Cyclopterus lumpus (lumpfish): 117726450
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Entry
117726450 CDS
T09199
Symbol
rpap3
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117726450 (rpap3)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117726450 (rpap3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
RPAP3_C
TPR_11
TPR_8
TPR_16
TPR_14
TPR_12
TPR_BSK1_C
TPR_19
TPR_17
TPR_9
TPR_6
ARM_TT21_4th
Fis1_TPR_C
ANAPC3
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
117726450
NCBI-ProteinID:
XP_034382636
Ensembl:
ENSCLMG00005021396
UniProt:
A0A8C3ATS4
LinkDB
All DBs
Position
23:complement(4516315..4521564)
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AA seq
657 aa
AA seq
DB search
MSGVNKAIELQLQLRHNAEDLHSFMADMESWETDIKKKDAELRTGVPQEAQKNLPPVRNK
DYKTKMRERKKKKKKKEPTGSDDSTAEEAKEASRIKAYDYKSWDKFDVDKALSEMDKEES
PAESNESNSEEAPADQETALSERKKGNVFFKEEKYDDAVECYTRGMSADPYNPVLPTNRA
TSFFRLKKYAVAESDCNLAIALDSNYFKAYARRGAARFALKKYESALEDYETVLKLDPGN
VEAQNEVGKITETIGHRAPAAPSGATQPQEAPTANPEQQRLVEEQQRRQEAAVQKDRGNA
YFKEGKYEAAVECYSRGMEADSMNVLLPANRAMAFLKLEKYEDAEEDCTKAITLDSTYSK
AFARRATARVALGKLEEAKQDFQEVLKLEPGNKQALNELQKLQINVAPSGLLQTPDGTQR
RAVQPVDKPTHLRSTKPLRRIDIEEVSGEVTASEVESGGSKFFIQEAPREAEDESSPLST
SPSAKMIKIEEMAEVPSHTSNQVPASRLTKQPAQREIASPAEPPASPSSTVAELPPPPAN
SFQLEADLRKVGHQPEVIYRYLRQIKPEAFANIFRNSLEPDVLNQLLGTLHGFYIKNEAP
AVTLGVLRSLASVRRFDMAVMFLSSSEKKVLKELFDFLHQAAPEGSSVAALQKKYGV
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtgtaaacaaagccattgagttacagcttcagctgcggcacaatgcggaggat
ctgcacagcttcatggcggacatggagagctgggagacggatatcaagaagaaggatgcg
gagctgaggacgggagtacctcaggaggcccagaagaatctcccccctgtgcgcaacaaa
gactacaaaacaaagatgagggaaaggaagaagaagaagaagaagaaggagcctacgggc
agcgacgactcaacggcggaggaggccaaagaagcatcaaggataaaagcatacgactat
aaatcatgggacaagtttgatgtggacaaagctctgtcggagatggataaggaggaaagt
cctgcagagtcaaatgagtcgaactctgaggaagcgccagctgatcaagagacggctctt
tctgagagaaaaaagggcaacgtgtttttcaaagaggagaagtacgacgatgctgtggag
tgttacaccagagggatgtctgcagacccttacaaccctgtgcttcccacaaaccgagcc
acctccttcttcagactcaaaaagtatgctgtggcagagtctgactgcaacttggcaata
gctctggacagcaactactttaaagcgtatgcacggagaggagcggcacggtttgcgctg
aagaaatacgaatctgcattagaagattatgagacggttctcaagcttgaccccgggaat
gtggaggcacagaacgaagtgggaaaaatcacagagactatcggtcatcgagcaccggcc
gccccaagtggagccacacagccacaggaggctcccacagcgaaccctgagcagcagaga
ctggtggaggagcagcagagacgacaggaggcggctgtacaaaaagacagagggaacgcc
tatttcaaagaggggaagtatgaagcggctgtcgagtgctacagcagaggcatggaggcg
gacagcatgaacgtcctgctgcccgccaacagagccatggccttcctcaagctggagaag
tatgaggacgcagaggaggactgcaccaaagccattactctggacagcacttactccaag
gctttcgcccgccgtgccaccgccagagtggctttagggaaactggaggaggccaaacaa
gattttcaagaggtgttaaaactggaaccagggaacaagcaggccctgaatgagctccag
aaactccagattaacgtggcacctagcggccttctccagacaccagacggcacacagagg
agagccgttcagccggtagacaaaccaacacatctgcggtcaacaaaacccctgaggagg
atcgatatcgaggaagtgagcggcgaggtgaccgcgtctgaggtggagtccggtgggtcc
aagttcttcatccaggaggctccgcgggaggccgaggatgaatcctctccgctgtcgacg
tcaccgagcgccaagatgatcaagattgaggagatggcagaagtcccctcgcacacatct
aaccaagtccctgcgagcaggctgaccaaacagccagcgcagagggaaatcgcttccccg
gctgaaccgccagcgagcccctcctccacagtagcggagctgccccccccacccgccaac
agcttccagctggaggccgacctccgcaaggtcggacaccagcccgaagtgatttacaga
tatctgaggcaaatcaaacccgaggcgttcgcaaacatcttccgcaactccctcgaaccg
gacgttctcaatcagctcctggggacactgcatggtttctatatcaagaacgaagccccg
gccgtcacgctgggggtcctcaggagcctggcgagtgtgaggcgcttcgacatggctgtc
atgttcctgtcgtcctcggagaagaaagtgcttaaggaactgtttgacttccttcaccaa
gcggcgccggagggatcgtcagtcgcggccttgcagaagaagtacggcgtgtga
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