Cyclopterus lumpus (lumpfish): 117726098
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Entry
117726098 CDS
T09199
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117726098 (caprin2)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117726098 (caprin2)
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
117726098
NCBI-ProteinID:
XP_034382062
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Position
23:complement(88038..105643)
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AA seq
903 aa
AA seq
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MRALCDLNITVGKGSSSVQTFGCPAHCQRGFNKHDSDTSVVISMVQLCPSQSLSVTPPPE
CTEEGQERQEHLLVADHPTVCSPSGLLALQLSLETSTVYYGYDSYIEDGLICLKHKVRNL
EKKKLRLKDYKKRLNWGEELNKDQMEAVEKYEEVLHHLAFARELHKSLDVLTQDLLRAQK
KAMRKEQVVKEETERRQLSTVLQIQHLLLCMQQEHVKRDLLAGHNQAPHIAAQKLHCLNQ
LAALLGFKRDNGLSLEEQMEQAALAYLDLLEGKDEPVAGATFKFFKEEFTRLLNCKYFSC
LPRPPNKSQEVLLRSNSHSTASKPKEVPKEFFNGLYQSETETAPTENWKADFQTREREPP
DYWDMEFSDGPGSLQAAVHKPWRGADTFMPKVTVNTKKQHIDYNKRKETGAKSKQLAKSA
VHLGMPVEVFSSPYALPKDPVLRKQHLEDFMTKIHGSFSFMQDSLLDGDIALTNDHQGLK
RLPSGSPLPLDHTDLRSPVAILPKSMHSTPLPTRLLERKTSLTNEDRCLEICDLTLSSNL
PHIPLTESRKQAPCNGVASCTATSPQGQTFSTPPNRRTLTSAHFQNIQPVFKVTASLPQN
GELNYKPDSDVFDKPRYSIASTQTPPEFAPSEDEPQLMYQSDYTVGNGGPIFLSPGQSGG
CRPSESYYTRASVRGGSYTPQTALRDSGPLLYAARDSGYQHGYRRGGGRHNSSAAWSDSS
QVSTPDREAALTIVDSGHGDSLSVSTVEVPLTPHGHHHTLLPMQLYPLSQPLRVAFNASR
TANFAPGNLDQPIVFDQLHSNLGEMYDPHIGRFTCPVNGTYVFIFHILKLAINVPLYINL
MRNEEVMVSAYANDGAPDHETASNHAILPLFQGDQVWIRLHRGAIYGSTWKYSTFSGFLL
YQD
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccctctgcgatttaaacatcacggttggaaaaggctcgagcagcgtccagacg
ttcggatgcccagcgcattgccagagaggcttcaacaaacacgactcagacacgagtgtg
gtgatcagcatggtgcagctttgtccttcccagagtctaagtgtcacccctccacctgag
tgcacagaagaggggcaggaaagacaggagcacctgctggtggctgatcacccgactgtg
tgctcacccagtggtctccttgccctgcagctcagcctagagacctccactgtctactat
ggctatgactcctatatagaagatgggctcatctgcctcaaacacaaagtccgtaatttg
gagaaaaagaagctgagacttaaagactacaagaagaggctgaactggggtgaggaactt
aacaaggatcagatggaggctgtagaaaagtacgaggaggtgctgcatcatctggcattt
gcacgggagctccacaaaagcctggatgtcttgactcaggatttgctgagagcccagaag
aaggcaatgagaaaggagcaagtggtgaaggaggagaccgagaggcggcaactgagtact
gtgctgcagatccagcacctcctcctctgcatgcagcaggagcacgttaaaagagacctg
ctggctggacacaaccaggcgccacacattgcagcccaaaagctgcattgcctgaatcag
cttgctgccctactggggttcaagagggataacggactgagtttagaggagcagatggag
caagcggctctggcctatttggacctgcttgaggggaaagacgagccagtggctggagcc
acatttaagtttttcaaagaagagttcaccaggctgttgaactgcaagtacttcagttgt
ctcccacgtccacccaacaagtctcaagaggtgttactgaggtcaaacagccacagcacc
gcgtcaaaaccaaaggaagttcctaaggagttttttaatggactgtaccagagtgaaacg
gagactgctcctactgagaactggaaggcggacttccaaacaagggagcgggagcctccg
gactactgggacatggagttttcagatggacctggctcactccaagctgcagtccacaaa
ccatggagaggagctgacacttttatgcccaaggtcacagtcaacaccaagaaacaacat
attgactacaataagagaaaagaaactggggccaaaagcaagcaacttgccaaatcggct
gttcacttgggtatgcctgtggaagttttcagctctccatatgccttacccaaagaccct
gtactgaggaagcagcacctcgaggacttcatgacaaagatccatggctccttcagtttt
atgcaggattctcttctggatggtgatattgcccttactaacgaccatcaaggactgaag
agactgccgtctgggtctccattgcctctggatcacacggacttgagaagcccagttgct
atcctgcccaaatcaatgcattccaccccactgcctaccaggcttctggagcgcaaaacc
agtctgacaaatgaggatcggtgcctggagatctgtgacctgacgctttcctcaaaccta
cctcatatcccattaactgagtcaaggaagcaggcaccctgtaatggggtggcatcttgc
accgccacctcccctcagggacaaactttctctacaccccccaacaggcgaactctgaca
tctgcccattttcagaacatccagccagtcttcaaggtgactgcctccttacctcagaat
ggggaattgaactacaaaccagactctgacgtttttgataagcccaggtatagcattgcc
agtacccaaacgccacctgagtttgctccctcagaagacgaaccacagctgatgtatcag
tctgactatacggtgggtaacggtggaccgatcttcctgtcccctggccagtcaggtgga
tgtcgtcccagcgagtcgtactacaccagagcatctgtgagaggaggatcctacaccccc
cagacggctctcagggactctggccctctcctctatgctgctagagactctggatatcaa
cacggctacagacgcggaggaggaaggcataactcgagtgcagcctggagtgactcttca
caggtgagcacaccagaccgagaggcagctttaacaattgtggactcgggtcatggggat
tccctgtcggtctccactgtggaggtccctctgactccccatggccaccatcacaccctg
cttcccatgcaactctacccgctctcccagccgcttagagtggccttcaacgcctctcgt
actgccaacttcgcccccggaaacctggaccagcccatcgtgtttgaccagctgcacagc
aacctaggggagatgtacgacccccacattggccgcttcacctgtcctgtcaatggaacc
tatgtcttcatcttccacatcctgaagcttgccatcaacgtgccactctacattaacctc
atgcgcaacgaagaagtcatggtctctgcatatgccaacgatggagccccagatcatgag
acggccagcaaccatgccatcctgcctctcttccaaggagaccaggtgtggatccggttg
catcgtggtgccatctatggcagcacctggaagtacagtactttctctggctttctgctg
taccaggattga
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