KEGG   Cyclopterus lumpus (lumpfish): 117726479
Entry
117726479         CDS       T09199                                 
Symbol
epyc
Name
(RefSeq) epiphycan
  KO
K08127  epiphycan
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:clum00535]
    117726479 (epyc)
Proteoglycans [BR:clum00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class III
    117726479 (epyc)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 LRRNT LRR_9
Other DBs
NCBI-GeneID: 117726479
NCBI-ProteinID: XP_034382682
Ensembl: ENSCLMG00005010607
LinkDB
Position
23
AA seq 603 aa
MRMLVRLVLGLFVLKAVVAGPRFSRQVDLDTYDTANYDVDLDNSNLENQDIYDYEDGLTI
DDPQIEIGTLAPPDYNYPVPGASLEEQEEEEEEEELPLTPQLVPQGSGGSGVLMGPDTQK
EVELRLTPFDILHESGDFGGSAGSGASGASGSSGSGESGDLLVSSGSGGSGDVILISGAS
EELFSSGGSGEFLVSGDLLISGDFLISGDLLISGDLSGSGVISGASGDLGSGISIEFPLG
SGGSGDQFGSGFSGDLLISGASGSSGVSGDSDESGDSGITLLSGEEELPLIPEPTPSEAS
GASGEFLGASGTSGASGDLGESGDLGFSGSSGDSVVSGSGETEVPEVTLVPDTDKEEGLL
PATPKTPQEGTGGVEGSVSSGEPDEPEEPVIDRKGMPTCLLCTCLGGSVYCDDLKLDSVP
PLPKDTTHFYARYNRITKINKSDFAFMNKLKRIDLTENEITSIDERAFLGLPELEELVIR
ENHISQLPALPETMSLIDASHNNIGSKGIHNEAFKDMTSLLYLYLTDNHIDYIPVPLPDS
LRSLHLQRNNIQMMHGDTFCNLKDFNYIRNALEDIRLDGNPINLSRTPQAYICLPRIPIG
DLI
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgaggatgcttgtgcggctcgtgttgggactcttcgtcctcaaagcggtggtggccggc
cccagattttcccgacaggtggacttggacacatacgacactgccaactatgatgtggat
ctagacaattcaaatttggagaaccaggatatctacgactatgaagatgggctgacaatc
gatgatcctcagatagagattggaacactggccccacctgactataactaccctgtgccc
ggggcctcgttggaagagcaagaagaagaggaggaggaggaagagttgcccctaacaccc
cagctcgtccctcagggttcagggggatctggggttctcatgggcccagacacacagaaa
gaggtggagctgcgtctgacgccctttgacatccttcatgagtccggggattttgggggc
tccgcagggtccggggcctcgggagcttctgggtcttctgggtcgggagaatccggagac
ctgctggtctccagcggctccgggggttctggtgatgttatcctgatctccggagcctcc
gaggagctcttcagctcggggggatccggggaattcttggtatctggggatctcttgata
tctggggatttcttgatatctggggatctcttgatatctggggatctctctggatccggg
gttatttctggagcctccggtgaccttggctctgggatatccattgaattccccctgggc
tccggagggtctggggaccagtttggttctgggttctctggggatctcttgatctcaggg
gcctccggaagctctggggtttccggggactctgatgagtctggtgactcagggataaca
ttgttatctggagaggaggaactgcccctcattcctgagcctacccctagcgaggcgtca
ggtgcttcaggggagttcttaggagcttcaggaacctcaggggcctctggggatcttgga
gagtctggagacttagggttctctggatcctctggggattctgttgtctctggctctgga
gagacagaggtccctgaggtaactctggtccctgacactgataaagaggaggggctgctt
ccagctacaccaaaaacccctcaggagggtactggcggtgtagaagggtcagtgagctct
ggtgaacctgacgagcccgaagagcctgtgattgacaggaaaggtatgcccacttgcctg
ctgtgcacgtgcctcggtgggtcggtctactgtgatgacttgaagctggacagcgttcca
cctcttcccaaagacaccactcacttctacgcccgctacaacagaatcaccaagatcaac
aagtccgacttcgccttcatgaacaagctgaagaggatcgacctgaccgaaaacgagata
acgtccatcgatgagcgagcatttttgggtctgcctgagctggaggagctggtgattcga
gaaaaccacatctcccagctgcctgctctcccagagaccatgagcctgatcgatgccagc
cataacaacattggcagcaagggcattcacaacgaggcgttcaaagatatgacgagcctg
ctgtacttgtacctcacagacaaccacattgattacatccccgtgcctctaccagacagc
ctgcgctcactacacctacagcgtaacaatattcaaatgatgcacggggacaccttctgc
aacctgaaagacttcaactacatcaggaacgcactggaggacatccgtctggacggcaac
cccatcaacctcagcaggaccccgcaggcttacatctgcctgccccgtatccccatcggg
gatctcatttaa

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