Cyclopterus lumpus (lumpfish): 117727152
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Entry
117727152 CDS
T09199
Symbol
gpc6a
Name
(RefSeq) glypican-6a
KO
K08112
glypican 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
clum00535
]
117727152 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
117727152 (gpc6a)
Proteoglycans [BR:
clum00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
117727152 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
Others
117727152 (gpc6a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
SpoIVA_C
Motif
Other DBs
NCBI-GeneID:
117727152
NCBI-ProteinID:
XP_034383146
Ensembl:
ENSCLMG00005000509
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All DBs
Position
3:complement(11109573..11234486)
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AA seq
560 aa
AA seq
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MYAMWRLQVSFCTLWLLLSLSSAAESKARSCSDARQAYNAKGFSLVNVPHQEISGEHLRV
CPQGYTCCTSEMEDRLNQESKVEFENLVEESSRTMRTTFVSRHKKFDEFFLELLDNSEKS
FNSMFTRTYRKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQ
YQFTDDYLECVSKYTDQLKPFGDVPRKLKARVTRAFIAARTFVQGLMVGREVANRVAKVN
VIPACVRALTKMLYCPYCRSMPGLKPCHNYCHNVMRGCLANQADLDAEWNLFIDAMLLVA
DRLDGPLNIESVVQPVDIMISDAILTMQENSMQVSAKVFQECGQPKPSGIGRSARGISDV
FSSRFRPYTPREMPTTAAGTSIDRLVIDIKNKLKESKRFWSNLPDDICAKGKLTESDDDQ
CWNSHTKGRYFPEVVKEGLTNQVNNPEVDVDITRPDTLIRQQIMALRVMTNKLKNAYNGN
DIYFQDSSDEGSASGSGSGCSDGCTTEFVFVGTEAPVIGADRSDERAAAAAGKSFSRRPS
LLLVMLALTLPLWAMQTQWR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgatgtggagactgcaagtctccttctgtactctgtggctgctgctgtccctg
tcgtctgctgctgagagcaaagcgcggagctgtagcgacgcgaggcaagcttataacgcc
aaaggattcagcctcgtcaatgtgcctcatcaggaaatatcaggtgagcacctgcgtgtg
tgtccccagggatacacctgctgcacatccgagatggaggacagactcaaccaggagagc
aaagtggagttcgagaacttggtcgaggagagcagccgcactatgaggacgacatttgtc
tcgaggcataaaaagtttgacgaatttttcttggagctgctggacaattctgaaaagtct
ttcaacagcatgttcacaaggacgtacaggaagctgtacatgcagaactccgaggtgttc
caggacctgttcaccgagctaaagcgctactacaccgggggcaacgtcaacctggaggag
atgctcaatgacttctggtccagactgctggagcgcatgttccagttactcaactcccaa
taccaattcacagatgactacttggagtgcgtcagtaaatacacagatcagctaaagccc
tttggagatgtgcccaggaaacttaaggcccgggtcaccagagccttcattgctgcccgg
acgtttgtccaggggctaatggtgggtcgggaggtcgccaacagggtagccaaggtgaat
gtaatcccagcatgtgtcagagccttgaccaagatgctgtactgtccatactgtcgcagc
atgccggggctgaaaccctgtcacaactactgtcacaacgttatgaggggctgtttagca
aaccaggcagacctagatgctgaatggaacctcttcatcgatgccatgttactggtggca
gaccgactggatggacccctcaacatcgaatcagttgtacaaccagttgacatcatgatc
tctgatgccatcctgaccatgcaggaaaacagcatgcaagtgtcagccaaggtctttcaa
gagtgtggccagccgaagccatcaggaataggccggtctgcacgcggcatctcagacgtg
ttcagttctcgcttcagaccgtacactcccagagagatgccaaccacagcagctggaacg
agcatcgataggctggtgattgacatcaaaaataagttgaaagagtccaagaggttctgg
tccaacctgccagatgacatctgtgccaaaggcaagctcaccgagtctgatgacgatcag
tgctggaacagccacacgaagggcagatatttccctgaagtggtgaaggagggtctaacc
aaccaggtgaacaacccagaggtagatgtggatatcaccaggcctgacacactgatacga
cagcagatcatggctctacgtgtcatgaccaacaaactaaagaacgcttacaatggaaat
gacatctacttccaggactcaagtgacgagggcagtgcttccggcagtggcagcggctgc
tctgacggctgcacaacggagtttgtttttgttggaacagaggctcctgtgatcggagcc
gacagaagcgatgaacgcgcagcagcagccgcaggcaagtccttttcccgcagaccctcc
ctgctgctggtgatgctcgccctcacgctcccactctgggcaatgcagactcaatggaga
taa
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