNPPSYSAHCDNPIQSGDDQSISLPPG
SRHVLLVRPVCFEQGLNYTLHLTLPLYSSVSDVQSPYTLIDSLVLIPRVRELDMFHGIDG
DGAWDTFQRYRCLESSQSVVKSPLTDICNDYIFSVSALLHKGAIACQCDPQGALSAVCEP
SGGQCRCRPSVVGRNCDHCAPATFLFSPAGCRPCGCDPLGSVSAFCHEATGQCECVPGAT
GRQCSHCLPGFWGFPQCRPCHCNGHSEYCHPQTGECQGCRDFTRGHHCDRCLGGYHGDPE
LGSGGHCRPCMCPDGPRSGRQFSDSCYLLATTNQLVCVCSPGYKGARCDECASGYFGNPA
VPGGRCMPCQCNGNIDMHDPGSCDAQTGACLKCLYHAEGYGCQHCKPGYYGDAATQSCRK
CMCYSVGTAPRACPSPDECECDQRSGQCPCRPNVVGQNCDACAADTWNIAGGAGCRRCDC
DPVHSSGSSCDEITGQCLCKPGFGGKTCRECRELFWGDPEVKCHACDCDSRGISSDQCHR
ATGQCTCVEGVSGPRCESCARGYQGEFPTCEPCHHCFAVWDTVVGELTNQTRRLELQVTQ
LQTSGVTAPYKDLVSSLETNVKAVRDIVESNPAAVKLEQIQELMHEITGVMSYLNGKLNT
TEETAILLRGDANATDANLNALTGEADQLELRVRELRQQVYNFKNANIQGAMDTIAAAHV
ESTTAERRANTSTSNPGNTVEESAAVRKATEDRLSGAQKEFDRKHQRNSQKLDKLSTELD
TFDLTPLSEQTCGGAAEGDGCSGSPCGGLGCVGEDEAPRCGGEGCGGLATTSRTALKSAK
DLDQEILAASQEVDKLSRMVWEANNRANQAKVNALEVLVKSNRSKERVEQSNQQLRHLIK
EIRDLLTNDKVEVSVIEAVANEVLALEMPTSTEKLQELTEEIREKVDTLTSVETILSQSA
EDIQAAETLLEQAKAASEEASTAKEAADMVKAALEETERAQSIAMDAILLAQNNTKGTLD
LLISVESETAVSELKLGNTTGRLVQLEREVGLLRQNSLEVNRLAESADWITDQARLNAEE
AQQEFDMEVKDRLVDVEDLVEDKGESVLQARRRADELQQEAKELLAQSSSKLQRLGELEG
SYEANQLILEAKAAELAELERSVRRVLDEISTKVTLYSTCL
NT seq 5346 nt   +upstreamnt  +downstreamnt
atgtcgctcataatcctctttatcacaactttagccctgcgatgccccgtcggggcgcag
cagctgccggactacgcggacgtgtgcacggagggcagctgctacccggccacaggtgac
ctgctgatcggccgcgcgcacaagctctccgtgtcctccacctgcggcctggagcacccg
gagcgcttctgcatcgtcgggcacctggaggaggagaagaaatgtttcgtgtgcgactcc
aggcagatgttcgacgacgacagcaaccaggtcagccacaccatcgccaacttggtcacc
accttcgcccacaaccgcctcaagacctggtggcagtcggagaacggtgtggagaatgtg
accatccagattgacctggaggccgagttccacttcacacacctgatcatgacatttaag
acgtttcggccggctgccatggtgatcgagcgctccatggacttcgggaaaacgtggcag
gtttatcgatacttcgcctacgactgcgagtcgtccttccccggcgtgtcctcggggccg
atgggcaaagtggacgagatcatctgcgactcccattactcggacatcgaaccgtccaca
gagggggaggtgatatttcgggtgctggaccccgtctttgagatcgaggacccctacagc
ctgaggatacagaacatgctgaagatcaccaacctccgggtgaagttcttgaggctccac
actttgggcgacaacctgctcgactcgcgcgaggaggtgacggagaagtactactactcc
ctctacgacatggtcgtccgcggcaactgcttctgctacggccacgcctccgagtgcgcc
ccgatcgacggagcggcgaccggagtcgagggcatggtccatggccgctgtgtgtgtaat
cacaacaccgagggactgaactgtgagcactgccaggacttctaccacgatttgccgtgg
agacccgccgagggccgaaacagccacgcctgcaagaggtgcgagtgtaaccagcactcc
gcatcgtgccacttcgactcggccgtgtacgcgaccaccggcaacgtgagcggcggcgtg
tgcgacgactgtcgacacaacacggtgggccggcggtgcgagcagtgcgcccccttctac
caccagcacccaaaccgcgacctgagggaccccaacgtctgcgagccgtgtaactgtgac
ccagccgggtctctgcagggcggactgtgtgactcgcacacaaacgtgccagccggactg
atctcaggccagtgtcgatgcaaagccaacgtggagggggagcgctgtgaccactgcagg
cggggacaccacggactgggacaggggcctcacggctgcctgccttgcacttgtaaccag
ctgggcactctgtcgggaggaaactcctgtgattcggacacaggaaggtgcttctgcaaa
cgcctcgtcgacggacataactgcaatgagtgcctgccgcagcactggggtctgtccaat
gacatggacggctgcagatcatgtgactgcgatcagggcggggctgtcaacaataactgt
gaccctcactcgggacagtgcgtgtgcagggagcacatgtttggaagacgctgcgatcaa
gtcgagtccggcttctacttcatcactctggaccactacacctacgaggcagaggacgcc
aagcatggacctggtgtgacggtggtaccgaggccttatcctctggatcgcagtcctacg
tggaccggtatgggcttcgtgaatgttccagaaggagcctacttagagttcaccgtgaac
aacgtcccagagtccatggactacgacatcctcattcgctatgagccccagctgccagag
cagtgggagcaggtgaacgtccgagtgcagcgtcccgtcttcaaccctccaagctactcc
gctcactgcgacaaccccatccagagcggagacgaccagtccatctctcttccacctgga
tccagacatgtgctgctggtgaggccggtgtgtttcgagcaaggactgaactacacgctg
cacctcactctgcctctctactcgtctgtcagcgacgtccagagcccgtacacgctcatc
gactctttggtgctgataccccgggtcagggagctggacatgttccatgggatcgacggt
gacggagcgtgggatacgttccagcgctaccggtgtctggagagcagccagagcgtcgtc
aaaagccccctgaccgacatctgtaacgactacatcttcagcgtctccgctctgctgcac
aaaggagccattgcatgccagtgtgaccctcagggtgcactcagcgctgtgtgcgagccc
agtggaggtcagtgccggtgtcgacccagcgttgtcggcaggaactgcgaccactgcgcc
cccgccacgtttctgttcagccccgccggctgcagaccttgcggttgcgaccctctgggc
tccgtcagcgccttctgccacgaggcgacaggccagtgcgagtgcgtccccggggccact
gggcgccagtgttcccactgcctgccgggcttctggggcttccctcagtgcaggccgtgc
cactgcaacggccacagcgagtactgccaccctcagaccggagagtgtcagggctgcaga
gacttcaccagaggacaccactgtgacaggtgtctgggcggttaccatggtgacccggag
ctgggttcaggtggacactgccgtccctgtatgtgccccgatgggccgcgcagtggacgg
cagttctctgacagctgttaccttctggctactacgaaccagctggtgtgtgtgtgcagc
cctggctacaaaggtgccaggtgtgacgagtgtgcctccggttatttcggaaaccccgcg
gtgcccggtgggcgctgcatgccctgccagtgtaacggcaacatcgacatgcacgacccg
gggtcctgtgacgctcagacgggcgcctgcctcaagtgcctgtaccacgcggagggctac
gggtgtcagcactgcaaaccgggttactacggcgacgctgccactcagagctgcaggaag
tgcatgtgttactcggtgggcacggcgcctcgggcctgcccgtcccccgatgagtgtgag
tgtgaccagcgcagcggtcagtgtccctgccggcccaacgtggtcggccagaactgcgac
gcctgcgccgccgacacgtggaacatcgccggcggggcgggctgccggcgctgcgactgc
gaccccgtccactcctccggatcctcctgcgacgagatcacaggacagtgtttgtgcaaa
cccggttttggtggcaagacgtgtcgggaatgcagagagctcttctggggggatccagag
gtcaaatgtcacgcttgtgactgcgactctcggggaatctccagcgatcagtgccatcgc
gccacaggtcagtgcacctgtgtggagggcgtgtccgggccgcgctgtgagagctgcgcc
aggggctaccagggggagttccccacctgtgaaccctgccaccactgcttcgcggtctgg
gacaccgtcgtcggcgagctgaccaatcaaacccgacgcctggagctccaagtgacgcag
ctccagaccagcggggtgacggcgccatataaagacttggtcagcagcctggagacgaac
gtcaaagctgtccgagacatagtagagagcaacccggcagcggtgaagctggagcagatt
caggagctgatgcatgagatcaccggtgtgatgtcatacctcaacggaaagctgaacacg
acggaggagaccgcgatccttctccgcggtgacgccaacgccaccgacgcaaacttgaac
gcgctgactggtgaggccgaccagctggagctgagagtccgggagctgagacagcaggtg
tacaatttcaagaacgccaacatccagggtgccatggacaccattgcagctgcacacgtg
gagtctactacggctgagcgccgcgccaacacctccaccagtaatcccggaaacaccgtg
gaggaatcggccgcagtacggaaagccacagaggacagactgagcggcgcccagaaggag
tttgaccgcaagcaccaaaggaactctcagaagctggacaaactgtccacggagctggac
acatttgacctgacgccacttagcgagcagacatgtggtggtgcagctgagggcgacggc
tgctccggttccccctgcggtggtttgggttgcgtcggcgaggacgaagctcctcggtgc
ggcggagaaggatgcggaggcctcgccacgacttcccgaaccgcactcaaatccgccaaa
gacctggaccaggagatcctcgccgccagtcaggaagtggacaagctctccaggatggtg
tgggaagccaacaaccgcgctaaccaggccaaggtgaacgctctggaggtgctggtcaag
tccaaccggagcaaagagagagtggagcagagcaaccagcagctccgtcacctcatcaag
gagatacgagacctgctcaccaacgacaaggtggaggtttcggtgatcgaggcggtggcc
aacgaggtgctggctctggagatgccgacctccaccgagaagctgcaggagctgacggag
gagatccgggagaaggtcgacactctgaccagcgtggagacgatcctcagtcagagcgcc
gaggacatccaggccgcggagacgctgctggaacaggccaaggccgccagtgaggaggcg
tcgaccgcgaaggaggcggcggatatggtgaaggccgccctggaggagaccgagcgtgct
cagagcatcgccatggacgccatcctactggcccagaacaacacgaagggcaccctggac
ctgctgatctctgtggagtcggagacggccgtgtcggagctgaagctcggcaacaccacg
gggcgcctggtccagctggagagggaggtcggcctgctgagacaaaacagcctggaggtc
aaccgcctggcggagtcggccgactggatcaccgaccaggcccgactgaacgcggaggag
gcccagcaggagtttgacatggaggtgaaagacagactggtggatgtcgaggacctggtg
gaggacaaaggggagtcggtgctgcaggcgaggaggagagcggacgaactgcagcaggaa
gccaaagagctgctcgctcagagcagcagcaagctgcagagactcggagagttggaaggt
tcctacgaggccaaccagctcatcctggaggccaaagctgcagagctggcggagttggag
cgaagcgtccgccgggtcctggatgagatcagcaccaaagtgacgctgtacagcacctgt
ctgtga

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