Cyclopterus lumpus (lumpfish): 117726179
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Entry
117726179 CDS
T09199
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117726179 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117726179 (myo5aa)
04131 Membrane trafficking [BR:
clum04131
]
117726179 (myo5aa)
03029 Mitochondrial biogenesis [BR:
clum03029
]
117726179 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117726179 (myo5aa)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117726179 (myo5aa)
mRNA cycle factors
P-body specific factors
117726179 (myo5aa)
Membrane trafficking [BR:
clum04131
]
Others
Actin-binding proteins
Myosins
117726179 (myo5aa)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117726179 (myo5aa)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117726179 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
AAA_24
nSTAND3
Myosin_N
DUF5382
AAA_16
DUF4238
Motif
Other DBs
NCBI-GeneID:
117726179
NCBI-ProteinID:
XP_034382197
Ensembl:
ENSCLMG00005018808
LinkDB
All DBs
Position
3:complement(20445115..20491000)
Genome browser
AA seq
1873 aa
AA seq
DB search
MAASELYTKCARVWIPDAEEVWKSAELTKDYKNGDTSLQLMLEDGTNIEHKLDPKTKNLP
YLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEPLPIYG
SDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSTSEANVEQKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDTRYRIIGANMR
TYLLEKSRVVFQADEERNYHIFYQLCASSHLPEYKMLTLSSANDFLYTRQGRSPVIVGVD
DTMELSTTRKAFTLLGINESNQMGLFQVLAAILHLGNVEIKDRDSDSSVIPPNNRHLTAF
CELVGVSYQDMSQWLCHRKLKTATETYIKTLPRLQATNARDALSKHIYAKLFNWIVAHVN
KALITNITQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMRE
QIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKTCSLFEK
PRMSNRAFIIQHFADKVEYQCDGFLEKNKDTVNEEQINVLKASKFHLLVELFHDGEKAIS
PTGQVAGTGGRTRLSIKPDKSREKSSKENKKTVGCQFRNSLHMLMGTLNATTPHYVRCIK
PNDFKLGFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLPD
KKLTCRNVMEQLVQDQDKYQFGKTKIFFRAGQVAYLEKLRSEKLRVACVRIQKTIRCWLA
RKKYLRKRSAAITIQRFTRGYQARCLAKFMRRSQAATVIQKYQRMCVERKHYRQKQAAAL
VMQTILRAYMARQKYQALLREHKVVIIQKRVRGWLARCWYKRCLVSIVYLQCCFRRMKAR
RQLKKLKIEARSVEHFKKLNKGMENKIMQLQRKLDEQNKEKRLVNEKLVALENTYTTESE
RMRGELGRLRGVEEDAKNKGNQVTSLLEELEKLRKELSSTQKEKKTIEDWAQTYRSEMEK
MVSELKEQNGSLKKEKDDLNRLIQEQSQQMTEKMVRAIAEETQQLETNLNEERSRYQNLL
TEHRRLEEKHDDLKEEMVSSNVSKPGHRRTDSTHSSNGSEYTYNSECAELEEGSRAAEDV
TRGIDTSLTLKLQKRLTELEQEKQSLRNELENKEDQFLRARARDDVEFKKARGAELEYES
LKRQELESENKKLKHDLVDIRQSLLGNAATGAGAPGSPAYKVVLEQLNSSCEELEVRKEE
VLILRSQLVSQKEAMHHKDEKETMTELSVFVEDVSKLKDAGELKQAYMGLKDTNRSAAPD
FHKLNEDGELWLVNQGLKETIRLLEHQLQTQRRGYDSEVESLRGELQNVKEDNNRQQQLL
AQNLQLPPEARIEASLQHEITRLTNENLELLAEDPTASREARVIILRRMVDLMEQLEKQD
RTIRKLKKQLKVYSKRIGEMGAGQTEGQTSPGQMVDEPIHPVNIPRREKDFQGMLEYKKE
DELKLVKNLILELKPRGVAVNLIPGLPAYILFMCLRHADYVNDDQKVRTLLTSTINSIKK
ILKKRGDDFETVSFWLANTCRFLHCLKQYSGDEAFMKHNTQRQNEHTLSNFDLAEYRQVI
SDLAIQIYQQLIKCMENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTASIADEGTYTLD
SILRQLSAFHSTMCQHGTDPELIKQVVKQQFYIIGAVTLNNLLLRKDMCSWSKGMQIRYN
VSQQEEWLRDKGLMVCGAKETLEPLIQAAQLLQVKKKTDEDADAICSMCLALTTAQIVKV
LNLYTPVNEFEERVSVSFIRTIQTRLRDRCESPQLLMDTKMIYPVTFPFSPSSLALETIQ
IPSSLNLGFLTRV
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcggagctgtacacgaagtgtgctcgggtgtggatccccgacgcagaggag
gtgtggaagtccgccgagctgaccaaggactacaaaaatggcgacacctccctgcagctc
atgctggaggatggaacgaacattgagcacaaactggaccccaaaacaaagaacctgcct
tacctgcgaaaccccgacatcctggtgggcgagaatgacctcacagcactcagctacctc
cacgagccggccgtgctgcacaacctcaaagtccgcttcatcgactccaagctcatctac
acttactgtggaatcgttctggtggccatcaacccgtatgagccgctgcccatctacggc
tcagacatcatcaatgcgtacagcggtcagaacatgggagacatggacccacacatcttc
gctgtggcagaggaggcttacaaacagatggccagggacgagaggaaccagtcgatcatt
gtgagtggggagtccggagcaggaaagacggtatcagccaaatacgccatgagatacttt
gctaccgtcagcggctccaccagcgaggccaacgtagagcagaaagtcttggcttccaac
cccatcatggaggccattggaaatgcaaagaccacccgaaatgacaacagcagtcgcttc
gggaaatacatcgagatcggcttcgacacgcgctaccgtatcatcggcgccaacatgagg
acatatctgctggagaagtcgcgggtggtctttcaggccgacgaggaaaggaattaccac
atcttctatcagctttgtgcatcatcccatctgcctgagtacaaaatgctgacgctgagc
agcgcaaacgacttcttgtacaccaggcagggccgcagcccggttatcgtcggtgtggat
gacaccatggagctgtccaccactcgcaaagccttcacattgctcggtattaatgagtcc
aaccagatggggttgttccaggttttggctgctattcttcatctgggaaacgtggagata
aaggacagagactcagacagcagcgtcattccccccaacaatcgccacctgacggcgttc
tgcgagctggtgggcgtgagctaccaggacatgtctcagtggctgtgccacaggaagctg
aagacggccacagagacgtacatcaagaccctgccccgcctgcaggccaccaacgcccgc
gatgcgctgtcgaaacatatctacgccaagctcttcaactggattgtggcgcacgtgaac
aaagccctcatcaccaatatcacacagcactccttcatcggggtcctcgacatctacggg
tttgagacatttgagatcaacagctttgagcagttctgtatcaactacgccaatgagaaa
ctccagcaacagttcaacatgcatgtgttcaagctggagcaggaggagtacatgagggag
cagatcccctggactctgattgacttctacgacaatcagccctgcatcaacctcatagag
gccaagatgggcatcctggacctgttggacgaggagtgcaagatgcctaaaggttcggat
gattcttgggctcagaaactctacaacacccacctaaagacctgctccctcttcgagaag
cctcgcatgtccaaccgcgctttcattattcaacattttgctgacaaggtggagtaccaa
tgtgacggtttcctggagaagaacaaggacacagtgaacgaagaacagatcaatgtgctg
aaggccagcaagtttcacctgctggtggagctgtttcacgacggggagaaagccatcagt
cccactggtcaggtcgctggcaccggaggccggacccgcctcagcatcaagcctgacaag
agccgggaaaagagcagcaaggagaacaagaagaccgttggctgccagtttcgtaactcg
ctgcatatgctgatgggtactttgaacgcaacaactccgcactacgtgcggtgcatcaaa
cccaatgacttcaagctgggcttcacgttcgatcctaaacgtgcggtgcagcagctcaga
gcctgcggtgtcctggaaaccatccgcatctctgctgcaggtttcccatccagatggacg
taccaggagttcttcagccgttacagagtgctgatgaagcagaaggacgtgttacctgac
aagaagttgacatgcagaaatgttatggagcaactggtgcaggaccaggacaaataccag
tttggtaagaccaagatcttcttcagggccggccaggttgcctacctggagaagctgagg
tcggagaagttgcgtgttgcctgcgttcgcatccagaagaccattcgctgctggctggcg
cgcaagaagtatctgcgcaagcgcagcgctgccatcaccatccagaggttcaccagagga
taccaagctcgctgcctggccaagttcatgcgtcgctcgcaggcggccaccgttatccag
aagtaccagcggatgtgcgtggagaggaaacactacagacagaagcaggctgccgctctg
gtcatgcagacgatcctccgagcttacatggcccggcagaagtaccaggcgttactgcgg
gagcacaaggttgtgatcattcagaagcgcgtccgtggctggttggctcgatgctggtac
aagcgctgcctcgtctccatcgtctacctgcagtgctgcttccgcaggatgaaggccagg
cgccagttgaagaagctgaagatcgaggcccgctcagtggagcacttcaagaagctcaac
aaaggcatggagaacaagatcatgcagctgcagaggaaactcgacgagcagaacaaggaa
aagcggttggtcaacgagaagctcgtcgctctggagaatacctacacaacagagagcgag
cggatgcgcggcgagctgggccggctgcgcggggtggaggaggatgccaagaacaaaggc
aaccaagtgacctcgctgctggaggagctggagaagctgaggaaggagctgagttccaca
cagaaggagaaaaagaccatcgaggactgggcgcaaacctacaggagcgaaatggagaaa
atggtctcagagctgaaggaacagaatggctcgctgaagaaagagaaggacgacttgaac
aggttgattcaggaacagagtcagcagatgacagagaaaatggtccgtgcgatagccgag
gagactcagcagctggagacgaatctgaacgaggagcgatctcgctaccagaacctcctg
acggaacaccgtcgcctcgaggagaaacacgacgacctgaaggaggagatggtttcttcg
aacgtctccaagcccggccacaggagaacagattccacccacagcagcaacggatccgag
tacacatacaactccgagtgcgccgaattggaagaaggttcccgtgctgccgaagatgtg
acacgagggatagacacctcgctgaccctcaagctgcagaaacgtttaacagaactggag
caagaaaagcagtcgctgcgcaacgaactggaaaacaaagaggatcagttcctgcgggct
agagccagggatgacgttgagtttaaaaaggctcgaggggcagagctggagtacgagtcc
ctcaagcgtcaggagctggagtcggagaacaagaaactgaaacatgacctggtggacata
aggcaaagcctgctgggtaacgcagctacaggtgctggggccccgggctccccagcttac
aaggtggtcttggagcagctcaactcgtcctgtgaggaactggaggtccgtaaggaggag
gtgctgatcctgcgctcccagctggtcagccagaaggaagccatgcaccacaaggatgag
aaggaaaccatgacggagctttcggtctttgttgaggatgtgtccaaactgaaggacgct
ggtgaactcaagcaggcttacatgggcctcaaagacaccaacagatctgccgctccagac
ttccataagctgaatgaggacggagagctgtggctggttaatcagggcttaaaggaaacc
atcaggctactggagcaccagctgcagactcagcggagaggttacgatagcgaggtggag
tcgttgcgcggcgagctgcagaatgtcaaggaggataacaaccgtcagcagcagctcttg
gcccaaaacctgcagctgcctccggaggcccgaatcgaagccagtctgcagcacgagatc
acccggctcaccaacgagaacctggaactcctggctgaagaccccacagcgtcccgagag
gctcgagtcatcattttacgacggatggttgatctaatggagcagctggagaagcaggac
cgaaccatccgcaagctcaagaagcaactgaaggtgtactccaagaggatcggagagatg
ggggcgggtcaaaccgagggacaaacgtctccaggacagatggtggacgagccgattcac
cccgtcaacattcctcgcagggagaaagatttccaagggatgctggagtacaagaaggag
gatgaactgaaactggtcaagaacctcatccttgagctgaagcctcgtggtgtggccgtg
aatctgatcccaggtctgccggcctacatcctgttcatgtgtctgagacatgcagactac
gtcaacgatgaccagaaggtccgcaccctgctcacctcaaccatcaacagtattaagaag
atcctaaagaaacgaggagacgactttgagacggtctccttctggttggcgaacacctgc
cgcttcttacactgtctgaaacaatacagcggagacgaggccttcatgaagcacaacacg
cagagacagaatgaacacactctgtccaacttcgacctggcagagtacagacaggtgatc
agtgacctggccatccagatctaccagcagctgatcaaatgcatggagaacatcctccag
cccatgatagtttctggcatgctggaacacgagaccatccagggagtttcgggggtgaag
cccacgggcctccgtaagcgaacagctagtatcgcagacgagggcacctacacgcttgac
tccatcctgaggcagctcagcgccttccactccaccatgtgccagcacggcaccgacccc
gagctcatcaaacaagtggtgaagcagcagttctacatcatcggagcagtcaccctcaac
aacctgctgctacgcaaggacatgtgctcctggagcaaaggcatgcagatcaggtacaat
gtgagccagcaggaggagtggctcagagacaaaggtctaatggtatgcggagccaaggag
actctggagcctctgatccaggccgcacagctgctgcaggtgaagaaaaagactgacgag
gacgccgatgccatctgctccatgtgcctggccctcaccaccgctcagattgtgaaggtc
ttgaacctctacactccagtcaatgaatttgaggagagagtatcggtgtcattcatacga
accatacagactcgcttgcgagatcgttgcgagagtccgcagttgttgatggacaccaag
atgatttacccggtcactttcccgttcagcccttcctccctcgccctggagaccatccag
atccccagctcgctcaacctgggcttcctcacccgcgtctaa
DBGET
integrated database retrieval system
