Cyclopterus lumpus (lumpfish): 117726544
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Entry
117726544 CDS
T09199
Symbol
snd1
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
117726544
NCBI-ProteinID:
XP_034382763
Ensembl:
ENSCLMG00005012045
UniProt:
A0A8C3G383
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All DBs
Position
23:complement(12959536..13110042)
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AA seq
911 aa
AA seq
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MASVSAQAQAAPSPAASLQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGAMAR
RAAQGQPDTKDTPDEPWAFQAREFLRKKLIGKEVCFTVEIKTALGREYGIVYLGRDTTGE
NIADSLVNEGLATVRREGIRGNNPDQARLCDLEDQSKASKKGLWSEGGGTHTIRDVKYTI
ENPRNYIDSLHQKPINAIIEHVRDGSVVRALLLPDHYLVTVMLSGVKCPTFKREADGTES
TEAFAAEAKFFTESRLLQRDVQIILESCPNQIILGSILHPNGNITELLLKEGFARCVDWS
MAVYTQGAEKLRAGERSAKERKVRIWKDYVAPTANLDLKDRQFVAKVMQVVNADAMVVKL
NSGELKTIHLSSIRPPRIEGEEKNKDKDKRFRPLYDIPYMFEAREFLRKKLIGKKVNVTV
DYIRAATGPGESTPAFSERTCATVTIGGINIAEALISKGLATIIRYRQDDDQRSSHYDEL
LAAEARAIKNGKGLHSKKEVPIHRVADISGETQKAKQFLPFLQRAGRSEAVVEYVFSGSR
LKLYMPKETCLITFLLAGIECPRSSRNMPGGVQVAEPFSDEAMLFTKELVLQREVEVEVE
SMDKAGNFIGWLHIEGGNLSVALVENALSKVHFTAERSAYYKTLTSAEDACRERKEKIWA
NYEEKPVEEVVYVTEEKERAANYRAVYVTEICDTLHFYSQDVETGAQLENLMETMRAEIA
AQPPVEGSYAPRRGDICLATFADGEWYRARVEKVESPSRVHVFYIDYGNREVVSSTRLAA
MPPAFGTRTLPAQATEHAFAYIQVPQDEDVRADVVDCIVRDIQNTQCLMNVEYSGATCPH
VTIQFGDTKDDVGLNLVKEGLVMVDVRKEKHLQKIVTEYLNSQESAKSARLNIWRYGDFR
ADDAVEFGYRR
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtttcggcacaagctcaggcagcgccttctccggctgcgtctctgcaaaga
ggaattgtgaagatggtcttgtcaggctgcgccatcattgttcggggccagcctcgaggt
ggcccacccccggagcgtcagatcaatctcagtaatatccgagcaggggccatggcccgt
cgagccgcccagggccagcccgacaccaaggacacccccgatgagccatgggcctttcaa
gccagagagttcctgcggaagaagctaatcggcaaagaagtgtgcttcactgtggaaatc
aagaccgctttgggccgggagtacggcatagtctacctggggcgagacactacaggcgag
aatatcgctgactctttggtgaatgagggcctggccacagtccgccgagaaggaatcagg
gggaacaatccagaccaggccagactctgtgacttggaggaccagtctaaagcttccaag
aagggcttgtggagtgagggtggcggtacacacaccatccgcgacgtcaagtacaccata
gagaacccccgcaactacatcgactccttgcatcagaaacctatcaacgccatcatcgag
cacgttcgagacggcagcgttgttcgtgccttgctgctccccgaccactacctggtcacc
gtcatgctttctggagtcaagtgtcccacgttcaagcgagaagcggacggcacggagtcg
acggaggctttcgcggcggaggccaaattcttcaccgaatcccgtcttctgcagagagac
gttcagatcatcctggagagctgccccaaccagatcatactgggctccatccttcacccg
aacggtaacataacagaactcctactgaaggaaggctttgcccgctgcgtcgactggtcc
atggccgtctacacccagggagccgagaaactcagagctggtgaacgatctgccaaagag
cgcaaggttcgcatctggaaggactacgtggcacccacagccaacttggacctgaaggac
agacagtttgtagccaaggtgatgcaggtggtgaacgctgatgccatggtggtgaagctc
aactctggagaactcaagaccatccacctgtccagcattcgcccccctcgaattgaggga
gaggagaagaacaaggacaaagacaaacgtttccgtccgctctacgacatcccctacatg
ttcgaggcccgagagttcctgaggaagaagctcatcggtaaaaaggtcaatgtgacagtt
gactacatcagagcagctaccggtccgggagaaagcacccctgcattctcagaacgcacc
tgtgccacagtcacaattggcggcattaacatagcagaggctctgatcagtaagggcctg
gccacaatcatcagatacagacaggatgacgaccaacgctcctcccactacgacgagctg
cttgccgcagaggctcgggccatcaagaacgggaaagggctgcacagcaagaaggaggtg
cccatccacagagtggccgatatctctggggagactcagaaagccaagcagtttttgccc
ttcctgcagagggctggccgctcagaagccgtggtcgaatacgtcttcagcggatcccgc
ctcaagctgtacatgcccaaagaaacctgcctcatcacattcctcctcgccggtattgag
tgtccacgcagttccaggaatatgcctggaggcgtgcaggtggccgagcccttcagtgac
gaggccatgctgttcaccaaagagctggtgctgcaaagagaggtggaagttgaagtggag
agcatggacaaagcggggaacttcatcggctggctgcacatcgagggtgggaatctgtcg
gtcgcgctggtagaaaacgctctgtccaaggtccacttcacggccgagcgcagcgcctac
tacaaaaccttgacctcggcagaggatgcgtgccgagagaggaaggagaagatctgggcc
aattatgaggagaaaccagtcgaggaggttgtgtacgtaacggaagagaaggagcgagcg
gccaactacagagccgtgtacgtcaccgaaatctgcgacaccctgcacttctactcccag
gacgtagagacaggggcccagttggagaatctgatggagaccatgagggccgagatcgcc
gcccagccgcccgtggaagggtcctacgctccgcgccgaggggacatctgcctcgccacg
tttgctgacggcgaatggtacagagccagagtggagaaagtcgagtcaccgtcaagggtc
cacgtcttctacattgactacggcaatagagaagttgtgtcgtccactcgtctggctgcc
atgccccctgccttcggcaccaggaccctgccagcacaggccaccgagcatgccttcgcc
tacatccaggtcccacaggacgaggatgttcgcgcggacgtggtggactgcattgtgcgg
gacatccagaacacccagtgcctgatgaacgtggagtactcgggtgccacctgcccacat
gtcacaatacagttcggcgacaccaaggacgacgtgggcctcaacctggtcaaggagggc
ttggtcatggtggacgtccgcaaggagaagcacctgcagaagattgtgaccgaatacctg
aacagtcaagaatctgccaagagtgcccggctcaatatttggcgctacggagacttccgt
gcggacgacgccgtcgagttcggttacagacgttga
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