Cyclopterus lumpus (lumpfish): 117727036
Help
Entry
117727036 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: beta/gamma crystallin domain-containing protein 1-like
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117727036
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117727036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
Ricin_B_lectin
RicinB_lectin_2
PTCRA
Motif
Other DBs
NCBI-GeneID:
117727036
NCBI-ProteinID:
XP_034382893
LinkDB
All DBs
Position
24:12356505..12380682
Genome browser
AA seq
2390 aa
AA seq
DB search
MSESPEEQESTGVLGRIGSWLSPWRGKGPKSPTENASPTSDQALKSEGEQESEESVRLRA
RTQEGEEEKDQSSNPNPFGLSRDIFPCEEEDATQSAHRGVSVVSSTGTAEGGPKKEEFVD
CRKKRVGQAKEREESSNGNLASGNPETNASQLTHLSHFSEQGVVWESDQAHTQPQAQRQV
QAGRRLNVYLEETSVIHFDQNTCAGQEVIQVTKKNLRVLAKVKSSPDFDLSSSSTNAENK
RTNVSPAVGAHTYYSALVGVSLTSHKESQSEPEPEGQTEAHSMGRKNAARRKLRKNSMGD
EGNGPQEKMPPSAEPVPQVIPPSDNSVTSPQGKSPKTHMGEASVNSSSKHSTTSQTSSEG
AENKTSGPVTDTLLDNFQDSNSDIATPLACAVDVSADMEEDNSVYNKVERKTETPESKRR
SMKVSRSEVKLFTKNVPWNSKQNPAGDTEEFKAVLKNDQDQAKDKPKTEIDVRLHKLKNI
AEEPKPVVGHIADRISLFERPAAGVNKRAFQSPRSADVSPVRKATPMLKPDVXVVRKRSR
SAERSGTARSSSVSPSGKKPMTIKERVRNYTKASDTGGGPTQPQKPDMTGMSQKATSCIV
SASKSLELDNQGKLDNEKQIQQAKSEITLKLDGQDTAGVGLKISIPKEPTTDSNTNHTVA
SKTADQVMEPARVETNVPAKGLGCVELTNSISPQSKDLSRTGSRSKRRKGREPTSPISPN
SEFKLDCSTSKPEFTAIKQQQVDESASKLLTEKVSLPSDKAQGNTDTRQKAFKKGPEVLG
KQKKMLDSSFKEENIDKPVKRQEGMPEPSVSKDEPDTAAYSSGTKTPIDKDPVILPQKDK
KAGGHGLVLGENASKDSRETSASSPSPVLERPIEKPGLMEQEPPVEQPKIGKELSVQSES
TEPNKNNTGQTPKCPDKDIELMNQAESKDVGKLENVEGVKTNPTDKKNKDKAQQLLHSSK
NITKAEISESRQGTARDDERKDAIRKDETQPAKVITKPEIIQPKPASASSEKNSTSSDLP
AQKQGVRHTKIPHTEKAAVCSVTQTNEAVSVTETAKGPSKGEKAATVPSELRTKSIESPG
TEPEPVVVAAKPQPHSESVEKTENSPDDSCANGANDAQFSSSKSITKATTAAEKVSVKAA
DGTPALITAQTDNTSEKESYDKKSLPFSASKSLSSNVARRSDGGTNSTVESVASEVSGDI
TKPAPRARQGEESQNTGSRSDIISLKGAKEIAQSPSDGAASNSTVDVVKKTAEKTFHSLM
NDLSPVANGDISPHSQLHTVEKEPVDNKPSQTQKAPTSPHANKPIPNTTPLSTMKKLHFP
QGRSKDDSATRQDVPSSWLDVDFPKRKLKVSVPKLSSSGSESNLLDTSGELDDNDFIEKI
QKLCAPFSLPPRKHTQLRPPQPPFALPAIREARFEKTFDPEEFKFGLSKKNQFSGDTSPS
LLASKYQNKDTTSVLKPARASLADRSMLLSILDPHSRHRDNSQDEEDVKEERDDHIKVKS
RLEGSCVLNSLNSSIFRGKRNGVQTQVEGTHSGDVSPSEAPQLSPPEGTPPPPPSPTASA
PLKDTRAPSDREEAPAAEAVFSDSGLPLPLFNDIKLPDYLEKYLPREPRKPERSTQGQEQ
VRTEVIGKMKAAACEADLAVKPGREPPDALPPCFPEIPPITHSILLEHKQPPALPQAIRS
NNITAKGFHKRPGKMVLFEKHQFSGQAHEVFRDVADATSLQLSPLISVQVLRGCWVIYEK
PDFQGRSIALEEGGIELSNVWAEPGPEAEPQTNPPPMLIGSIRLAVWDYSLPHIDLFTEP
EGRGRVTPYHDDSIETGSFGIPLSTASIQVHSGVWLVFSDPGFQGMVAVLETGEYPVPDT
WGFTSPFVGSLRPLKMGGFKVENPNEVKALVYEKPGLEGSCWEIDSDIFSFDESEGDMAT
DGENLDSRKLKSVGSLKIIGGLWVGYSEPGFEGQQYILEEGEYLECSDWGGSDQLGSLRP
ILADFISPHLKMFSDKDFGELGVNIDLTVPVIDMDGTGYGVKTQSIDVINGVWVVFEEPG
FCGECYLLEKGLYGSPADWGSPQPRVASAMPVVLDDFENAAKFKVQLFSDPGFQGSVVPL
EEGVASLTDSVSVASCKVLAGSWLAFEGQDFTGRMYVLEVGNYPDLRAMGCLNARSSILS
LQTVGFEFSLPSITLFERCGLWGKRVVLTDGSVNLQLAGGCSRVQSVLVEGGMWVLYEGI
NYRGPQILLRPGEVLDWRKFSSWQKIGSLRPLIQKRVHFRLRNRLTGLMMSVTGDLDDVK
LMRVQETEETDGFEQIWFHENGHVHCKLLEECCLSPSGSVTMAGSRVGLSPKPDNQDQLW
SITPGGFIRYTSTSDLVLDIKGGTHYDKNQVILKRLDPNNQQQQWDVEII
NT seq
7173 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagagccccgaggagcaggagagcactggggtcttgggtcgtatcgggagctgg
ctctctccatggaggggaaagggtccaaaaagtcccactgaaaatgcctccccgactagc
gatcaggctcttaagtcagagggcgaacaggagagtgaagaatctgtgagactccgggca
aggacacaagagggggaggaggagaaggaccagagctccaatcccaatccattcggtctc
tccagagacatttttccttgtgaagaggaggacgccacacagtctgcccacagaggcgtc
tctgttgtgagcagcactggaacagcagaaggaggtccaaagaaggaggagtttgtggat
tgcaggaagaagagagtcgggcaggccaaggagagggaggagagcagcaacggtaattta
gcgagcgggaatcctgagacaaatgccagtcagctgacacatctctctcacttttctgag
cagggtgtggtatgggaatctgaccaggcccacacccagcctcaagcccagagacaagta
caggcaggcaggaggctcaatgtgtacctggaggagaccagcgtgattcactttgaccag
aacacctgtgctggacaggaagtgatccaagtcacaaaaaagaacctcagagtcctcgcc
aaagtaaagtcatcaccagattttgatttgagctcaagttcaacaaatgcagagaacaaa
aggacaaatgtgagtcctgctgttggggcacatacttactacagtgcccttgtgggggtg
tcactgacgtcacacaaagagtcacagtcagagcctgaacctgaaggacaaacagaggct
cacagcatggggcgtaaaaacgcagccagaaggaaattgaggaagaactctatgggagat
gaagggaacggcccccaggaaaaaatgcctcccagcgccgaacctgtcccacaagtaatc
cctccatcagataactcagtgaccagtcctcagggcaaaagtccaaagactcacatggga
gaggcatctgtaaactcctcctccaagcacagtaccacctctcagacttcatctgaagga
gcagagaataagacttccgggcctgttacagacacgctgttggacaatttccaggactca
aactcagacattgcaacccctctggcatgtgcggttgatgtcagcgcagacatggaggaa
gacaacagtgtttacaacaaagtggaacggaagacagagacaccagagtccaaacgcagg
agtatgaaagtttctcggagtgaggtgaagctttttacaaagaatgtgccttggaattca
aagcagaatccagcgggagacaccgaggaatttaaagcagtgttgaaaaatgaccaagat
caagcaaaggataagcccaaaacagagatcgatgtcagactacacaagctgaagaacatc
gccgaggagcctaagccagtcgttggccacattgcagatagaatcagcctctttgagcgc
ccggcagcgggcgtcaacaagcgggccttccaaagtccgaggagtgctgatgtctctcca
gtcaggaaagccacgccgatgttgaaaccagatgtangagtcgttagaaagaggtcaaga
tcagcagaacgttccggcacagccaggtccagctctgtgtcacccagtgggaagaagccg
atgacgatcaaggagcgagtgaggaactacacaaaggcatctgataccgggggcgggccg
acgcagcctcaaaagccagacatgacaggaatgtctcaaaaagctacctcatgcatagtt
tctgcatccaagtcattagaactagacaatcagggtaaactggataatgaaaagcaaata
cagcaagcaaagtcagagataacattaaaactagatggacaagataccgccggtgtaggg
ttaaagatttccattcctaaagaaccaacaacggactctaacacaaaccacacagtggcc
tcgaaaaccgcagatcaggttatggaacctgccagagttgaaacaaatgttccagctaaa
ggtctgggttgtgtagaactgaccaatagcattagcccacagtccaaagaccttagcaga
acaggctcccgctctaaaagaagaaaaggtagggaaccaaccagtcccatcagcccaaat
agtgaattcaaactggattgctccacaagtaagccagagttcactgctataaaacaacaa
caggtggatgagtctgcctctaaactactcaccgagaaagtctcattaccatctgataaa
gcccaaggaaatacagataccagacagaaagcatttaagaaggggccagaggtcttagga
aaacagaagaaaatgttggattcttcatttaaagaggagaatattgacaaaccggtaaag
aggcaggagggaatgcctgaaccatctgtcagcaaagatgaacctgatactgctgcttat
agcagtggaactaagacacctattgacaaggatcccgttattttaccccagaaggataaa
aaggcagggggacatggcctcgtattgggagaaaatgcctccaaggacagtagagaaact
tcagcctcctccccctcaccggtgcttgaacgacctattgagaagcctggtttgatggag
caagagccacctgttgaacaaccgaaaataggaaaagaattgtcagtgcaatctgaatcc
accgagccaaataaaaacaacacagggcaaacaccgaaatgcccggacaaggacatagaa
ctaatgaatcaggctgagagtaaagatgtggggaaattggaaaatgtggagggcgtaaaa
accaatccgactgataaaaagaacaaagacaaagcacagcaactcctgcattcatctaaa
aacatcacaaaggccgagatttcagaaagcagacaaggtactgcgagggatgatgaaaga
aaagatgcgataagaaaagatgagacacagccggctaaagtcataacaaaacctgaaata
atacaaccaaaaccagcctctgcatcctcagaaaagaacagcacatcatcggacctgcct
gctcaaaaacaaggtgtcagacacacaaagattccacatacagaaaaagctgctgtttgt
agcgtcactcaaactaatgaggctgtgagtgtgaccgagactgcaaaagggccgtcaaaa
ggagaaaaggcagcaactgtgccctctgagttgcgaacaaagtctatagaaagccctgga
acagagccagagccagtggtggttgcagcaaaaccgcagcctcattctgaatccgtggaa
aaaacagagaattcaccagatgactcatgtgcaaatggagctaatgatgctcagttctcc
agctcaaagtcaataactaaagcaactacagcagctgagaaagtgagtgtaaaagccgct
gacggcactccggcgctgataactgcacagactgataatacgtcggagaaggaatcgtac
gataaaaagtctttgcctttttcggcctcgaaatctttgagcagcaatgtagcaaggcgg
agtgatgggggaacaaattcaactgtggaatcagtggcctcagaagtctcaggagatata
acgaaaccagctcctagagcccgacagggtgaggaatcacaaaatacaggaagtagaagt
gatatcatttcactcaagggtgcaaaggaaatagcacagagcccctctgatggtgctgct
tccaactccacagttgatgttgtaaagaagacggctgagaaaacattccattcactaatg
aacgatctctcccctgttgccaatggtgatatctccccacattcacaactccacacggtc
gaaaaggaaccggtcgacaacaaaccaagtcaaactcaaaaagcgcccacttccccacat
gctaataagccgatcccaaacacaaccccgctttcaaccatgaagaagttacattttcct
cagggacgaagcaaagacgattctgcaacgcggcaagacgttccctcgagctggctggat
gtggacttccccaaacggaagctcaaagtctcggtgcccaaactgagctcctctggaagt
gagagcaatcttctggacacttctggggagctagatgataatgatttcattgagaagatc
cagaagctttgtgcaccgttctccctcccgccacgtaaacacacccaactccggccccct
cagccaccatttgccctgcctgccatcagagaggcacgctttgagaagacgtttgacccc
gaggagtttaagtttggcttgagtaagaagaatcagttcagtggagacacaagcccgagc
ctcttggcctctaagtaccagaacaaggacacaacatctgtcctgaagcctgccagggct
agtttggcagacaggagcatgctgctcagtatactggaccctcactctcgccacagggac
aacagtcaagacgaggaggatgtcaaagaagagagagatgaccatatcaaggtgaagtct
cgcttggaggggagctgtgtcctcaacagcctcaactcctccatcttcagagggaagagg
aatggagttcaaacgcaggtagagggcacccactccggggatgtgtcaccgagcgaagcc
ccccagctaagccctccagagggcaccccgccgcccccgccaagcccaactgcctcagct
ccactcaaagacacacgagccccgagcgacagagaggaagccccggctgcagaggctgtg
ttcagtgactcaggccttccacttcccctctttaacgacatcaagctgccggactatttg
gagaagtacctcccccgagagccacggaaaccagagcgcagcacacaaggacaggagcaa
gtcagaactgaggttattggaaagatgaaagctgcagcctgcgaagcagacctggctgtg
aaaccaggtcgagagcctcctgatgctctgcctccatgttttcctgagattcctcctatt
acacattctatactccttgagcataagcagccaccggctctgccacaggcaatacgaagt
aataacataactgccaaaggatttcacaagcggcctggaaagatggtgttgtttgaaaaa
catcagttcagtggccaggcgcatgaggttttcagggatgtcgcagatgctacttctctg
cagctctcgcctctcatatctgttcaggttcttcgaggatgctgggtaatctatgagaag
cctgacttccagggacgctcaatcgccttggaggagggaggcattgaattgtcaaatgtg
tgggcagagccagggccggaggcagaaccacagaccaacccaccaccaatgctgattggc
tcaatacgacttgctgtctgggattacagcctcccccacattgatctgtttactgaaccg
gagggccgcggcagagtaacaccgtaccatgatgacagcatagagacaggctcatttggc
atcccactgagcacagcttccatccaagtgcactcgggggtgtggctggtgtttagtgac
ccggggttccaaggcatggtagcggttctggagacgggagagtaccctgttcctgacacc
tggggcttcacatcaccctttgttgggtctcttagaccacttaaaatgggtggtttcaaa
gtggagaaccctaatgaagtcaaggccttggtgtatgagaagcctggccttgagggctcc
tgttgggaaattgacagtgacattttcagttttgatgaaagtgaaggagacatggctact
gatggagaaaacttggactcgagaaaactgaagtctgttggttctttaaagatcattgga
ggactctgggtcggctacagcgagcctgggtttgagggccagcagtacatcctggaggaa
ggagagtacctggaatgcagcgactggggaggctcagaccagctcgggtcactgcgacca
atcctggctgactttatttctccacacctcaaaatgtttagcgacaaagatttcggtgaa
ctgggagtcaacattgacctcacggtgcccgttattgacatggatggcacaggctatggc
gtgaagacgcagtcaatcgatgtcatcaatggcgtctgggttgtgtttgaggagccgggc
ttttgtggtgaatgctacctcctggagaaaggcctgtatggaagcccagcggactggggg
tcgccacagcccagagtggcctcagcaatgcctgttgtgttggatgattttgagaatgca
gccaaatttaaggtgcagcttttctcggatccaggttttcaaggctctgttgtccctctg
gaggagggtgtggcctccctgacggacagcgtctctgtggcctcgtgcaaggttctggct
ggaagctggctggcatttgagggccaggacttcactggcaggatgtacgtgttagaagtg
gggaactacccagacctgagagcaatgggctgtctcaatgcgagatcctccatcctgtcg
ctacagactgttggctttgagttttcactgccatccatcactctgtttgagcggtgtggt
ctgtggggtaagagggtggtgctcacggatggatcagtcaaccttcagctggctggaggc
tgcagcagagtccaatctgtgctagtggaaggaggcatgtgggttttatacgagggaatc
aactatcggggtcctcagattttgctgagacccggggaagtgcttgactggcgcaagttc
agcagttggcagaaaattggatcccttcgccctctcatacagaagcgagtgcacttccgt
ttaaggaacagactgacggggctcatgatgtcagtgaccggcgatctggatgatgtcaaa
ctgatgcgggtccaagaaacagaggagacggatggatttgaacagatctggttccacgaa
aatggacatgtgcattgcaagctgctggaggagtgctgcctgagtcccagtggtagcgtg
acgatggcaggaagccgcgtcggtctctccccgaagccagacaaccaggaccaactctgg
agcatcacccctgggggattcatccgctacacctccacttcggatctggtcctggacatc
aaagggggcactcactacgacaaaaaccaagtgattctaaaaagacttgatccaaataac
cagcaacaacagtgggatgtggagattatatga
DBGET
integrated database retrieval system
