Cyclopterus lumpus (lumpfish): 117727044
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Entry
117727044 CDS
T09199
Name
(RefSeq) syntaxin-11-like
KO
K08487
syntaxin 11
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117727044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117727044
Membrane trafficking [BR:
clum04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117727044
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Paralog
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GFIT
Motif
Pfam:
Syntaxin
SNARE
DUF6099
Myb_DNA-bind_3
Motif
Other DBs
NCBI-GeneID:
117727044
NCBI-ProteinID:
XP_034382915
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Position
24:complement(11035603..11037390)
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AA seq
297 aa
AA seq
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MRDMLERLQTISEEQEDYEPELYGPEYDADKVTLSQQAVVFENSSTIDNILREAHSIRKE
ISLLHLEVERLAINNERFGTSMRRLTLLKKDSDSIARGIQQHGGALYVRLQALGRESRQL
EEKEGLNSAVSRIARTQHDTLSRSFQAAMSDYNEAEELQRDACRQRIQRQASILGNEITD
DQLDVMVDKGGEGWAELSQSLQTEGARSSRWAMCEIKGRHKELVELEVRLKEVHELFLDM
AVLVEEQGFMLNNIEANVCGTEEYTEKINVYINRALKYKKKNPFQQCCACLPCWKQD
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacatgctggagaggctgcagaccattagtgaggagcaagaggactacgagcca
gagttgtatggacccgagtatgacgcagacaaggtgactttgtctcaacaggcggtggtg
tttgagaactcctccactattgacaacatcctgagggaggcccactccatacgcaaggag
atctccttgctccacctagaggtggagcgtctggcgataaataacgaacgctttggcacc
tctatgcgccgtctcaccctcctcaaaaaggactctgactcgattgccaggggcatccag
caacatgggggggctctgtacgtccgcctgcaggccctgggtagggagagcaggcagctc
gaggaaaaagaaggtctcaactctgctgttagtcgcattgcccgaactcagcatgacacg
ctgtcccgttccttccaagctgccatgagtgactacaatgaggcagaggagctgcagagg
gatgcgtgccggcagaggatccagaggcaggcctccatactggggaatgaaatcacagat
gaccagctggatgtgatggttgacaaaggtggtgagggatgggcagagctgtcccagagc
ctgcagaccgaaggtgctcgctcgtcccgctgggcaatgtgcgagatcaaaggcagacac
aaggagctggtggagctggaggtccggctgaaggaggtccatgaactattcctggacatg
gccgtgctggtggaggagcagggattcatgcttaataatatcgaggctaatgtgtgtggc
acagaggaatacacagagaaaattaatgtttacatcaacagggccctgaagtacaaaaag
aagaatccttttcaacaatgttgtgcctgtctaccctgttggaaacaagactga
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