Cyclopterus lumpus (lumpfish): 117727079
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Entry
117727079 CDS
T09199
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
117727079 (gpcpd1)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
117727079 (gpcpd1)
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GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
PI-PLC-X
TreTu_C
Motif
Other DBs
NCBI-GeneID:
117727079
NCBI-ProteinID:
XP_034382981
Ensembl:
ENSCLMG00005014970
UniProt:
A0A8C2ZRD6
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All DBs
Position
24:complement(4216335..4228548)
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AA seq
676 aa
AA seq
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METAQVTFAVRGETSPGEVIAVVGSCEALGSWNSQNATILHPDGSDGNTWTTTVFVPKGA
VSMYRYLKGFFLQSKSAGGPCQVIVNMWETHQQPRMMSPTASHQTIDDGQFGIHNGVNCV
DSGWLTCQTEIRLRLHHSKMPPVSITKKKYKRSRFRIKLTLEGFEEEDEDEEEGVHSPLS
LHKETTTLEISMISANGYKSRHSQPECGYALEPSQWTEYSIHSMDPYNLELTFEFFEEDM
SVHVVQGDGHPGYVGTACLLSSSFSESGKDYGVATLPIMGRNSRQTIGKVRVDYLVITPI
QGLQCDMSSSFTKYWKKRRTLNVGHRGAGSTHAAKHQRVRENTIASFKSAANHGAAYVEF
DVHLSKDAVPIVYHDLTCCISTKKKNDKKSLELIEVPVKDLTFDQLQLLKLVHATAIKEY
DDNDLLDEEEEIDEHQPFPSLSQIFQAIPEHVGFNIELKWICQSKDGSWDGNLSSYFNMN
TFLDTILSCILQKGGKRRIVFSCFDPDICTMVRRKQNKYPILFLTQGISEKYSELMDIRC
QTTQIAISFAQSENILGISGHTEELLKNLSYIGDAQSKGLVVFSWGDDNNEHEIRRKLRE
QGIDGLIYDSICEEQGEQNIFQVEEQHTLQEVITDETRKSSSCSCYSYSIPCSMIPCGAS
KDRIGSAESDSGLSSS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgctcaggtgacttttgctgtccgaggcgaaacatccccaggggaggtgatt
gcagttgttggtagctgtgaggccctggggagctggaactctcaaaatgccacaatatta
caccctgatgggagtgatggaaacacatggactacaaccgtctttgtgcctaaaggagct
gtgtccatgtaccgctacctcaaaggattctttctgcagtcaaagagtgcagggggtccc
tgtcaagtgatagtcaatatgtgggagacccatcaacagccccgcatgatgagccccaca
gcgtcacaccaaactattgacgatggacaatttggaattcacaatggggtgaactgtgtt
gactctgggtggctcacatgccagacagagattcgcctgcgtctgcatcattctaagatg
ccgccggtgtccatcaccaagaagaaatacaagaggtctcgcttcagaatcaagctgaca
ttggaaggatttgaggaggaggatgaggatgaggaggaaggtgtgcatagtcctttatct
ttgcacaaggagaccaccacgctggagatcagtatgatcagtgccaacggctacaagtcg
cgccactctcagcccgaatgtggctacgcactggagccctcccagtggaccgagtacagc
atccacagcatggacccctacaacctagagctcacctttgaattctttgaggaggatatg
agtgtacacgtagtccagggggatggtcatccaggttatgtgggcacagcttgcctcctc
tcctcctctttctcggagagcgggaaggactacggagttgccacacttcccatcatgggt
cgaaattcgagacagaccatcgggaaagtcagagtggactacctggtgatcacgcccatc
caggggttgcaatgtgacatgagctcctccttcaccaagtactggaagaaaagaagaact
ctgaatgtgggacacagaggggctggaagcacacatgcagccaagcaccaaagagtcagg
gagaacacaatagcttcattcaaaagcgctgccaaccatggggctgcctacgtagagttt
gatgttcacctctccaaggatgctgtccccattgtttaccacgatctgacatgctgcata
tccacaaagaagaaaaatgacaagaagtctctggagcttattgaggtgccagtcaaagac
ttgacatttgatcagctgcagcttctgaagctggtccacgccactgccattaaagaatac
gatgacaacgatctgctggatgaggaggaggaaatcgacgagcatcagccattcccttct
ctatcgcagatctttcaagccattcctgagcacgtgggcttcaacattgagctcaaatgg
atctgccagtcgaaggacgggtcatgggacggcaacctgtcgtcctacttcaacatgaac
accttcctcgacaccatcctgtcctgcattctgcaaaaaggggggaaaagacgcatcgtc
ttctcctgcttcgatccggatatctgcaccatggtgcgtcgaaagcagaacaagtacccc
atcctcttcctgactcagggaatttccgagaaatattctgaattgatggacatccgctgc
cagaccactcagatcgccataagtttcgcccagagtgagaatattctgggcatcagtggc
cacaccgaggagctgctaaagaacctgtcctacatcggggatgcccagtccaaaggcctg
gtggtgttcagctggggagacgacaacaacgagcacgagatcagaaggaagctgagagag
cagggcatcgacgggctcatctacgatagtatctgtgaggagcaaggagagcaaaacatc
tttcaggtagaggagcagcacacgctgcaggaggtcattaccgatgagacccgtaaaagc
tcctcctgctcctgctactcctactccatcccctgctccatgattccctgtggggcctcc
aaggaccgcatcggcagcgcggagtccgactctggcctcagctcctcgtga
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