Cyclopterus lumpus (lumpfish): 117727050
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Entry
117727050 CDS
T09199
Symbol
capn3b
Name
(RefSeq) LOW QUALITY PROTEIN: calpain-3b
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117727050 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117727050 (capn3b)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
117727050 (capn3b)
Peptidases and inhibitors [BR:
clum01002
]
Cysteine peptidases
Family C2: calpain family
117727050 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
117727050
NCBI-ProteinID:
XP_034382936
Ensembl:
ENSCLMG00005015033
LinkDB
All DBs
Position
24:complement(9510487..9524515)
Genome browser
AA seq
769 aa
AA seq
DB search
MGDKKRKVPIVEDTKVRVLYETEASFEPDDKADYPSAGTNSIYSAILSRNEAVKDATRLK
TFLELRDKYAKKKVVFEDPLFPANDSSLFYSHKPSMKFEWKRPSEICENPQFIIDGASRT
DICQGELGDCWLLAAIACLTVNEKLLYRVIPPDQSFTDNYAGIFHFQFWRYGEWIDVVVD
DRIPTCNNHLVFTKSFRKNEFWSALLEKAYAKLHGSMRPLKGGNTLEAMEDFTGGVTEFF
ELSESLKELFSIMRKALERGSLMGCSIDISSATELETRTDQGLVRGHAYSIIGLAECDEV
AKDTRIRLIRLRNPWGWVLWKGPWSANSEEWSTISTADKNNLKKQTVEASEFWMSFDDFK
RNFTKLELCNLTPDTLQGDERHSWTVSVNEGRWVRGSSAGGCRNSPQTFWTNPQYRLQLF
EEDDDPEDGQAACTVVVALMQKGRRMQRHQGAKFLTIGFSIYEVPKEMCGQNQHLQKDFF
LYTASKAKCKTYINLREVTERMHLPPGEYVIIPTTFEPHQDGEFILRVFSEKKSTSEEAE
DTIGSDKTQQDEKKKEKPIVFVSDRARANKEIEHDGIQGEKKKKPKRKLLQPEEETEEEK
QFRAIYQQIAGEDMQICANELKMVMRNVLAKHNEIKTEGFSLETCRSMIALMDTDGTGKL
NLQEFKHLWKKIKEWQMIFKRYDKDKSGSISSFEMRNAVNDAGFHLNKQLYDIIAMRYAD
EHLNIDFDSYICCFVRLEGMFSNFXCFDKDGDGIIKLNVLEWLQLTMYS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaagaaacgtaaagtgcctattgttgaagatacaaaggtgagagtactttat
gaaactgaagcatcattcgagcccgatgacaaagctgattacccttctgctggtactaac
tccatctactcagccattctcagcagaaacgaggctgtcaaggatgccacgcgtctcaag
acttttttggaactgcgagacaaatacgcgaagaagaaggtggtgtttgaagaccccctg
ttccctgcaaatgactcatcgctcttctacagccacaaaccttccatgaagttcgagtgg
aaacgtccctcggaaatttgtgaaaacccccagttcatcatagacggagccagcaggaca
gacatctgtcaaggagaattgggtgactgctggctgctcgctgccattgcctgtttaaca
gtgaacgagaagctgctgtacagagtgattcccccggaccagagcttcaccgacaactac
gccggcatcttccacttccagttctggcgttacggcgaatggatcgatgtggtcgtggac
gaccgcatccccacctgcaacaaccatctagtgttcaccaaatctttcagaaagaacgag
ttctggagcgctcttttggaaaaagcgtatgccaagttgcacgggtccatgaggccctta
aaggggggcaacactttggaagccatggaggatttcacaggaggagttactgagttcttt
gagttgtcagagtcgctcaaagagctcttcagcatcatgaggaaggcactggagagaggc
tcgctgatgggctgctccatcgatatttcttcagccactgaactggagactcggactgat
caggggctggtcaggggtcatgcctactccatcataggcctggcggagtgtgacgaggtt
gcgaaggacaccagaatccgactgattcgattgcgcaacccctggggttgggttctgtgg
aagggaccatggagtgcaaactcagaggaatggtcgaccatttccacagcagacaagaac
aacttaaaaaaacagactgtagaggcgagtgagttctggatgtcttttgatgatttcaag
aggaacttcaccaagctggagctgtgtaacttgacccctgacaccctgcagggggatgaa
aggcacagctggaccgtgtcagtcaatgagggtcggtgggtgagaggcagctctgctggc
ggctgcaggaactccccacaaacattctggacgaaccctcagtatcggctgcaactgttc
gaggaggatgacgacccagaggacgggcaggcggcctgtacggttgtcgtggctctgatg
cagaaaggccgacggatgcagcggcatcaaggggcgaagttcctcaccatcggattttca
atctatgaggtgccgaaggagatgtgtggacagaatcaacacctgcagaaggacttcttc
ttgtacacagcctccaaagctaaatgcaagacctacattaacctgcgggaagtgacagag
cgtatgcatctgcctccaggagagtatgtcataatccccacgacctttgaaccccatcaa
gacggagagttcattctgagggtgttctctgagaagaagagcacgtcagaggaagcggag
gacaccatcgggtctgacaaaacgcagcaagacgagaaaaagaaagagaagccgattgta
tttgtgtcagacagagcacgagccaacaaagaaattgagcacgatggcattcagggggaa
aagaagaagaagccaaagcgaaaactactccaaccagaggaggagactgaagaggaaaaa
caattcagagccatttaccaacagattgctggtgaggacatgcaaatctgtgccaacgaa
cttaagatggtcatgaggaacgtactcgccaaacataatgaaataaagactgagggtttc
agcctcgagacatgtcgcagtatgatcgcactgatggatactgatgggacgggaaagcta
aacctgcaggagttcaaacacctgtggaaaaagatcaaggagtggcagatgatcttcaaa
cgatacgataaagacaaatccggctccatcagtagttttgagatgaggaacgctgttaat
gatgcagggtttcacctcaacaaacagctgtatgacatcatcgccatgcgctacgcagac
gaacacctcaacatcgactttgacagttacatctgctgttttgtgagactggagggcatg
ttcagtaacttttaatgctttgacaaagatggagatggaataataaagctaaatgtcctg
gagtggcttcagctgacgatgtattcttaa
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