KEGG   Cyclopterus lumpus (lumpfish): 117727100
Entry
117727100         CDS       T09199                                 
Symbol
smek1
Name
(RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform X1
  KO
K17491  protein phosphatase 4 regulatory subunit 3
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:clum01009]
    117727100 (smek1)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clum03400]
    117727100 (smek1)
Protein phosphatases and associated proteins [BR:clum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     117727100 (smek1)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     117727100 (smek1)
SSDB
Motif
Pfam: PP4R3 WH1 Ran_BP1 TMEM164 IgD_del_linker
Other DBs
NCBI-GeneID: 117727100
NCBI-ProteinID: XP_034383031
Ensembl: ENSCLMG00005016666
LinkDB
Position
24:11817828..11832662
AA seq 820 aa
MTDTRRRVKVYTLNEDRQWDDRGTGHVSSGYVERLKGTSLLVRAESDGSLLLESKINPNT
AYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQDVVDESEEE
RFDDMSSPGLELPPCELNRLEDLAEMVASSLPSPLRREKLALAVENEGYIRKLLELFRVC
EDLENREGLHHLYEIIKGIFLLNRTALFEVMFSEECIMDVIGCLEFDPALAQPRRHREFL
TETARFKEVIPISDPELRQKIHQTYRVQYIQDMVLPTPSVFEENMLSTLHSFIFFNKVEI
VGMLQDDEKFLTDLFAQLTDEATDDDKRHELVNFLKEFCAFSQTLQPQNRDAFFKTLSNM
GILPALEVILGMDDVQVRGAATDIFSYLVEYNPSMVREFVMQESQQNDDDILLINLIIEH
MICDTDPELGGAVQLMGLLRTLVDPENMLATANKTEKTEFLSFFYKHCMHVLSAPLLANT
TEEKPGKDDFQTSQLLALILELLTFCVEHHTYHIKNYIINKDILRRVLVLTASQHAFLAL
CALRFMRRIIGLKDEFYNRYIMRNFLFEPVIKAFLNNGSRYNLMNSAIIEMFEYVRVEDV
KSLTAHIVENYWKALEDVDYVQTFKGLKLRYEQQRERQDNPKLDSMRSILRNHRFRRDAR
TLEDEEEMWFNTDEDDLEDGEAVVPPSDKMKSEEDLMEPISKFMERKKLKDTDDKDVLGK
SSLSGRQNPSFKLSFSGSTKTSLSSPPSSASLNPGSPGSPGSPGAGARSSPSTTTVTTKG
GLVGLVDYPDDDDDEDEEEEEDGESKEDPLPPTKKSKLSS
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgacggacactcgtcgacgagtcaaagtctataccctcaatgaggacagacagtgggat
gaccgtggaaccggccacgtctcctcgggctatgtggagcgtttgaaaggcacgtctcta
ctggtgcgagcagagagtgatggttctttactgctggagtccaaaatcaatccaaacaca
gcctaccagaagcaacaggatactttgatagtatggtcagaggcagaaaattatgatctg
gcactgagcttccaggagaaggctggctgtgatgaaatctgggagaaaatatgccaggtt
cagggaaaggacccatcagtggacattacccaggatgtggtcgacgagtctgaggaggaa
cgctttgacgacatgtcctcgccaggtctggagttaccgccatgtgaactgaaccgcttg
gaggacctggctgagatggtggcctcctcactcccatcaccactgcggcgtgagaaactg
gcactagccgtggagaacgagggctacattcgcaagctcctggaactgtttcgtgtgtgt
gaggatttggagaacagagagggactgcatcacctgtatgaaatcattaaaggcatcttc
ctgcttaatcgtactgcactctttgaggttatgttctctgaggagtgcatcatggacgtc
attggttgtctggagtttgatccagcacttgcacagccacggcgacatcgggagtttcta
actgagacggcccgctttaaggaggtgatccccatctctgatcctgaactgcgtcagaaa
atacaccagacgtatcgagtgcagtatattcaggacatggtgttgcccacgccctctgtt
tttgaggaaaacatgctgtccaccctgcactcgttcatcttcttcaacaaggtggagatt
gtgggcatgcttcaggatgatgagaagttcctgacagacctctttgcacagctaaccgat
gaggctacagatgatgacaaaagacacgaactggtgaatttcctaaaggaattttgcgca
ttctcacaaacgttacaacctcaaaacagagacgccttcttcaagactttgtcaaacatg
ggaattctacctgcactagaggtcatactgggaatggatgacgttcaggtgcgtggggca
gccacagatattttctcttatctggtggagtacaacccctccatggtacgagagttcgtc
atgcaggagtctcagcagaatgatgatgacatcctgctgatcaacctgatcatagaacac
atgatctgtgatacagacccagagctaggtggagcagtgcagctgatgggtctgctacgg
actctggtggaccctgagaacatgctggctacggcaaataaaacagagaagacagagttc
ctgagcttcttctacaaacactgtatgcacgtcctctcagcgccactgctggccaacaca
acagaggaaaaaccaggcaaagatgattttcaaacatcccagttgctggccttgattttg
gagctgctgacattctgtgttgagcaccacacctatcacataaagaactacatcatcaac
aaggacattctcaggagggtactggtgctcacagcctctcagcacgccttcctggcacta
tgtgccctgcgcttcatgcggaggatcattggtctgaaggatgaattctacaatcgttac
atcatgagaaactttctcttcgagcctgtcatcaaggccttcctcaacaatggctcccgc
tacaatctcatgaactcagccattattgagatgtttgagtatgtccgtgtggaggacgta
aagtctctcacagctcatatagtagagaactactggaaagctctggaagatgttgactac
gtccaaacgttcaagggcctaaagttacggtatgaacagcagcgagagagacaagacaac
cccaaactggatagcatgcgctccatcctgaggaaccaccgcttccgtcgtgatgcacgg
acactggaagatgaagaggagatgtggttcaacacagatgaggatgaccttgaggatggt
gaggcagtggttcctccatctgacaagatgaagagtgaggaagacctcatggaacctata
agcaagttcatggagagaaagaaattgaaagacacagacgacaaagacgtactggggaag
tcgagcttatcaggcaggcagaacccaagcttcaagctctccttctctggctccactaaa
accagcctgtccagccctccatcatctgcctcattgaacccaggttctccaggatcacca
ggttctccaggcgcaggggcccgaagctcaccgtccaccacaactgtaaccacaaaggga
ggtttagtgggactggtcgactatcctgatgatgatgacgacgaggatgaagaagaggag
gaggatggggagagtaaagaggaccctctgccacctacgaagaagtccaaactgagttcc
taa

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