Cyclopterus lumpus (lumpfish): 117726479
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Entry
117726479 CDS
T09199
Symbol
epyc
Name
(RefSeq) epiphycan
KO
K08127
epiphycan
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
clum00535
]
117726479 (epyc)
Proteoglycans [BR:
clum00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
117726479 (epyc)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
117726479
NCBI-ProteinID:
XP_034382682
Ensembl:
ENSCLMG00005010607
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All DBs
Position
23
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AA seq
603 aa
AA seq
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MRMLVRLVLGLFVLKAVVAGPRFSRQVDLDTYDTANYDVDLDNSNLENQDIYDYEDGLTI
DDPQIEIGTLAPPDYNYPVPGASLEEQEEEEEEEELPLTPQLVPQGSGGSGVLMGPDTQK
EVELRLTPFDILHESGDFGGSAGSGASGASGSSGSGESGDLLVSSGSGGSGDVILISGAS
EELFSSGGSGEFLVSGDLLISGDFLISGDLLISGDLSGSGVISGASGDLGSGISIEFPLG
SGGSGDQFGSGFSGDLLISGASGSSGVSGDSDESGDSGITLLSGEEELPLIPEPTPSEAS
GASGEFLGASGTSGASGDLGESGDLGFSGSSGDSVVSGSGETEVPEVTLVPDTDKEEGLL
PATPKTPQEGTGGVEGSVSSGEPDEPEEPVIDRKGMPTCLLCTCLGGSVYCDDLKLDSVP
PLPKDTTHFYARYNRITKINKSDFAFMNKLKRIDLTENEITSIDERAFLGLPELEELVIR
ENHISQLPALPETMSLIDASHNNIGSKGIHNEAFKDMTSLLYLYLTDNHIDYIPVPLPDS
LRSLHLQRNNIQMMHGDTFCNLKDFNYIRNALEDIRLDGNPINLSRTPQAYICLPRIPIG
DLI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgcttgtgcggctcgtgttgggactcttcgtcctcaaagcggtggtggccggc
cccagattttcccgacaggtggacttggacacatacgacactgccaactatgatgtggat
ctagacaattcaaatttggagaaccaggatatctacgactatgaagatgggctgacaatc
gatgatcctcagatagagattggaacactggccccacctgactataactaccctgtgccc
ggggcctcgttggaagagcaagaagaagaggaggaggaggaagagttgcccctaacaccc
cagctcgtccctcagggttcagggggatctggggttctcatgggcccagacacacagaaa
gaggtggagctgcgtctgacgccctttgacatccttcatgagtccggggattttgggggc
tccgcagggtccggggcctcgggagcttctgggtcttctgggtcgggagaatccggagac
ctgctggtctccagcggctccgggggttctggtgatgttatcctgatctccggagcctcc
gaggagctcttcagctcggggggatccggggaattcttggtatctggggatctcttgata
tctggggatttcttgatatctggggatctcttgatatctggggatctctctggatccggg
gttatttctggagcctccggtgaccttggctctgggatatccattgaattccccctgggc
tccggagggtctggggaccagtttggttctgggttctctggggatctcttgatctcaggg
gcctccggaagctctggggtttccggggactctgatgagtctggtgactcagggataaca
ttgttatctggagaggaggaactgcccctcattcctgagcctacccctagcgaggcgtca
ggtgcttcaggggagttcttaggagcttcaggaacctcaggggcctctggggatcttgga
gagtctggagacttagggttctctggatcctctggggattctgttgtctctggctctgga
gagacagaggtccctgaggtaactctggtccctgacactgataaagaggaggggctgctt
ccagctacaccaaaaacccctcaggagggtactggcggtgtagaagggtcagtgagctct
ggtgaacctgacgagcccgaagagcctgtgattgacaggaaaggtatgcccacttgcctg
ctgtgcacgtgcctcggtgggtcggtctactgtgatgacttgaagctggacagcgttcca
cctcttcccaaagacaccactcacttctacgcccgctacaacagaatcaccaagatcaac
aagtccgacttcgccttcatgaacaagctgaagaggatcgacctgaccgaaaacgagata
acgtccatcgatgagcgagcatttttgggtctgcctgagctggaggagctggtgattcga
gaaaaccacatctcccagctgcctgctctcccagagaccatgagcctgatcgatgccagc
cataacaacattggcagcaagggcattcacaacgaggcgttcaaagatatgacgagcctg
ctgtacttgtacctcacagacaaccacattgattacatccccgtgcctctaccagacagc
ctgcgctcactacacctacagcgtaacaatattcaaatgatgcacggggacaccttctgc
aacctgaaagacttcaactacatcaggaacgcactggaggacatccgtctggacggcaac
cccatcaacctcagcaggaccccgcaggcttacatctgcctgccccgtatccccatcggg
gatctcatttaa
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