Cyclopterus lumpus (lumpfish): 117727017
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Entry
117727017 CDS
T09199
Symbol
ppp2r5cb
Name
(RefSeq) protein phosphatase 2, regulatory subunit B', gamma b isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03015
mRNA surveillance pathway
clum04110
Cell cycle
clum04114
Oocyte meiosis
clum04261
Adrenergic signaling in cardiomyocytes
clum04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117727017 (ppp2r5cb)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117727017 (ppp2r5cb)
04114 Oocyte meiosis
117727017 (ppp2r5cb)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117727017 (ppp2r5cb)
09158 Development and regeneration
04382 Cornified envelope formation
117727017 (ppp2r5cb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117727017 (ppp2r5cb)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117727017 (ppp2r5cb)
03036 Chromosome and associated proteins [BR:
clum03036
]
117727017 (ppp2r5cb)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117727017 (ppp2r5cb)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117727017 (ppp2r5cb)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117727017 (ppp2r5cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
117727017
NCBI-ProteinID:
XP_034382855
Ensembl:
ENSCLMG00005018387
UniProt:
A0A8C3AN12
LinkDB
All DBs
Position
24:5134218..5154354
Genome browser
AA seq
578 aa
AA seq
DB search
MPNKTKKDKESQKSGKVGKSGGQENSEHEQSSNRKASNNVPPTTQLLKGKQPGSQTPVKK
DKRQSSSRFSLSNNRELQKLPAFKDVPPAEQEKLFMQKLRQCCVLFDFLSDPLSDLKWKE
VKRAAISEMVEYITHNRNVITEPIYPEVVHMFSVNMFRTLPPSSNPTGAEFDPEEDEPTL
EAAWPHLQLVYEFFLRFLESPDFQPNVAKKYIDQKFVMQLLDLFDSEDPRERDFLKTTLH
RIYGKFLGLRAYIRKHINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFL
LKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPTVMALLKYWPKTHSPKEVMFLNE
LEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKIL
PIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKSKEKAKWKERE
EAWLKIENLAKSNPQFLVYVDSICSGCPMDMETDGPLLDDVNALKKAVVEEATQVQKDQR
RERPLMRRKSELPRDICTVNALELHRRADEIMTTHDGH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacaaaacgaagaaagacaaggagtcccagaagtctggtaaagtgggcaagagt
ggaggacaagagaattcagagcatgagcagagctctaacaggaaggccagcaataatgtt
cctcccaccactcagctgctaaaggggaagcagccaggttcccagacacctgtcaaaaag
gacaagaggcagagctcctctcgtttcagcttgagcaacaacagggagctgcagaaactg
cctgctttcaaagatgttccccccgcggagcaggagaagctgttcatgcagaagctgcgt
cagtgctgcgtcctcttcgatttcctctcggacccgctgagcgacctgaaatggaaggaa
gtgaaacgggcggccataagcgagatggtggagtacatcacccacaacaggaacgtcatc
accgaacccatctacccggaggtggttcacatgttttctgtgaatatgttcaggacgttg
ccgccatcatccaaccccacgggcgccgagtttgacccggaggaagatgagcccacgctc
gaggctgcgtggcctcatctacagctcgtctatgaattcttcctgcggttcttggagtca
cctgactttcaaccaaacgtagccaaaaagtatattgaccagaagtttgtaatgcagctc
ttagacctgtttgacagtgaagaccccagagaaagagattttttaaagaccactcttcat
cgcatctatggcaagttcctgggcctgcgagcgtacattaggaaacacattaataacata
ttttataggttcatttatgagactgaacatcataatggaatagcagaattactggaaata
ttaggcagcataatcaatgggttcgcgttaccgctgaaagaagagcataagatattcctg
ctgaaggttctgctgcctttgcacaaagtcaagtctcttagtgtatatcacccacagctg
gcttactgtgtggtccagttcttagagaaggatagcaccctcacagaaccgacggtcatg
gctttgttaaagtattggcccaagacccacagtccaaaagaggtgatgttcctcaatgag
ctggaggagatcctggacgtcattgagccttcagagtttgtcaaagtcatggagcctctc
ttcaggcagttggccaagtgtgtgtccagcccgcacttccaggtggcagagcgagcgctg
tactactggaacaacgagtacatcatgagcctaatcagtgacaacgccgccaagatcctg
cccatcatgttcccatccctctaccgcaactccaagacccactggaacaagacgatccac
ggcttgatctacaatgcgctgaaactcttcatggagatgaaccagaagctgtttgatgac
tgcacgcagcagttcagggcagagaagagcaaagagaaagccaaatggaaagagagagaa
gaggcgtggctgaagattgagaatcttgcaaaatcaaacccacagttcctggtctacgtc
gactcgatatgctcgggttgtccgatggacatggagacggacgggccgctgctagacgac
gtcaacgcgctgaagaaggccgtcgtggaggaagccacacaggtccaaaaggatcagcgc
cgagagcgcccgttgatgaggaggaaatcggagctccccagggacatctgcacggtcaac
gccttggagctgcaccggagagccgacgaaataatgacgacgcatgacggccactaa
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