KEGG   Cyclopterus lumpus (lumpfish): 117726098
Entry
117726098         CDS       T09199                                 
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
  KO
K18744  caprin-2
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117726098 (caprin2)
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     117726098 (caprin2)
SSDB
Motif
Pfam: C1q Caprin-1_dimer Caprin-1_C
Other DBs
NCBI-GeneID: 117726098
NCBI-ProteinID: XP_034382062
LinkDB
Position
23:complement(88038..105643)
AA seq 903 aa
MRALCDLNITVGKGSSSVQTFGCPAHCQRGFNKHDSDTSVVISMVQLCPSQSLSVTPPPE
CTEEGQERQEHLLVADHPTVCSPSGLLALQLSLETSTVYYGYDSYIEDGLICLKHKVRNL
EKKKLRLKDYKKRLNWGEELNKDQMEAVEKYEEVLHHLAFARELHKSLDVLTQDLLRAQK
KAMRKEQVVKEETERRQLSTVLQIQHLLLCMQQEHVKRDLLAGHNQAPHIAAQKLHCLNQ
LAALLGFKRDNGLSLEEQMEQAALAYLDLLEGKDEPVAGATFKFFKEEFTRLLNCKYFSC
LPRPPNKSQEVLLRSNSHSTASKPKEVPKEFFNGLYQSETETAPTENWKADFQTREREPP
DYWDMEFSDGPGSLQAAVHKPWRGADTFMPKVTVNTKKQHIDYNKRKETGAKSKQLAKSA
VHLGMPVEVFSSPYALPKDPVLRKQHLEDFMTKIHGSFSFMQDSLLDGDIALTNDHQGLK
RLPSGSPLPLDHTDLRSPVAILPKSMHSTPLPTRLLERKTSLTNEDRCLEICDLTLSSNL
PHIPLTESRKQAPCNGVASCTATSPQGQTFSTPPNRRTLTSAHFQNIQPVFKVTASLPQN
GELNYKPDSDVFDKPRYSIASTQTPPEFAPSEDEPQLMYQSDYTVGNGGPIFLSPGQSGG
CRPSESYYTRASVRGGSYTPQTALRDSGPLLYAARDSGYQHGYRRGGGRHNSSAAWSDSS
QVSTPDREAALTIVDSGHGDSLSVSTVEVPLTPHGHHHTLLPMQLYPLSQPLRVAFNASR
TANFAPGNLDQPIVFDQLHSNLGEMYDPHIGRFTCPVNGTYVFIFHILKLAINVPLYINL
MRNEEVMVSAYANDGAPDHETASNHAILPLFQGDQVWIRLHRGAIYGSTWKYSTFSGFLL
YQD
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgcgggccctctgcgatttaaacatcacggttggaaaaggctcgagcagcgtccagacg
ttcggatgcccagcgcattgccagagaggcttcaacaaacacgactcagacacgagtgtg
gtgatcagcatggtgcagctttgtccttcccagagtctaagtgtcacccctccacctgag
tgcacagaagaggggcaggaaagacaggagcacctgctggtggctgatcacccgactgtg
tgctcacccagtggtctccttgccctgcagctcagcctagagacctccactgtctactat
ggctatgactcctatatagaagatgggctcatctgcctcaaacacaaagtccgtaatttg
gagaaaaagaagctgagacttaaagactacaagaagaggctgaactggggtgaggaactt
aacaaggatcagatggaggctgtagaaaagtacgaggaggtgctgcatcatctggcattt
gcacgggagctccacaaaagcctggatgtcttgactcaggatttgctgagagcccagaag
aaggcaatgagaaaggagcaagtggtgaaggaggagaccgagaggcggcaactgagtact
gtgctgcagatccagcacctcctcctctgcatgcagcaggagcacgttaaaagagacctg
ctggctggacacaaccaggcgccacacattgcagcccaaaagctgcattgcctgaatcag
cttgctgccctactggggttcaagagggataacggactgagtttagaggagcagatggag
caagcggctctggcctatttggacctgcttgaggggaaagacgagccagtggctggagcc
acatttaagtttttcaaagaagagttcaccaggctgttgaactgcaagtacttcagttgt
ctcccacgtccacccaacaagtctcaagaggtgttactgaggtcaaacagccacagcacc
gcgtcaaaaccaaaggaagttcctaaggagttttttaatggactgtaccagagtgaaacg
gagactgctcctactgagaactggaaggcggacttccaaacaagggagcgggagcctccg
gactactgggacatggagttttcagatggacctggctcactccaagctgcagtccacaaa
ccatggagaggagctgacacttttatgcccaaggtcacagtcaacaccaagaaacaacat
attgactacaataagagaaaagaaactggggccaaaagcaagcaacttgccaaatcggct
gttcacttgggtatgcctgtggaagttttcagctctccatatgccttacccaaagaccct
gtactgaggaagcagcacctcgaggacttcatgacaaagatccatggctccttcagtttt
atgcaggattctcttctggatggtgatattgcccttactaacgaccatcaaggactgaag
agactgccgtctgggtctccattgcctctggatcacacggacttgagaagcccagttgct
atcctgcccaaatcaatgcattccaccccactgcctaccaggcttctggagcgcaaaacc
agtctgacaaatgaggatcggtgcctggagatctgtgacctgacgctttcctcaaaccta
cctcatatcccattaactgagtcaaggaagcaggcaccctgtaatggggtggcatcttgc
accgccacctcccctcagggacaaactttctctacaccccccaacaggcgaactctgaca
tctgcccattttcagaacatccagccagtcttcaaggtgactgcctccttacctcagaat
ggggaattgaactacaaaccagactctgacgtttttgataagcccaggtatagcattgcc
agtacccaaacgccacctgagtttgctccctcagaagacgaaccacagctgatgtatcag
tctgactatacggtgggtaacggtggaccgatcttcctgtcccctggccagtcaggtgga
tgtcgtcccagcgagtcgtactacaccagagcatctgtgagaggaggatcctacaccccc
cagacggctctcagggactctggccctctcctctatgctgctagagactctggatatcaa
cacggctacagacgcggaggaggaaggcataactcgagtgcagcctggagtgactcttca
caggtgagcacaccagaccgagaggcagctttaacaattgtggactcgggtcatggggat
tccctgtcggtctccactgtggaggtccctctgactccccatggccaccatcacaccctg
cttcccatgcaactctacccgctctcccagccgcttagagtggccttcaacgcctctcgt
actgccaacttcgcccccggaaacctggaccagcccatcgtgtttgaccagctgcacagc
aacctaggggagatgtacgacccccacattggccgcttcacctgtcctgtcaatggaacc
tatgtcttcatcttccacatcctgaagcttgccatcaacgtgccactctacattaacctc
atgcgcaacgaagaagtcatggtctctgcatatgccaacgatggagccccagatcatgag
acggccagcaaccatgccatcctgcctctcttccaaggagaccaggtgtggatccggttg
catcgtggtgccatctatggcagcacctggaagtacagtactttctctggctttctgctg
taccaggattga

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