Cyclopterus lumpus (lumpfish): 117727064
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Entry
117727064 CDS
T09199
Symbol
vegfab
Name
(RefSeq) vascular endothelial growth factor Ab isoform X1
KO
K05448
vascular endothelial growth factor A
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
clum04370
VEGF signaling pathway
clum04510
Focal adhesion
clum04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117727064 (vegfab)
04370 VEGF signaling pathway
117727064 (vegfab)
04020 Calcium signaling pathway
117727064 (vegfab)
09133 Signaling molecules and interaction
04518 Integrin signaling
117727064 (vegfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117727064 (vegfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117727064 (vegfab)
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117727064 (vegfab)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Growth factors (RTK binding)
117727064 (vegfab)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117727064 (vegfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VEGF_C
PDGF
Motif
Other DBs
NCBI-GeneID:
117727064
NCBI-ProteinID:
XP_034382953
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All DBs
Position
24:6276911..6291673
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AA seq
210 aa
AA seq
DB search
MNIIDSLTLLFLTLSAVKSAHIPKETERGPHDVIPLMEVYNKSLCQPRELLVEILQEYPE
EVEHIFIPSCVVLTRCAGCCNDEMLQCTPTSSYNVTMEIKRIKPQRQQNDIFMSFTEHSA
CECRLKKEAKEQKEKKSRKGQKRKLKKNRDKTIHDAVCEPCCDHCSERRKRLFVQDPATC
RCSCKHTDEYCKERQLELNERTCKCDKPRR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaacattattgacagtttgacactattatttttgacgctgtcagctgtcaagagcgcg
cacataccgaaggaaacagaaagaggtccacatgacgtgatccctttaatggaggtgtac
aacaagagtttgtgtcagcctcgggagctgctggtggagattctgcaggagtatccggag
gaggtggagcacatcttcatcccgtcctgcgtggtgttgacgcgctgcgccggctgctgc
aacgatgagatgctgcagtgcacgccgacatccagctataacgtcacgatggagataaaa
agaataaaaccccaaaggcaacaaaatgatattttcatgagttttacagaacacagcgca
tgtgagtgtaggttaaagaaagaagcaaaagaacagaaagaaaaaaaatcccggaaaggc
caaaagagaaaactaaagaaaaaccgcgacaaaacaattcacgatgctgtttgtgagcca
tgttgcgatcactgctcggagaggagaaagcgcttgttcgtgcaggatccagcaacctgc
cggtgctcctgcaagcacacagatgaatactgtaaagaacgtcagctagagctcaacgag
aggacctgcaaatgtgacaagccaaggagatga
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