Cyclopterus lumpus (lumpfish): 117726372
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Entry
117726372 CDS
T09199
Symbol
ptprr
Name
(RefSeq) receptor-type tyrosine-protein phosphatase R isoform X1
KO
K04458
receptor-type tyrosine-protein phosphatase R [EC:
3.1.3.48
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117726372 (ptprr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117726372 (ptprr)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117726372 (ptprr)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117726372 (ptprr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Tc-R-P
DSPc
PTP-SAK
Y_phosphatase3
PTP-NADK
PTPlike_phytase
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
117726372
NCBI-ProteinID:
XP_034382503
Ensembl:
ENSCLMG00005014671
LinkDB
All DBs
Position
23:16164860..16191268
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AA seq
676 aa
AA seq
DB search
MSCRRGRGALLTMFLFLCLTCTRLLLTESSSVDRELRLFPSRRPPPPDRHHPPDVDAVLE
SHRHPHHHHHLHLHRHHQRPARFATVAPAALSEPRPPHAAVSARHLLTVYLAVDVRRLNV
SLLRWFREGVAAALGVPTGHVHINRLNEKKNGIELFVSSDRPGISEPRPAEEVIQSLNVR
VLHRHLGHFGITEVSTEENVLQGEQRDHVWSGEGFYTVVLFFTIFVIVITCLMVLYRLRE
KVQVSDRQLKAPPPDLHLTPTVHLDSAQRSKGTKVSGSMVQAERPPTVATPIRHQQPIVA
CRRLAPPPVVPLPSSAPTPVFDSHAPLAATANNELKLCPSPFRMKPAAGLQERRGSNVSL
VLDMSALGSVEPLNAAAAIVTPREAVREYLLAAGRPLTRQQLRDVVNNTDKLHAEFAEIP
MNFIDPKELDIPNHGTKNRYKTILPNPHSRVILKSKSCNDPLSSYINANFIRGYLGDERA
FIATQGPMVNTVNDFWQMAWQEEAPAVVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVNA
VRQCEHYTARSLTLKCGNQTRELQHYWYTSWPDHKTPDSTVPLLQLMDDVEEERRAADTT
GPVVVHCSAGIGRTGCFIATTIGCRQLQLEGAVDVLSVTCRLRADRGGMIQTGEQYEFVH
HALSLYEARLSAETGQ
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcaggagaggaagaggagcgctcctcaccatgtttctcttcttgtgcctaaca
tgcacgcggctgctgctcacagaatcgtcgtctgtcgaccgcgagcttcgcctcttccct
tctcgtcgacctcctccacccgaccgccaccacccgcccgatgtggacgccgtgctcgag
tcccaccgccacccccaccaccatcaccaccttcatcttcatcgtcatcatcagcgcccc
gcccggttcgccacagtggcgcccgccgccctctcggagccccgccctcctcacgccgct
gtgtctgcacgccacctgctgaccgtgtatctggctgtggatgtgaggaggctgaacgtc
agtcttcttcggtggtttcgggaaggtgtggcggcggcgctgggcgttcctacgggacac
gtgcacatcaaccggctgaacgagaagaagaatggcatcgagctcttcgtgtcctccgat
aggccggggatctccgagccccgccccgccgaggaggtcatccaatccctgaacgtccgg
gtcctccaccgccacctggggcacttcggcatcactgaggtctccacagaggagaacgtc
ctgcagggcgagcagagggaccacgtgtggagcggagaaggtttttacaccgtcgtcctc
tttttcaccatcttcgtcatcgttatcacctgcttgatggttttgtaccgactcagggag
aaggtccaggtttctgacagacagctgaaggctccgccccctgacctccacctgaccccg
actgtccacttggactcggcccagaggtcaaagggcaccaaggtttcaggaagcatggtc
caagctgagcgccctccaactgtagccacgcccattcgccatcagcagccaatcgtagct
tgccgccgccttgcccctccccctgtcgtccctctgcccagctccgcccccactcccgtt
ttcgacagccacgcccctctggccgcgacagccaataacgagctgaagctctgcccctcc
cccttcaggatgaaacctgcagccggactgcaagagagacgcggctccaacgtctctctg
gtcctggacatgtcggctctcggctccgtggagccgctcaacgccgccgccgccattgtg
acgcccagagaggcggtcagagagtacctgctggcggccggtcggcctctgacgcggcag
cagctccgcgacgtcgtcaacaacacggacaagctgcacgccgagttcgctgaaattccc
atgaattttattgatcccaaggagctcgatattccaaaccacgggaccaagaaccgatac
aagaccatactgcccaaccctcattccagagtgatcctgaagtccaagagctgcaacgac
ccgctgagctcctacatcaacgccaacttcattcggggttaccttggtgacgagagggcg
ttcatcgccacccagggccccatggtgaacacggtgaacgacttctggcagatggcctgg
caggaggaggcgccggccgtggtgatgatcaccaaactgaaggagaagaacgagaagtgc
gtcctgtactggcccgagaagagggggatctacgggaaggtggaggtgttggtgaacgcc
gtcaggcagtgtgagcactacaccgcccgcagcctcacgctcaagtgtgggaatcaaacc
cgcgagctgcagcactattggtacacgtcgtggcccgaccacaagacccccgactccacc
gtgccgctgctgcagctgatggacgacgtggaggaggagagacgggcggccgacaccacg
ggaccagtggtggtccactgcagcgccgggattggccggacgggctgcttcatcgccacc
acgataggctgtcggcagctgcagctggagggggcggtggacgtcctgagcgtcacctgc
cggctccgagctgacagaggcggtatgatccagacaggtgagcagtacgagttcgtccac
cacgccctgagtctgtacgaggcccgcctttctgcagaaaccggccaatga
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