Cyclopterus lumpus (lumpfish): 117726504
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Entry
117726504 CDS
T09199
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
117726504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117726504
Transporters [BR:
clum02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
117726504
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
117726504
NCBI-ProteinID:
XP_034382711
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All DBs
Position
23:complement(5376727..5384879)
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AA seq
801 aa
AA seq
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MEEAAEDGDKMTSQQALCDPNQGSRKRPGISTLKLFIMALSFACFSKALAGTYMKSSITQ
IERRFDLSSTHVGLIDGSFEMGNLLFLAVVSHFGAKLHRPRLIAVGCFVMAVGAFLTGLT
HFFMGRYKYNTIIQVFQNDSVNIAACVDPLKIEVLEIQIEPSVEDNKTCEGESGSNMWIY
VFLGNALRGIGETPVTPLGISYIDDFARAENSPFYIACLQTITLLGPMFGFLLGSYCAKL
YVDIGYVNIESVTITPKDARWVGAWWMGFMVSSVLLLLSSIPFWFLPRSLPNQEGDKGKP
TPGRDTLDGTEDVPNNNHNLKLTDIAKGFVPSLKRLLGTPSYFLLLCGSILKFNSFIGLF
TFKAKYMEQQFGQSASRANFLIGMLNLPAVAVGIFLGGLLMKRYKLSLVSGAQLSFATSF
MAYLLLLLQFGTKCDNIPMAGLTISYNGTQSVSSDRDMLFSECNRDCSCSAEEWDPVCSD
SGITYISPCMAGCLSSSGYGKNTVFNNCSCVSASFPAGSSRSVRLGQCPHAMDCGRSFTS
YMAVSVLSSFINSLGATPGYMVIIRCISPDLKSLALGIQALVTRTLGGLPAPVYFGALID
STCLKWSIKKCGGRGACRIYDSNMYRIIFLGLITSLSGSSYFFIIAVIVLLRRQFREPER
ETQTSNRKASEGIDLRTASKPTEDDPGPPKPPEVWISFATELEEGEEIHRIVQLPQIGRL
SSSNNSGETQQLKPLTETTVEFTPPSEEAKTEIGGLKSEEEVKEGKDEVCKETDAQVEKE
DHLTDDNVFETETTQTDGIQN
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcagcagaggacggagacaagatgaccagccagcaggctctgtgtgacccc
aatcaggggagcagaaaacgccccggcatctccactctcaaattgtttattatggcgctg
tccttcgcctgcttctcaaaggctctggcaggaacctacatgaagagctccatcactcag
attgagaggcgattcgacctctccagcacacacgttggactcatcgatggcagttttgag
atgggcaacttgttgtttcttgctgtggtcagccattttggggccaagctacatcggccc
agactcattgctgtgggctgtttcgtcatggctgtcggggccttcctcaccggcctgaca
cacttcttcatgggacgctacaagtacaacacaatcattcaagtgttccagaatgacagt
gtgaacatcgccgcctgtgtggatcctctaaaaatagaagtactggaaattcagatcgag
ccctctgtggaagacaacaaaacctgtgagggagagtctggttccaacatgtggatctat
gtgttcctggggaacgctctgcgagggatcggagaaaccccggtcacacctctgggcatt
tcttacatcgacgactttgcgagagcggaaaattcacccttctacatcgcatgtctccag
accatcactctcctgggccccatgtttggtttcctcctgggctcctattgtgccaaacta
tatgttgacattggatatgttaatattgaaagtgtgaccatcactccgaaagatgcccgc
tgggtgggcgcctggtggatgggcttcatggtgtcctccgtcctcctcctcctctccagc
attcccttctggttcctgccccgctcgctgccaaatcaggagggagataagggcaaacca
actcccggccgtgacaccctcgatgggacggaggatgttcccaacaacaatcacaacctc
aagctgaccgacatcgctaaaggttttgttccctcactgaagcgcctgttgggaactcct
tcctactttctgctcctttgtgggagcatcctgaagttcaactcttttatcggcctgttc
acctttaaagccaaatacatggagcaacagtttggacagtccgcatccagagcaaacttc
cttattggtatgttgaacctgccagcggtagcagtggggatcttcctgggagggctgctg
atgaagaggtataagctgagcttggtgtcaggagctcagctctcttttgccacatccttc
atggcatacctccttctgctgctgcagtttggaaccaagtgtgataacattcccatggcc
gggctcaccatctcatacaacgggacgcagagtgtatcatctgacagagacatgctcttc
tcagagtgtaacagagactgctcgtgttcagcagaggagtgggaccccgtgtgctccgac
agcggcatcacctacatctctccatgtatggccggctgcctcagctccagtggatacggc
aagaacacggtcttcaacaactgcagctgtgtgtccgcctccttcccagcaggcagcagc
aggtccgtgaggctgggccagtgtcctcacgccatggactgcggccgcagtttcacctcc
tacatggctgtatctgttctcagctccttcatcaactctctgggagctacacctggctac
atggtcatcatacgatgcatctcaccagatctaaaatcccttgcacttggtatccaggcc
ttagtaactcggactcttggtggacttcctgcacccgtgtatttcggagccctgattgat
tcaacttgcctgaagtggtcaatcaagaagtgcgggggcagaggggcatgtcgcatttat
gactctaatatgtacaggatcatcttcctgggtctgatcactagtctcagtggatcctcg
tatttcttcatcattgccgtcatcgtcctcctcagacgacagtttcgtgagccggagcga
gaaacacaaacgtcgaatagaaaagcttcagagggaattgaccttcgaaccgcatcaaaa
cccaccgaggacgatcccggcccccctaaacctcccgaagtttggataagtttcgcaaca
gaactggaggagggagaggagattcacagaatagtgcagctcccacaaattggccgactc
agttcctcaaataactccggggagacgcaacagctcaaacccctgacagagaccactgtt
gaattcactcctcctagtgaggaagcaaagacggagataggcgggctgaagtcagaggag
gaggtgaaagagggaaaagacgaggtttgcaaggagacggacgcacaggtggaaaaagag
gaccatctcacagatgataacgtgttcgagacagaaacaacacaaacggacggcattcaa
aactaa
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