KEGG   Cyclopterus lumpus (lumpfish): 117726359
Entry
117726359         CDS       T09199                                 
Symbol
pop4
Name
(RefSeq) ribonuclease P protein subunit p29
  KO
K03538  ribonuclease P protein subunit POP4 [EC:3.1.26.5]
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    117726359 (pop4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:clum03009]
    117726359 (pop4)
   03016 Transfer RNA biogenesis [BR:clum03016]
    117726359 (pop4)
   03029 Mitochondrial biogenesis [BR:clum03029]
    117726359 (pop4)
Enzymes [BR:clum01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     117726359 (pop4)
Ribosome biogenesis [BR:clum03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     117726359 (pop4)
Transfer RNA biogenesis [BR:clum03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    117726359 (pop4)
Mitochondrial biogenesis [BR:clum03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    117726359 (pop4)
SSDB
Motif
Pfam: RNase_P-MRP_p29
Other DBs
NCBI-GeneID: 117726359
NCBI-ProteinID: XP_034382488
Ensembl: ENSCLMG00005000926
UniProt: A0A8C2WFX7
LinkDB
Position
3:complement(8663834..8668916)
AA seq 223 aa
MDETIVRANIPQDLVKVLGVEPQTKSKAEAFTRSFLKNSIRPNSRTDPKSMLSHKAVLLE
YARPKKDKSKRKSKRAKGLNARQKRAMKIFQIKPEHQRYKLFLPLHDLWRQYVIDLCNGL
KPTCTPQFVQQKLLKADFHGAIITVVRSKCPSYVGATGILVQEFKHIFKIITKEDKLKVI
PKRNSVFEVEINGFVSHIYGSRFEQRASERSAKKFKVRGTIDL
NT seq 672 nt   +upstreamnt  +downstreamnt
atggacgaaacgattgttcgagccaacattcctcaggatctggtgaaggttctcggtgtt
gagccccagaccaaatctaaagccgaggccttcacccggtcgttcctgaagaacagcatt
cggccgaactcgcgaactgatccgaagagcatgctgagtcacaaggcggtgcttctggaa
tacgccaggcccaagaaggacaagtccaagaggaagagcaagagagccaaaggactgaac
gctcggcagaagagggcgatgaagatcttccagattaagccggagcaccagagatacaaa
cttttcctgcctctgcatgacctctggagacagtacgtcattgacctgtgcaacggattg
aaaccgacatgcactccacagtttgtgcaacagaagcttctgaaggcagacttccacggt
gccatcatcacagtggttcgctctaaatgcccatcatatgtcggcgccacagggattctc
gtacaagagttcaaacacatcttcaaaatcatcaccaaagaagacaagctgaaagtgatc
cccaagaggaacagcgtgttcgaggtggagatcaacggcttcgtctcgcacatctacggg
agccggtttgagcagcgagccagcgagcgctcggccaagaagttcaaagtgagaggaacc
atcgacttgtga

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