KEGG   Cyclopterus lumpus (lumpfish): 117727050
Entry
117727050         CDS       T09199                                 
Symbol
capn3b
Name
(RefSeq) LOW QUALITY PROTEIN: calpain-3b
  KO
K08573  calpain-3 [EC:3.4.22.54]
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117727050 (capn3b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:clum01002]
    117727050 (capn3b)
Enzymes [BR:clum01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.54  calpain-3
     117727050 (capn3b)
Peptidases and inhibitors [BR:clum01002]
 Cysteine peptidases
  Family C2: calpain family
   117727050 (capn3b)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III Calpain_u2 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 117727050
NCBI-ProteinID: XP_034382936
Ensembl: ENSCLMG00005015033
LinkDB
Position
24:complement(9510487..9524515)
AA seq 769 aa
MGDKKRKVPIVEDTKVRVLYETEASFEPDDKADYPSAGTNSIYSAILSRNEAVKDATRLK
TFLELRDKYAKKKVVFEDPLFPANDSSLFYSHKPSMKFEWKRPSEICENPQFIIDGASRT
DICQGELGDCWLLAAIACLTVNEKLLYRVIPPDQSFTDNYAGIFHFQFWRYGEWIDVVVD
DRIPTCNNHLVFTKSFRKNEFWSALLEKAYAKLHGSMRPLKGGNTLEAMEDFTGGVTEFF
ELSESLKELFSIMRKALERGSLMGCSIDISSATELETRTDQGLVRGHAYSIIGLAECDEV
AKDTRIRLIRLRNPWGWVLWKGPWSANSEEWSTISTADKNNLKKQTVEASEFWMSFDDFK
RNFTKLELCNLTPDTLQGDERHSWTVSVNEGRWVRGSSAGGCRNSPQTFWTNPQYRLQLF
EEDDDPEDGQAACTVVVALMQKGRRMQRHQGAKFLTIGFSIYEVPKEMCGQNQHLQKDFF
LYTASKAKCKTYINLREVTERMHLPPGEYVIIPTTFEPHQDGEFILRVFSEKKSTSEEAE
DTIGSDKTQQDEKKKEKPIVFVSDRARANKEIEHDGIQGEKKKKPKRKLLQPEEETEEEK
QFRAIYQQIAGEDMQICANELKMVMRNVLAKHNEIKTEGFSLETCRSMIALMDTDGTGKL
NLQEFKHLWKKIKEWQMIFKRYDKDKSGSISSFEMRNAVNDAGFHLNKQLYDIIAMRYAD
EHLNIDFDSYICCFVRLEGMFSNFXCFDKDGDGIIKLNVLEWLQLTMYS
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgggggacaagaaacgtaaagtgcctattgttgaagatacaaaggtgagagtactttat
gaaactgaagcatcattcgagcccgatgacaaagctgattacccttctgctggtactaac
tccatctactcagccattctcagcagaaacgaggctgtcaaggatgccacgcgtctcaag
acttttttggaactgcgagacaaatacgcgaagaagaaggtggtgtttgaagaccccctg
ttccctgcaaatgactcatcgctcttctacagccacaaaccttccatgaagttcgagtgg
aaacgtccctcggaaatttgtgaaaacccccagttcatcatagacggagccagcaggaca
gacatctgtcaaggagaattgggtgactgctggctgctcgctgccattgcctgtttaaca
gtgaacgagaagctgctgtacagagtgattcccccggaccagagcttcaccgacaactac
gccggcatcttccacttccagttctggcgttacggcgaatggatcgatgtggtcgtggac
gaccgcatccccacctgcaacaaccatctagtgttcaccaaatctttcagaaagaacgag
ttctggagcgctcttttggaaaaagcgtatgccaagttgcacgggtccatgaggccctta
aaggggggcaacactttggaagccatggaggatttcacaggaggagttactgagttcttt
gagttgtcagagtcgctcaaagagctcttcagcatcatgaggaaggcactggagagaggc
tcgctgatgggctgctccatcgatatttcttcagccactgaactggagactcggactgat
caggggctggtcaggggtcatgcctactccatcataggcctggcggagtgtgacgaggtt
gcgaaggacaccagaatccgactgattcgattgcgcaacccctggggttgggttctgtgg
aagggaccatggagtgcaaactcagaggaatggtcgaccatttccacagcagacaagaac
aacttaaaaaaacagactgtagaggcgagtgagttctggatgtcttttgatgatttcaag
aggaacttcaccaagctggagctgtgtaacttgacccctgacaccctgcagggggatgaa
aggcacagctggaccgtgtcagtcaatgagggtcggtgggtgagaggcagctctgctggc
ggctgcaggaactccccacaaacattctggacgaaccctcagtatcggctgcaactgttc
gaggaggatgacgacccagaggacgggcaggcggcctgtacggttgtcgtggctctgatg
cagaaaggccgacggatgcagcggcatcaaggggcgaagttcctcaccatcggattttca
atctatgaggtgccgaaggagatgtgtggacagaatcaacacctgcagaaggacttcttc
ttgtacacagcctccaaagctaaatgcaagacctacattaacctgcgggaagtgacagag
cgtatgcatctgcctccaggagagtatgtcataatccccacgacctttgaaccccatcaa
gacggagagttcattctgagggtgttctctgagaagaagagcacgtcagaggaagcggag
gacaccatcgggtctgacaaaacgcagcaagacgagaaaaagaaagagaagccgattgta
tttgtgtcagacagagcacgagccaacaaagaaattgagcacgatggcattcagggggaa
aagaagaagaagccaaagcgaaaactactccaaccagaggaggagactgaagaggaaaaa
caattcagagccatttaccaacagattgctggtgaggacatgcaaatctgtgccaacgaa
cttaagatggtcatgaggaacgtactcgccaaacataatgaaataaagactgagggtttc
agcctcgagacatgtcgcagtatgatcgcactgatggatactgatgggacgggaaagcta
aacctgcaggagttcaaacacctgtggaaaaagatcaaggagtggcagatgatcttcaaa
cgatacgataaagacaaatccggctccatcagtagttttgagatgaggaacgctgttaat
gatgcagggtttcacctcaacaaacagctgtatgacatcatcgccatgcgctacgcagac
gaacacctcaacatcgactttgacagttacatctgctgttttgtgagactggagggcatg
ttcagtaacttttaatgctttgacaaagatggagatggaataataaagctaaatgtcctg
gagtggcttcagctgacgatgtattcttaa

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