Cyclopterus lumpus (lumpfish): 117726258
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Entry
117726258 CDS
T09199
Symbol
tmtc2a
Name
(RefSeq) LOW QUALITY PROTEIN: protein O-mannosyl-transferase TMTC2a
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117726258 (tmtc2a)
Glycosyltransferases [BR:
clum01003
]
O-Glycan biosynthesis
O-linked Man type
117726258 (tmtc2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TMTC_DUF1736
TPR_11
TPR_16
TPR_12
TPR_17
TPR_19
TPR_7
TPR_10
TPR_14
NatA_aux_su
TPR_4
TPR_MalT
FAT
TPR_6
TPR_3
TPR_9
ANAPC3
TPR_21
TPR_15
Motif
Other DBs
NCBI-GeneID:
117726258
NCBI-ProteinID:
XP_034382325
Ensembl:
ENSCLMG00005011247
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All DBs
Position
23:6852399..6897188
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AA seq
861 aa
AA seq
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MITELVCTAVAVGLYLNTLDADFCYDDSRAIKTNQDLLPETPWSNILFDDFWGTLLTHSG
SHKSYRPLCTLSFRLNYTLHGQRPWGYHLLNVVLHGLVSALFTAFSRPLLGGGPWSLLAG
LLFASHPVHTEAVAGVVGRADVGAALFFLLSLLCYARHCGLRGDPRGTLPTEPCGGSSVG
RCWAWMLGSLWCAAASMLWKEQGVTVLAVSVVYDLFVFQRLRLRQALLLLLGKKKNISVL
LSLGVLASWGVILLSARLYWMGNKPPNFSNSDNPAADSPHFLTRTLTFLHLPVANAWLLL
CPDKLSFDWSMDAVPLVRSLADWRNLHTVAFYGGFVLLSLFGLRGRTSISKETNGKAYVT
NGKSITNGNGYHAPDTNHNTDPGPAKTTLNGSAGLHHCPPRTSLPPTENLVLFSLGIVSL
PFIPATNLFFYVGFVIAERVLYIPSIGFCLLVAAGARNLYVRLRTRGCKALMLILCAGLV
LLNGLRTVQRNRDWSNEENLYKSGISVNPAKAWGNLGNVLKNQGEMAEAEKAYRNALHHR
RNMADMLYNLGLLLQENERFSEALHYYKLAIGSRPTLASAYLNTGIILMNQGNLQEAKRT
FLTCADIPDENLKDPHAHKSSVTSCLYNLGKLLHEQGQQEEALSVYKEAVQKMPRQFAPH
SLFNMMGEAYMRLNKLDQAGHWYRESLRAKPDHIPAHLTYGKLLSSIGQKTEAEKYYLRA
IQIDPTKGNCYMHYGQFLLEQARLGEAAEMAERAAELDSSEFDVVFSAAHMLRQASLNEA
AERQYERAASLRSEYPAALMNLGAILHLNGKLPEAEANYLRALQLKPDDVITQSNLRKLW
NIMERQGLRIKRGLGMQNGDL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgatcacggagctggtgtgcaccgccgtggcagtgggtctctatctgaacacgctggac
gcagatttctgctacgatgacagccgagccattaagaccaaccaggaccttctccccgag
actccgtggagcaacatcctgtttgacgacttctggggcaccctgctcactcacagcggc
agccacaagtcctaccgtcccctctgcaccctctccttccgcctcaactacaccctgcat
ggccagcggccctggggctaccacctgctgaacgtggtgctgcacgggctggtcagcgcc
ctcttcacggccttcagtcgcccgcttctcggcggcggaccgtggagcctgctggccggc
ctactctttgcctcccatccggttcacactgaagcggtcgccggcgtggtcggcagggcg
gacgtcggcgccgcgctgttctttttgctgtcgctcctctgctacgcgagacactgtgga
ctccgcggggacccgcgtgggactcttccgacagagccatgtggcggcagctcagtcggc
cggtgctgggcctggatgctgggcagcctgtggtgtgcagcagccagtatgctgtggaag
gagcaaggggtgacggtgctggccgtgtcggtcgtgtacgacctcttcgtgtttcagaga
ctccggttgcgccaggcgcttctcctcctgctgggaaagaaaaagaacatcagtgttttg
ctgagtcttggtgtgctggcttcctggggagtgatcctgctgtctgctcgcctctactgg
atgggaaataagcctcccaacttctccaactctgacaaccctgcggctgactccccacat
tttctcactcgaacactaacgttcctccacctgccggttgccaacgcatggctgctgctg
tgccccgacaagctcagttttgattggtccatggatgctgtgcccttggtcaggtcattg
gccgactggaggaaccttcacactgttgccttttatggtggatttgtcctcctgagtttg
tttggcctccgtggccgcacctccatatccaaggagaccaatgggaaagcctatgtcacc
aatgggaaatcaatcaccaatgggaatggttaccatgcccctgacacaaaccataacaca
gacccggggccagcgaagaccaccctaaacgggtcagctggactccaccactgccctcca
cggacgtccctgccccctacagaaaacctagtactattttcattagggattgtctcattg
cctttcatcccagccacaaacctgttcttttatgtaggttttgttattgcagagagggta
ctatacatccccagtataggcttttgtttactggttgctgctggtgcaagaaacctgtac
gttagactgaggacacgaggctgcaaggccttaatgttgattctctgtgcgggactagtg
ctgctgaatggactccgaactgttcaaagaaacagggactggagcaacgaggagaatctc
tacaagtctgggattagtgtgaatcctgctaaagcctggggaaacttggggaatgtacta
aagaaccagggtgagatggcggaggcagagaaggcatacagaaacgctctgcaccaccga
aggaacatggccgacatgctgtataaccttggcttgctgctgcaggagaatgagcgtttc
tctgaagcactgcattattacaaactggccattgggagtcggccaacactggcatcggcc
tacttgaacacaggaatcatcctgatgaaccagggcaacctgcaggaggccaagcgcacc
tttctgacttgtgccgacattccagatgagaacttgaaggacccccacgcccacaagagc
tccgtcaccagctgcctgtacaacctgggaaaactgctccatgaacagggccagcaggag
gaggcgctgtctgtttataaggaagcggtacagaaaatgccccgacagtttgcaccgcac
agccttttcaacatgatgggagaggcctacatgaggctgaacaagctggaccaagcaggt
cattggtacagagagtccctcagggccaagcctgaccacatcccagcccaccttacttat
ggcaaactcctgtccagcattggacagaagacagaagcagagaagtattacctgagagcg
attcaaatagacccgactaaaggaaactgctacatgcactatggccagttcctgctggag
caggctcgtcttggcgaggcggcggagatggccgagagagctgcagagctggacagctca
gagttcgatgtggtcttcagtgctgctcacatgctcagacaggccagtcttaatgaggca
gcagagaggcagtatgagcgtgcagccagcctgagatcagaatacccggctgccctgatg
aaccttggtgccatcctccacctgaatgggaaacttcccgaagcggaggccaactacctg
cgtgcgctccagctcaaacccgatgatgtcatcacccagtccaatctgcggaagctgtgg
aacatcatggagaggcagggactccggatcaagcgtgggctcgggatgcagaacggcgac
ctttga
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