Cyclopterus lumpus (lumpfish): 117726464
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Entry
117726464 CDS
T09199
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117726464 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clum03400
]
117726464 (apex1)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117726464 (apex1)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117726464 (apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
117726464
NCBI-ProteinID:
XP_034382653
Ensembl:
ENSCLMG00005010397
LinkDB
All DBs
Position
23:3448274..3451740
Genome browser
AA seq
312 aa
AA seq
DB search
MKRGKKAEEEVAAADGENDAGSGSAKKTKKAKEPEAPILYEDPPDKMTSKDGRDANMKIT
SWNVDGLRAWVKKNGLDWVREEAPDVLCLQETKCGEKSLPADITSMPEYPHKYWAASDEK
EGYSGTAMLCKTEPIKVTYGIGKEEHDKEGRVITAEFPTFYLVTAYVPNSGRGLVRLDYR
KTWDEDFRAYLSELDMQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTPEEREGMDQLLE
AGFTDSFRELYPEQANAYTFWTYMMNSRGKNVGWRLDYFILSSSLLPGLCDNKIRNKALG
SDHCPITLHIAV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggcaagaaggcagaagaggaggtggcggccgcggacggggagaatgacgca
ggctccggttcggcaaagaaaaccaagaaggctaaggaaccagaggccccgatattgtac
gaggaccctccagacaaaatgaccagcaaagatggccgcgacgccaacatgaagatcacc
tcctggaacgtggatggcctgagggcctgggtgaaaaagaacggcctggattgggtgcgc
gaggaggctccagatgttctgtgcctgcaggagacaaagtgtggagagaaatccctcccc
gccgacatcacctcgatgccagagtaccctcacaagtactgggccgcgtcagatgagaag
gagggttacagtggtacggccatgctgtgcaagactgaacccatcaaagtcacctatggc
attggcaaagaagagcatgacaaggagggccgcgtcatcaccgccgagttccccaccttc
tacctggtgaccgcctacgtgccgaactccggcagaggccttgtgcgcctagattaccgc
aaaacctgggacgaggacttccgggcatacctgagcgagctggacatgcagaagcctctg
gtgctgtgcggcgacctcaacgtcgcgcaccaggagatcgacctgaagaaccccaagggg
aacaagaaaaacgctggcttcaccccggaggagcgcgagggcatggaccagctgctggag
gccggtttcaccgacagcttccgcgagctctacccagagcaggccaacgcctacaccttc
tggacctacatgatgaactcccgcggaaagaacgtgggctggaggctggattacttcata
ctgtcgtccagcctgctgccgggcttgtgtgacaacaagatccgcaacaaggccctggga
agcgaccactgccccatcactctgcacatagccgtgtag
DBGET
integrated database retrieval system
