Cyclopterus lumpus (lumpfish): 117726547
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Entry
117726547 CDS
T09199
Symbol
pacsin2
Name
(RefSeq) protein kinase C and casein kinase substrate in neurons protein 2 isoform X1
KO
K20123
protein kinase C and casein kinase substrate in neurons protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117726547 (pacsin2)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
117726547 (pacsin2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCH
SH3_1
SH3_9
SH3_2
IFT46_B_C
Tho2
Motif
Other DBs
NCBI-GeneID:
117726547
NCBI-ProteinID:
XP_034382770
Ensembl:
ENSCLMG00005016503
UniProt:
A0A8C3G4W9
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All DBs
Position
23:13531902..13548907
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AA seq
492 aa
AA seq
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MSGSYDESMIDVSSDSFWEVGNYKRSVKRVDDGNRLCNDLMSCLHERARIEKSYAQQLTE
WGKRWRQLIEKGPQYGTLEQACSALCTEAEKVSELHMEVKSALMGEDYEKLKNWQRDSYH
KQMIGGYKETKEAEDGFRKAQKPWAKKLKEMEIMKKSYHSACKEEKLAASRENNSKLESN
NNPEAQKKLQEKVEKCQQEAQKTKERYQKSLEELDKLTPQYMENMEQVFEQWQQFEDKRI
CFFRELLLEVKQHLDLSSNHRFQTIYHTLEDTVSATDVEDDLKWFRSNHGPGMPMNWPQF
EDWSIDLNRTLSRREKKKPSEGVTLTGISQTGSDQPVQPAKTSNSLTVPTNAAPVGANPF
DEDEVEDEKEEEEETAVEQQTTVNHISVNKEEIKTASSTEKTPDWSDEDTGANPFSTNGD
GNPFEDEPAAPVVSVAVKALYDYEGQEQDELTFKAGEELTKIGEEDDQGWCRGRLKDGKT
GLYPANYVEDIQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctcctacgacgaatccatgatcgatgtctccagtgacagcttctgggaggtc
ggcaattacaaacgatcggtgaaacgggtggacgacggcaatcggctctgtaacgacctg
atgagctgtcttcacgaacgtgcgcgtattgaaaagtcgtacgcgcagcagctcacagaa
tggggaaagcgctggcggcaactcatagaaaaaggccctcagtatggcacgttggagcag
gcgtgctccgctctgtgcacagaggcggagaaggtgagcgagctccacatggaggtgaaa
tcggcgctgatgggagaagactacgagaagctgaagaactggcagagggactcctaccac
aagcagatgatcggcggctacaaggagaccaaagaggccgaagacggcttccgcaaggct
cagaaaccctgggcaaagaaactcaaagagatggagataatgaagaagtcttaccactct
gcctgtaaagaagagaagctggcagccagcagggagaacaacagcaaactggagagcaac
aacaaccccgaagcccaaaagaagctccaggaaaaggtggagaagtgtcagcaggaggcg
cagaagactaaagagcgctatcagaaatccctggaggaactggacaagctgacccctcag
tacatggagaacatggagcaggtgtttgagcagtggcagcagtttgaagacaaacgcatc
tgcttcttccgagagctgctgctggaggtcaaacagcacctggatctctcatccaatcac
agattccagacaatctaccacacgctggaagacacagtctccgctactgatgtggaagac
gacttgaaatggttccggtccaatcacggccccggcatgccaatgaactggccccagttt
gaggactggtccatagacctgaaccgaaccctcagcagacgagaaaagaaaaagccctcg
gagggcgtcacactgacgggcatcagtcaaactgggtcagaccagcctgtccagcctgcc
aagaccagcaacagcctgactgtgcccactaacgcagcgccagtgggcgcaaaccctttt
gatgaagatgaggtggaggatgagaaggaggaggaggaggagacggccgtggagcagcag
accacagtcaaccacatcagtgtgaataaagaggagataaaaactgcgagcagtacggag
aagactccggactggtcagatgaggacacgggtgctaaccccttctccaccaacggcgac
gggaatccattcgaagacgagccggctgctccggtcgtatcggtggccgtgaaggcgctc
tacgactacgaagggcaggagcaggatgagctgaccttcaaagcaggggaagaattaacc
aaaattggagaagaagatgatcagggttggtgcagaggccggcttaaggatggaaaaaca
ggcctctatccagccaactacgtggaagacatccagtaa
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