KEGG   Cyclopterus lumpus (lumpfish): 117727152
Entry
117727152         CDS       T09199                                 
Symbol
gpc6a
Name
(RefSeq) glypican-6a
  KO
K08112  glypican 6
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:clum00535]
    117727152 (gpc6a)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:clum00537]
    117727152 (gpc6a)
Proteoglycans [BR:clum00535]
 Cell surface proteoglycans
  Glypican family (GPI-anchored HSPG)
   117727152 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:clum00537]
 Others
  117727152 (gpc6a)
SSDB
Motif
Pfam: Glypican Serglycin SpoIVA_C
Other DBs
NCBI-GeneID: 117727152
NCBI-ProteinID: XP_034383146
Ensembl: ENSCLMG00005000509
LinkDB
Position
3:complement(11109573..11234486)
AA seq 560 aa
MYAMWRLQVSFCTLWLLLSLSSAAESKARSCSDARQAYNAKGFSLVNVPHQEISGEHLRV
CPQGYTCCTSEMEDRLNQESKVEFENLVEESSRTMRTTFVSRHKKFDEFFLELLDNSEKS
FNSMFTRTYRKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQ
YQFTDDYLECVSKYTDQLKPFGDVPRKLKARVTRAFIAARTFVQGLMVGREVANRVAKVN
VIPACVRALTKMLYCPYCRSMPGLKPCHNYCHNVMRGCLANQADLDAEWNLFIDAMLLVA
DRLDGPLNIESVVQPVDIMISDAILTMQENSMQVSAKVFQECGQPKPSGIGRSARGISDV
FSSRFRPYTPREMPTTAAGTSIDRLVIDIKNKLKESKRFWSNLPDDICAKGKLTESDDDQ
CWNSHTKGRYFPEVVKEGLTNQVNNPEVDVDITRPDTLIRQQIMALRVMTNKLKNAYNGN
DIYFQDSSDEGSASGSGSGCSDGCTTEFVFVGTEAPVIGADRSDERAAAAAGKSFSRRPS
LLLVMLALTLPLWAMQTQWR
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgtatgcgatgtggagactgcaagtctccttctgtactctgtggctgctgctgtccctg
tcgtctgctgctgagagcaaagcgcggagctgtagcgacgcgaggcaagcttataacgcc
aaaggattcagcctcgtcaatgtgcctcatcaggaaatatcaggtgagcacctgcgtgtg
tgtccccagggatacacctgctgcacatccgagatggaggacagactcaaccaggagagc
aaagtggagttcgagaacttggtcgaggagagcagccgcactatgaggacgacatttgtc
tcgaggcataaaaagtttgacgaatttttcttggagctgctggacaattctgaaaagtct
ttcaacagcatgttcacaaggacgtacaggaagctgtacatgcagaactccgaggtgttc
caggacctgttcaccgagctaaagcgctactacaccgggggcaacgtcaacctggaggag
atgctcaatgacttctggtccagactgctggagcgcatgttccagttactcaactcccaa
taccaattcacagatgactacttggagtgcgtcagtaaatacacagatcagctaaagccc
tttggagatgtgcccaggaaacttaaggcccgggtcaccagagccttcattgctgcccgg
acgtttgtccaggggctaatggtgggtcgggaggtcgccaacagggtagccaaggtgaat
gtaatcccagcatgtgtcagagccttgaccaagatgctgtactgtccatactgtcgcagc
atgccggggctgaaaccctgtcacaactactgtcacaacgttatgaggggctgtttagca
aaccaggcagacctagatgctgaatggaacctcttcatcgatgccatgttactggtggca
gaccgactggatggacccctcaacatcgaatcagttgtacaaccagttgacatcatgatc
tctgatgccatcctgaccatgcaggaaaacagcatgcaagtgtcagccaaggtctttcaa
gagtgtggccagccgaagccatcaggaataggccggtctgcacgcggcatctcagacgtg
ttcagttctcgcttcagaccgtacactcccagagagatgccaaccacagcagctggaacg
agcatcgataggctggtgattgacatcaaaaataagttgaaagagtccaagaggttctgg
tccaacctgccagatgacatctgtgccaaaggcaagctcaccgagtctgatgacgatcag
tgctggaacagccacacgaagggcagatatttccctgaagtggtgaaggagggtctaacc
aaccaggtgaacaacccagaggtagatgtggatatcaccaggcctgacacactgatacga
cagcagatcatggctctacgtgtcatgaccaacaaactaaagaacgcttacaatggaaat
gacatctacttccaggactcaagtgacgagggcagtgcttccggcagtggcagcggctgc
tctgacggctgcacaacggagtttgtttttgttggaacagaggctcctgtgatcggagcc
gacagaagcgatgaacgcgcagcagcagccgcaggcaagtccttttcccgcagaccctcc
ctgctgctggtgatgctcgccctcacgctcccactctgggcaatgcagactcaatggaga
taa

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