Cyclopterus lumpus (lumpfish): 117726430
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Entry
117726430 CDS
T09199
Symbol
samm50l
Name
(RefSeq) sorting and assembly machinery component 50 homolog B
KO
K07277
outer membrane protein insertion porin family
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117726430 (samm50l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
clum03029
]
117726430 (samm50l)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117726430 (samm50l)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
117726430 (samm50l)
Transporters [BR:
clum02000
]
Other transporters
Pores ion channels [TC:
1
]
117726430 (samm50l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
DUF4277
Motif
Other DBs
NCBI-GeneID:
117726430
NCBI-ProteinID:
XP_034382603
Ensembl:
ENSCLMG00005019420
UniProt:
A0A8C3G889
LinkDB
All DBs
Position
23:1941162..1949213
Genome browser
AA seq
470 aa
AA seq
DB search
MGTVHAKSLDPLPMHGRDLGVHPDDLVEPPEPEQESKQEILENKDVVVQHVNVQGLGRTK
EDLLGYEISEVFHAKNLIDVMKKSHIARQRLLRLGIFKEVEVLIDTSEGSDALPNGLDVT
FEVTEVKRLTGSYNTMVGNNEGSMVLGVKLPNTFGRAEKLTFQFSYGTKETSYGLSFFKP
QPGHFDRNLTLNMYKVTGQFPWSSLKETDRGGSAEFNFPLGMTNHTLKWEGVWRELGCLA
RSASFAVREESGHSLKSALSHTVSIDSRNSAIFPSRGALLRINQELAGYTGGDASFLKED
FELQLNRRLFWDSVLSASLWGGMLCPIGRQPSCIADRFYLGGPTSVRGFGMYSIGPQSEG
DYLGGEAYWAGGLHLYTPLPFRPGKGGFGDLFRTHFFLNAGNLCNLNYGDGPRAHLQKLA
ECLRWSYGAGIVLRLGNIARLELNYCVPMGVQSGDRICDGVQFGAGIRFL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgtccatgctaagagcctggatcctctcccgatgcatggccgggacttgggg
gtccaccccgacgacctagtggagcctccggaaccggagcaggagtccaagcaggagatc
ctcgaaaacaaagatgtggtcgtccagcacgtcaacgtccagggtcttgggagaactaaa
gaggacctgctcggctacgagatctctgaggttttccacgccaaaaacctcatcgacgtg
atgaaaaaatctcacatcgccagacagaggctgctccgtctgggcatcttcaaagaggtg
gaggttctgatcgatacgtcggaaggttcggacgctttgcccaacggcctggatgtaacc
tttgaggtgacggaggtcaagaggctgacgggcagctacaacaccatggttggcaacaat
gaaggaagcatggtgctgggtgtgaagttgcccaacacgttcggtcgagcagagaaactc
accttccagttctcctacgggaccaaggagacgtcctacggcctgtccttcttcaagccc
cagccgggccactttgatcgcaacctcaccctcaacatgtacaaagtcaccggtcagttc
ccatggagctccttaaaagagaccgacagaggcggatctgcagaatttaattttcctctg
gggatgaccaaccacacgctgaagtgggagggcgtgtggcgggagctgggctgcctggca
cgcagtgcgtccttcgccgtgcgcgaggagagcggacactcgctgaagtctgccctctcg
cacactgtgtcaatcgattcaaggaactccgccatcttccccagccggggtgccttactc
cggatcaaccaggaactggcggggtacacaggaggagacgccagcttcctgaaggaggat
tttgagctgcagctcaacagacggctcttctgggactcggtcttgtctgcgtctctgtgg
ggggggatgctttgtcccatcggaagacagccgtcctgcatcgctgacaggttctacctc
gggggtcccaccagtgtgcgaggatttgggatgtacagcatcgggccgcagagtgaaggt
gactatctgggtggagaggcgtactgggcaggcggcctgcacctctacactccgctgccc
ttcagaccgggcaagggaggcttcggagaccttttcagaacgcacttcttcctcaacgcc
ggcaacctctgcaacctcaactacggcgacggcccccgagcacacctccagaagctggct
gaatgtctccgctggtcgtacggagcaggcatcgttctgcggctcggcaacatcgccaga
ctggagctcaactactgcgttcccatgggagtccagagtggagacaggatatgtgacggt
gtccagttcggagcagggattcgcttcctgtga
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integrated database retrieval system
