Cyclopterus lumpus (lumpfish): 117727214
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Entry
117727214 CDS
T09199
Symbol
hcn4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117727214 (hcn4)
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
117727214 (hcn4)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
117727214
NCBI-ProteinID:
XP_034383259
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All DBs
Position
3:21421945..21477812
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AA seq
1436 aa
AA seq
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MERLHSSMRKRLYSLPQHIGQKASIMGEGEDADKDTRRKSLRMKPLPSPTSGGSCKGIGE
TKSGESVIMETDIGRPMKTSSNGDCRRFRGSLSSITSRHVHDSDSAEERRLITEGDVTPS
EESPPGAIGDEPPDQGAQGASGGGGTQKDSTDQQPGFIKLDDIDQILPDDERLYQAGFIH
RQFGAMLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVG
NLIIIPVGITFFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEIILDPQQIKI
KYLRSWFVVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLI
RYIHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPADCWVSKNK
MVNDTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHADR
ANPIPRSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEDSILGELNE
PLREEIVNFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFI
QHGVVGVLTKGNKETKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEE
YPMMRRAFETVAVDRLDRIGKKNSILQHKVQHDLSSGVLDYHESEIIQQIVQHDRDMAHC
AHLLQNAPPQTPPSPIPVIWAPLIQAPLQAAAATTPIALTHHSHLPLSLFRPPVSLLGSL
KDPPLKKFHTFVYPSTTPGSGGDSPSSTPSKLHTGVDMPLLASFRALHMTSDTGTTGSIQ
QASGSGGQHGPSGTGSGSSGRGASAFPFGPYSSFGSPSSSMAQLHTQPQRQQSFRSSTPP
LSNLFNQGSTGGSTGSGISGGAVGACGGATGWSSGGAVGGSVEGAMGGDTAWAGEDFTTG
TTGLLPGAHFGLGGATGGSVVEISGDSMGGISEGLVGAACGRLAGGASGGSAGGITCGSI
GDAARRSMGGTSRGSMKRASGGSVGGASGESLVLMTTAGSLGKASGGSIGVVSGGPLGGV
AGDSMVGNPGGLLGRVSDGSTTSRIGGVSGSGGAVIGGHIGRASGGALGSHIGCPTACPV
GGTSAGITAGLLGSSCCQSPISTGSSSPTPGQLLHSQPPPKPPQVAPLQQFAGGGRTTSG
LNFFHSPPHGSPSSSRGQHSQQPAEVSPSSLSHFSLAGLQSGLLPHQMSLERSALASLAQ
YGSANASPCLTPVAPSPTIQSPVAGRTFYYSDPSSATGSHSSPFMPHSFLPSQPPSQLYT
TERDSPLGHYSEDLKLLSSSHPTLPQEVAQALGHHTACPSVETGYYPSPFSSPTLVPKPC
SSVPEHMTPPIHLSPGHTHQTQAPGTSLALPPRRASAAYSSDLEPQTVRSKLPSNL
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggttacactcctccatgcgtaaacggctctacagtttgccacagcacattgga
cagaaagcatctataatgggcgaaggagaagacgcagacaaggacacccggaggaagagt
cttaggatgaagcctctaccgtcaccgacctctgggggaagctgcaaaggcatcggggag
accaaaagtggggagtctgtgatcatggagacagacatagggagaccgatgaagaccagc
tcaaatggagactgtcggagatttcgaggcagcctctcgtccatcacaagtcgccatgtg
cacgactctgactcggcggaggaaaggcgcctcatcaccgagggggatgtcaccccgagc
gaggagagcccccccggagccatcggcgatgagccgcctgatcaaggcgcgcaaggggcc
agcggcggcggcggtacccaaaaagactccactgaccagcagccagggtttataaagttg
gatgacattgatcaaattctgccggacgatgagagattatatcaagctgggttcatacac
agacagttcggggcaatgcttcaacccggggtcaacaagttctccctgaggatgtttgga
agtgagaaggcggttgaacgggaacaagagcgggttaaatccgccggattttggataatt
cacccgtacagtgatttcaggttttactgggacttgaccatgctgctgctgatggtgggc
aacctcatcatcatccctgtgggcatcacattcttcaaggatgaacatacgcccccctgg
attgtgttcaacgtggtctccgataccttcttcctcatggatctggtcctcaatttcagg
actggtatcgtcaaggaggacaacacagagatcatcttggatccgcaacagattaagatc
aagtacttgcggagttggtttgtggtggacttcatctcctccatccccgtggactacatc
ttcctcatcgtggagacgcgcatcgattcggatttctacaagacagcgcgcgccctgcgg
attgtgcgcttcacaaagattctcagcttgctgcgactcctgcgtctctcgagactcatt
cgctacatccaccagtgggaagagatcttccacatgacctatgacctagccagcgccatg
gtgagaatagtcaacctgatcggcatgatgctgctgctgtgtcactgggacggctgcctg
cagttcctggtgcccatgctgcaagacttccccgccgactgttgggtgtccaaaaataag
atggtgaatgacacatggggacagcagtactcctacgcacttttcaaagctatgagccac
atgctgtgtattgggtatggcatgtaccctccggtgggcatgacagacgtgtggctgact
atcctcagcatgattgtgggtgctacctgctacgccatgtttgtgggccacgcggaccgc
gctaatccaatccctcgatcatctcgacggcagtaccaggagaagtacaaacaggtggag
cagtacatgtccttccataagctgccagcagatatgaggcagagaatccacgactactat
gagcatcgttaccagggcaagatgttcgatgaggacagcatcctgggagagctgaacgag
ccgctgagagaggaaatcgtcaactttaactgtcgaaagctggtggcgtccatgcctctg
tttgccaacgcggaccccaactttgtcacctccatgctcaccaagctgaggtttgaggtg
ttccagcctggggattatatcatcagggagggcaccatcggcaagaaaatgtacttcata
cagcacggggttgtcggtgtactaaccaaaggcaataaagagaccaagctgtcagatggc
tcctactttggagagatttgtttgctgacgcggggcagaaggacggccagtgtccgagcg
gacacatactgtcgcctgtactctctgtctgtggacaacttcaatgaggtgctggaggag
tatcccatgatgagaagggcatttgagactgttgccgtggacagactggaccgtattggc
aagaaaaactccatcctgcagcacaaggtacaacacgacctcagctctggtgtactcgac
taccacgagagtgagatcattcagcagattgtgcagcatgacagggatatggcccactgc
gcccacctcttgcagaacgctccaccccagacgcctccttcccctatccctgtcatttgg
gcccccctcatccaggcccctctccaggcagcagctgccaccacccctattgccctgacg
caccattcccaccttccacttagtcttttcagacctccggtttcactactggggtcccta
aaggaccctccccttaagaagttccacacatttgtttatccatccacaacacctggctct
ggtggagactccccttctagcacaccatctaaactgcacactggggtggacatgccattg
ctggcctcttttcgggctctgcacatgacgtcagatacagggacaactggatctatccaa
caggcctcaggtagcggaggccagcatggacctagtgggactggctcggggtccagtgga
agaggggcttctgctttccctttcggaccatactcttcctttggttcaccctcatctagt
atggcccaactacacacacaaccacagcgtcaacagtcgtttcgctccagcaccccacct
ctctcaaacctcttcaaccaaggatctacaggtggaagcacagggtcaggaataagtgga
ggggcagttggagcctgtggtggtgctacagggtggtcttcaggtggagcagttggaggg
tctgtggaaggagccatgggaggagacactgcttgggctggagaggactttacaactgga
acgacagggctactgcctggagcgcactttgggttggggggagctactggtggatcagta
gtcgagatctcaggggattcaatgggagggatatctgaaggattagtaggagctgcttgt
ggcaggttagcagggggggcatcagggggatcagcagggggcattacatgcgggtcaata
ggagatgcagccaggagatcaatgggagggacatctaggggatcaatgaaaagagcttct
gggggatcagtgggaggggcttctggagagtcactggtattgatgactactgcaggatcg
ttgggaaaggcttctggtggatcaataggagtggtttctgggggaccacttggaggggtg
gctggtgattctatggtagggaatcctggaggattgttgggaagggtttctgatggatcc
acaactagccgtataggaggtgtgagtgggtcagggggagcggtgattggaggacatatt
ggcagagcatcaggaggagcattagggagccatatagggtgtccgacagcctgtcctgta
ggagggacttctgctggaattacagctggacttcttggttcctcgtgttgtcagagtcct
atatctaccggctcatccagccctacgcctggtcagcttctacatagccagccacctccc
aagccgcctcaggtagctcctttgcagcagtttgctgggggaggcaggacaaccagtggc
ttaaacttcttccattcccctccacatggctctccatcctctagcagaggacagcacagc
cagcagcctgctgaggtctccccatcatccctcagccacttcagcctggcaggcctccag
tctggcttactgcctcaccagatgtccctggagaggtctgccctggcctccctggcccag
tatggttcagcaaatgcctccccctgccttaccccagtggcgcccagccctactattcaa
agcccagtggcgggtaggactttctactacagcgacccctcaagtgccacaggatcccac
agttctccattcatgcctcactcttttctcccttcacagcctcccagccagctatacaca
acagagagagattctccactgggccattattctgaggaccttaagcttttatccagctcg
cacccaactctgccccaggaggtggcccaggccttaggccaccatactgcttgcccctct
gtggaaactggatattacccctcacccttttcctcgcccactcttgtgcccaaaccctgt
agctcagtgccagaacacatgactcctccaatccacttgtctccggggcacactcaccag
actcaggcccctgggacctccctggccttaccaccacggagggcctctgctgcctactca
tcagatctagaacctcaaactgtccgctctaaactcccttccaatttgtga
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