KEGG   Cyclopterus lumpus (lumpfish): 117727002
Entry
117727002         CDS       T09199                                 
Symbol
arf6a
Name
(RefSeq) ADP-ribosylation factor 6a
  KO
K07941  ADP-ribosylation factor 6
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04144  Endocytosis
clum05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117727002 (arf6a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117727002 (arf6a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117727002 (arf6a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117727002 (arf6a)
   04031 GTP-binding proteins [BR:clum04031]
    117727002 (arf6a)
Membrane trafficking [BR:clum04131]
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    117727002 (arf6a)
  Arf GTPases and associated proteins
   Arf GTPases
    117727002 (arf6a)
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117727002 (arf6a)
  Exosomal proteins of colorectal cancer cells
   117727002 (arf6a)
GTP-binding proteins [BR:clum04031]
 Small (monomeric) G-proteins
  Arf/Sar Family
   Arf [OT]
    117727002 (arf6a)
SSDB
Motif
Pfam: Arf Roc G-alpha Ras SRPRB Gtr1_RagA MMR_HSR1 GTP_EFTU 6PF2K CRISPR_Cas2 SpoOE-like
Other DBs
NCBI-GeneID: 117727002
NCBI-ProteinID: XP_034382827
LinkDB
Position
24:complement(4824954..4826597)
AA seq 175 aa
MGKMISKIFGNKEMRILMLGLDAAGKTTVLYKLKLGQSVTTIPTVGFNVETVTYKNVKFN
VWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEAKQELHRIINDREMRDAIILIF
ANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATTGDGLYEGLTWLTSNYKS
NT seq 528 nt   +upstreamnt  +downstreamnt
atgggcaaaatgatctcaaagatcttcggcaacaaggagatgagaatattgatgcttgga
cttgacgccgccggtaaaaccaccgtcctgtacaagctgaaactgggacagtcggtcacc
accatccccaccgtgggcttcaacgtggagaccgtcacctacaagaatgtgaagttcaac
gtgtgggacgtcggcgggcaggacaagatccgacccctctggagacattactacacgggc
acccagggcctcattttcgtggtggactgcgcggacagggacaggatcgacgaggcgaag
caggagctccaccggatcatcaacgaccgggagatgagggacgccatcatcctgatcttc
gccaacaaacaagacctccccgatgccatgaaaccccacgagatccaggagaagctgggc
ctgacccggatccgagataggaattggtacgttcagccctcgtgtgcgaccacaggggat
ggactatacgagggcctgacctggctcacctcaaattacaaatcttaa

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