Cyclopterus lumpus (lumpfish): 117727015
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Entry
117727015 CDS
T09199
Symbol
sv2ba
Name
(RefSeq) synaptic vesicle glycoprotein 2Ba
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117727015 (sv2ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117727015 (sv2ba)
Transporters [BR:
clum02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
117727015 (sv2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LD_SV2
Sugar_tr
MFS_1
Pentapeptide_4
Pentapeptide_3
Beta_helix
DUF6117
Motif
Other DBs
NCBI-GeneID:
117727015
NCBI-ProteinID:
XP_034382859
Ensembl:
ENSCLMG00005019819
LinkDB
All DBs
Position
3:7539271..7549712
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AA seq
693 aa
AA seq
DB search
MDDPYHNNVSQQVTEGGEYTYTQDGSGQDGYPYQADYPPQDEDARSDATEGADDDEQMYE
GEYQGVPHPDEIKEARRAARTEARRKARQAAQQEEEEDNLPEQYETIMEDCGHGRFQWML
FFVLGLALMADGVDGFVVGFVLPSAEKDMCISNSDKGLLGLLVYVAMMVGALVWGGLCDK
MGRRKCLIYVLTIDLVFSFLSCFAQSYGFFLFFRFCSGFGIGGSIPIVYTYYTEFLQMDK
RGEHLSWLCMFWMLGGLYASFTAWGIIPHYGWGFAIGSEFQIHSWRLFILVCLFPALAAL
VGVVFMPESPRFLLESARHDEAWMILRRVHDTNWKAKGEPERVFTATNIKTPQTQEDDFI
EIQSDTGTAFQRWTVRHTTMLQQVMSNIMSLSAPELRLQGLFLVIVWFCLAFSYHGLGVW
FPDMIKYMQYEEYESKVKVFHRERVEHFHFNFSLVNQIHREGEYIHDKFENIEIKSVKFE
DSLFENCYFEDVRSTNTFFENCTIKNTVFYNTDLWHEKFKDCRMENTTFLHPKKGCHLNF
LEENDIVIYMVSFLGSLAVLPGNIISALFMDKIGRIKIIGGSMLASSACTFLLLLSFSQG
AVICWQCLFYATSVAAWNGLEVISVELYPSSKRGTAFGVLNGICKFAAILASSIFAAFIG
ITKIVPIFLAFIALVCGGLVALKLPETREKVLS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggatgacccctaccacaacaacgtgagccagcaggtgacagaaggtggggaatacacc
tacacccaggatgggagcggtcaagatggctacccctaccaggccgattaccctccgcag
gacgaagacgctcgcagcgacgccacggagggcgcggacgacgatgagcagatgtacgag
ggggagtaccaaggcgtcccccaccccgacgagatcaaggaggcacggcgggcggctcgg
acggaggccaggaggaaagcccgtcaggccgcccagcaggaagaggaggaggacaacctg
ccagagcagtacgagaccatcatggaggactgcggccacgggcgcttccagtggatgctg
ttcttcgtgctgggcttggcgctgatggccgacggagtggacggcttcgtggtgggcttc
gtactgcccagtgctgagaaggacatgtgcatatccaactccgacaaaggactgctgggt
ctgctggtgtacgtggccatgatggtgggggcgctggtgtggggcggtctgtgtgacaag
atggggcggaggaagtgtctgatctacgtcctgaccatcgacctggtcttctccttcctg
tcctgcttcgctcagagctacggcttcttcctcttcttccggttctgctccggcttcgga
atcggcggctccatcccgatagtgtacacctactacaccgagttcctgcagatggacaaa
cgcggggagcatctcagctggctctgcatgttctggatgctgggaggcctgtacgcctcc
ttcaccgcctggggaatcatccctcactatggctggggcttcgccatcggctccgagttc
cagatccacagttggaggttgttcatcctggtgtgcctcttccctgccctggctgcactc
gtcggggtcgtcttcatgccggagagcccccgtttcctcctggagagtgcccgacatgat
gaggcgtggatgatcctgcgacgagttcacgacaccaactggaaggccaagggggagccg
gagagagtgttcactgcgaccaacattaagacaccccagacccaggaggacgatttcata
gagatccagagtgacaccgggacggccttccagcgctggaccgtcagacacacgaccatg
ctgcagcaggtgatgtctaacatcatgtccctatcagccccagagctcagactgcaaggc
ctcttcctggttattgtctggttctgcttggctttcagctaccacgggctgggagtgtgg
tttccggacatgatcaaatacatgcagtatgaggagtacgagtccaaggtcaaagtgttc
caccgagaacgggtcgagcacttccacttcaacttctctctggtcaaccagatccaccgc
gagggagagtacatccatgacaagtttgaaaacattgagataaagtctgtcaaattcgag
gattctctgtttgaaaactgctactttgaggacgtcaggtcaaccaacaccttctttgag
aattgcaccatcaagaacactgtcttctataacacagacctctggcacgagaagttcaaa
gactgtcgaatggagaacaccaccttcctccacccgaaaaagggctgccatctgaacttc
ctggaggagaacgacatcgtcatctacatggtcagcttcctgggcagtttggctgtgttg
cctggcaacatcatctccgcactgttcatggacaagataggaagaatcaagataataggt
ggttctatgttggcgtcgtctgcctgcactttcctgttgctgcttagtttcagtcaagga
gctgtgatatgttggcagtgtctcttctatgccaccagcgtggcggcctggaatggatta
gaggtcatttctgtggaactctacccctcctctaaaagaggtacagcgtttggtgtcctg
aatggaatctgtaagttcgccgcaatccttgccagctccatctttgcagccttcatcggc
atcactaagatcgtccccatcttcctggccttcatcgccctcgtctgcggaggtctggta
gctctcaagctgcccgaaacccgggagaaagtcctctcctga
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