Cyclopterus lumpus (lumpfish): 117727107
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Entry
117727107 CDS
T09199
Symbol
mindy2
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X1
KO
K01309
ubiquitin carboxyl-terminal hydrolase MINDY-1/2 [EC:
3.4.19.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117727107 (mindy2)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117727107 (mindy2)
Ubiquitin system [BR:
clum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
117727107 (mindy2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY_DUB
Phage_ABA_S
Motif
Other DBs
NCBI-GeneID:
117727107
NCBI-ProteinID:
XP_034383050
Ensembl:
ENSCLMG00005021775
LinkDB
All DBs
Position
3:complement(15163841..15183290)
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AA seq
675 aa
AA seq
DB search
MEKNANLHRDTDGSSLCATIAGAMGDVTAVGGGKGTAEKCKNSEAPLSTLVNVSCNNSTT
NVSAPSYVNVIPSAGKSGVSEVMEVLPVQEDKSSDTKTSGSGSGDQISNGMGHDSVLAAG
DNEGGVSKLVNNKPDSPSAHLAKEGARAYAEVLARGESEPTKLVKPTQLCPDKAIKAHFK
PALSGDNTLSEGLPSESDPDPSLGGESRSIDSLESFSNLNSCPSSDLNSEGLEDRGLALA
LQGEHGADGTNTSCAKDRAAGQSIYHIKWIKWREENTPIITQNENGPCPLLAIMNVLLLA
WKVKMPPMMEIITVEQLMEYLGDYILETKPKEISEAQRLNYEQNMSDAMAVLHKLQTGLD
VNVKFTGVQVFEYTPECIVFDLLDIPLYHGWLVDPQMHDIVKAVGNCSYNQLVEKIISCK
QSDNSELAGEGIVAEQFLSSTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMIKYKGQ
LYLLVTDQGFLTEEKVVWESLHNVDGDGNFCDSEFRLRPPSNPETVYRGQQDQIDQDYLM
ALSLQQEQQNQDLQWEQLPEGISDLELAKKLQEEEDRRASQYYQEQEQEQAAAAVVAAAA
AAQQGQQEPAEGDEADRGGAGAGSAGAGSAGAGNAGAGAGTAAAAGATPSPGKQSSSGER
KAKKESKDKDKCVIL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaatgcaaacctgcatcgagacacggacgggagctctttgtgtgccacaatt
gcgggagcgatgggcgatgttacagctgtcggtggagggaaaggaacagccgagaaatgc
aagaatagtgaggctcctctcagtactttggtgaacgttagttgcaataacagcaccaca
aatgttagtgctcctagctacgttaatgtcattcccagtgctgggaagtctggcgtttcg
gaagtgatggaagtcctcccggtccaggaagataagagcagcgacaccaagacgagcggg
tcggggtccggggatcagatcagtaacgggatggggcatgactcggtcctggctgcagga
gataacgagggtggtgtctcaaagttagtcaacaacaaacccgatagcccgtccgcacat
ctcgccaaggaaggcgcacgtgcatatgctgaggttctggctcgtggagaaagtgaaccg
acaaaacttgtcaaaccgactcagctgtgtccggacaaagcaatcaaagcacacttcaag
cctgcgctgtccggtgataacaccttgtcggagggattgccgagtgagagtgaccccgat
cccagccttggcggagagtcccgaagcatagattcactcgagtccttctccaacctcaac
tcctgccccagctccgacctgaacagtgagggactggaggacagaggactggccctggcc
ctgcagggcgagcacggggctgatggtaccaatacttcgtgcgcaaaggaccgagccgcc
ggccagtccatataccacattaagtggatcaagtggagggaggagaatacgccgatcatc
acccaaaacgagaacggcccctgtccattactggcaataatgaatgtccttctgctggca
tggaaggttaagatgccacctatgatggagattataactgttgagcaactgatggagtat
cttggagactacattcttgaaaccaagcctaaagagatatcggaggctcagcggctaaac
tatgagcagaacatgagtgatgccatggcagtgttgcataagctgcagaccggtctggat
gtcaacgtgaagttcacaggggtgcaagtctttgagtacaccccagaatgcattgtgttt
gatctgcttgacatccctctctaccacggctggctggttgacccgcagatgcatgacatt
gttaaggcagtgggcaactgcagctacaaccagctggtagagaagataatatcctgcaag
cagtcagacaacagtgagctggcaggggaaggcattgtggcggagcagtttctgagcagc
acagccactcagcttacgtaccacggcttatgtgagctcacatccaccgtacaggaggga
gagctgtgtgttttcttcaggaacaaccactttagcaccatgatcaaatacaagggccag
ctatacctcctggttacagaccaaggtttcctgacagaggagaaggtcgtctgggaaagt
ctgcacaatgtcgatggagatggcaacttttgtgattcggagttccggttgcggcctcct
tccaatccagagactgtgtaccgcggccaacaggatcagatagaccaggactatctgatg
gcgctgtcactgcagcaggagcagcaaaaccaggatctacagtgggagcagctccctgag
ggcatcagtgacctagagctggcaaaaaaacttcaggaagaggaggaccgacgagcctcc
cagtactaccaggagcaggagcaggagcaggcagcggcagcagtggtggcggcggcagca
gcagcacagcagggccagcaggagcctgccgagggagacgaggcggacagaggcggtgca
ggtgcaggcagtgcaggtgcaggcagtgcaggagcaggcaatgcaggagctggcgccggg
acggcagcagctgccggagccacacccagcccgggaaaacagtcctcaagcggggaacgc
aaagccaagaaagaatcaaaggataaagacaaatgtgttattttgtaa
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