Cyclopterus lumpus (lumpfish): 117726453
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Entry
117726453 CDS
T09199
Symbol
parpbp
Name
(RefSeq) PCNA-interacting partner
KO
K27412
PCNA-interacting partner
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clum03400
]
117726453 (parpbp)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117726453 (parpbp)
TLS (translesion DNA synthesis) factors
Other TLS factors
117726453 (parpbp)
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GFIT
Other DBs
NCBI-GeneID:
117726453
NCBI-ProteinID:
XP_034382640
Ensembl:
ENSCLMG00005018804
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Position
23:complement(13985093..13995534)
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AA seq
585 aa
AA seq
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MEALGENLKVMVKIFRRECHRVLPSERTTIHGADGMLMLLQLAMAEVSKQRAGEFKVALS
DVLMAWKHLLLDKLHLPPPNFARLENYDLILEAYESSLKRSNAVDLVDVLSMYNQLRLVD
SDPGEPVSPIQLFEFLSGNTEVSELPDPSVPSTPSRKSTTCSSQVTMAVRRVFCSYLSLL
TNAKNDMALALTLDVPGRALGRQAFTDVKHAARDNNTSLFLAVTSFVRVIQLGGRGYAPA
ESDPLRKHVKGLSDFVQFLDNLEEILGEVPDPSACGARLAGAIRALLVKGRSGGDAVSAA
ADETTKELKERICQLHQVQTHTANGSGTEISPARPRAHAVNHCTALGGRDTVKVLMALLD
EEALTPPCRNKADLLSEDQPVLGGEEGTCVLGLFRSPEVPTGCSPEPLKSRVLTRLDLLK
PKAKDGGVRSQFACTYKEDEMPLNRVLEFPSASQVPSCVHPAPKHQALPADVEETPTEAK
STSECPNKEPSAVRRGAALGPRSGNVQTGGAGSGDGKPPVTRTQRKGNKRKQVDSDRRGG
SENEPPQKKPPACVSVKVPGKSGGKAASKKKLIAGQGKLTGFFRV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaggctttgggagaaaatctaaaggtgatggttaaaatcttcaggcgagagtgccac
agggttttgccctctgagaggaccaccattcatggagctgatggcatgttgatgttgctg
cagctggccatggcagaggttagcaagcagcgcgctggagagttcaaagtggctctgagt
gatgtcctgatggcctggaaacacttactgctagacaaacttcacctgccacccccaaac
tttgcacgcctggagaactatgatctcatcctggaggcgtacgaatcctccctgaaacgc
tccaacgccgtggacctggttgatgtcctctccatgtacaaccagctgagactagtggac
tcggacccgggggagcccgtgagcccgatccagctgtttgagttcttatccggaaacacg
gaggtgtcagagttgcccgacccttcagtcccgtcaacgccgtctcgtaaaagcacaacc
tgcagctcccaggtgacaatggcggtgaggcgggtcttctgctcctacctgagtctgctc
acgaacgccaagaacgacatggccttggcgctgaccctcgacgtccccggtcgcgctctc
ggacgccaggcgttcaccgacgtgaagcatgcggcgcgcgacaacaacacctctcttttc
ttggcggtgacgtctttcgtgagggtcatccagctcggagggaggggctacgctccggcg
gagtctgaccccctgaggaaacatgtcaaaggcctgtctgactttgtccagtttctagac
aacctggaagaaatactgggagaagtccctgacccgagtgcgtgtggagcccggctggcg
ggcgccatccgggcgctgctggtgaagggacgcagcggcggagacgccgtgagcgccgcg
gcggacgagacgacaaaggagctgaaggagaggatctgccagctccaccaggtccagacg
cacaccgccaatggaagcgggacggagataagccccgccaggcccagggctcacgcagtc
aaccactgcactgcgttgggaggccgggacaccgtgaaggtgctgatggcgctgctggac
gaggaggcgctgacgccgccgtgtcggaacaaggccgacctgctgtcggaggaccagccc
gtcctcggtggggaggagggcacctgcgtcctgggcctgttcagatcccccgaagtgccg
actggatgttctccagaacctctaaagagccgagtcctgacccgactagacctgctcaag
cccaaggccaaagacggaggagttcgatcccagtttgcgtgcacgtacaaagaggatgaa
atgccactcaaccgggtgctggagttccccagcgccagccaggtgccttcctgtgtgcac
ccggcacccaaacaccaagccctcccggctgatgtggaggagacgcccaccgaagccaag
tctacttctgaatgcccgaataaggagccgagcgccgtgcggcggggtgccgctctcggg
ccaagaagtggaaacgtccaaaccggaggggcgggctccggtgacggaaagccacctgtc
actcggacgcagcgaaagggcaacaagaggaagcaggtggactccgaccgacgcggagga
tcggagaacgagccgccgcagaagaaaccgccggcttgtgtctcggtcaaagtgcccggc
aagagcggcggcaaggccgcgagtaagaagaagctgatagccggacagggaaagctaacc
ggcttcttcagggtctaa
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