Cyclopterus lumpus (lumpfish): 117727266
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Entry
117727266 CDS
T09199
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00562
Inositol phosphate metabolism
clum01100
Metabolic pathways
clum04020
Calcium signaling pathway
clum04070
Phosphatidylinositol signaling system
clum04081
Hormone signaling
clum04082
Neuroactive ligand signaling
clum04261
Adrenergic signaling in cardiomyocytes
clum04270
Vascular smooth muscle contraction
clum04310
Wnt signaling pathway
clum04371
Apelin signaling pathway
clum04540
Gap junction
clum04621
NOD-like receptor signaling pathway
clum04912
GnRH signaling pathway
clum04916
Melanogenesis
Module
clum_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
117727266
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117727266
04371 Apelin signaling pathway
117727266
04020 Calcium signaling pathway
117727266
04070 Phosphatidylinositol signaling system
117727266
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117727266
04081 Hormone signaling
117727266
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
117727266
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117727266
09152 Endocrine system
04912 GnRH signaling pathway
117727266
04916 Melanogenesis
117727266
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117727266
04270 Vascular smooth muscle contraction
117727266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117727266
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
117727266
Membrane trafficking [BR:
clum04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
117727266
Endocytosis
Macropinocytosis
Phospholipase C
117727266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
PLC-beta_C
PKK
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
117727266
NCBI-ProteinID:
XP_034383355
Ensembl:
ENSCLMG00005017187
LinkDB
All DBs
Position
24:4414393..4463296
Genome browser
AA seq
1241 aa
AA seq
DB search
MTKSYEFNWQKHLPEFMQEGASFDRFDEDPYVFEPNCQMRVDEYGFFICWKSEGKEGQVL
ECSLINSIRVGAVPKDPKILSSFETLGKTEADLEGCIICICSGTDLVNLNFVFMVAENPD
TARKWIEGLRSVIHNFKANNVCPMTCLKKHWMRMCFLTNVNGKIPVRGITRTFASGKTEK
GIFQALKDLGLPSGKNDEIEPSDFTYAIFYSLTQKICPRTDIEELFKNINGNKTDYLTVD
QLVSFLNENQRDPRLNEILFPFYDPKRAMQIIEKYERDEELKKKGCMSSDGFCRYLMSDE
NAPVYLDRLELYQEMEQPLAHYFISSSHNTYLNGRQFGGKSSVEMYRQVLLSGCRCVELD
CWDGKGEDQEPIITHGKAMCTDILFKDVIQAIKETAFVTSDYPVILSFENHCSKPQQYKM
SKYCEEIFGEFLLKQPLENYPIEAGRPLPSPNDLKRKILIKNKRLKPEVEQKQLEAFKKH
MEAGETNTPAIIMGEENEEDTENGPLREKEAEEKDLNSVAPSSPSEATTEKEANSVSQSN
AVSTTKENHNNSIKKVTDDEATETSEATEATTDISEASDQDNNKKGVEEPEDSEEALIAQ
YTYVGGTTNIHPWLSAMVNYAQPVKFQSFDVAEDRNIHHNMSSFNESVGLGYLKTNAIEF
VNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVSLNFQTPDLAMQLNQGKFEYNGSC
GYLLKPDFMRRSDRTFDPFSETPVDGVIAATCSVQVFSGQFLSDKKIGTYVEVDMYGLPT
DTIRKEFRTRMVMNNGLNPAYNEEPFVFRKVILPDLAVLRIGVYDDNNKLIGQRLLPLDG
LQAGYRHISLRNEGNKPLSLPTIFCQIILKTYVPDGFGAIVDALSDPKKFLTIAEKRADQ
MKALGIDTNDIADVPSGSSKSDKKGKGKGDAVKASVTPQASSDMAQTSNSAQNNAAETKK
DNALVPNVSIDDLKLMKTYLKLTKKQQKELNTLKKKQSKDQNTMQKVHCSQVDKLVSQHE
KEKTNQEKLLEKAVKKRGENNCQELKKETEDKIQTLTADHKVKVKEITAQHTKEWSELIS
SQGSEEQEVKDGHVTQQCEHLKKLLTTVQEQQTLQLKLIHERQSKEMRANQAKMSMENSK
AISQDKSIKNKAERERRVRELNSSNTKKFLDERKRLAMKHQKEMEQLEKNQRVQLEKLEK
FNEQLLKSHHANKHLQGQRHAADGEDGGGDGPQTGHGGVSE
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcctacgagttcaactggcagaagcacctgcccgagttcatgcaggagggc
gcctccttcgacaggtttgacgaggacccgtacgtctttgagcccaactgtcagatgagg
gtggacgagtacggctttttcatctgctggaagagtgagggaaaggagggccaggtcctc
gagtgttccctcatcaacagcatccgcgttggcgccgtcccaaaggaccccaagatctta
tcgtcgttcgagaccctcggaaagacggaggccgacttggagggctgcatcatctgcatc
tgcagcggcacggacctggtcaacctcaacttcgtcttcatggtggcggagaaccccgac
acagccaggaagtggatcgaggggttgaggtctgtgattcacaactttaaggccaacaac
gtctgtccaatgacctgcctcaagaaacattggatgagaatgtgcttcctgaccaatgtg
aatgggaagattcctgtgagaggcattactcgaacgtttgcgtcgggaaaaacggagaag
gggatcttccaggctctgaaggatctcggccttccgagcggaaagaacgacgagatcgaa
ccgtcagatttcacctacgccattttctactcgctcactcagaagatctgccctcgcacg
gacatcgaggaactcttcaagaacatcaatgggaacaaaactgattatttaaccgtagac
cagttagtcagctttctgaatgaaaaccagcgtgacccgaggttaaatgagatcctgttc
ccgttctacgaccccaagagagccatgcagatcatcgagaagtacgagagggatgaagag
ctgaagaagaaaggctgtatgtccagtgacgggttctgccggtacctgatgtcagatgaa
aacgctccagtgtacctggatcggctggagctgtaccaggaaatggaacagccgctggcc
cactacttcatcagctcctcccacaacacgtacctgaacgggcgacagtttggaggaaag
tcttcagtagagatgtaccggcaggtcctgctgtccggctgcagatgtgtggagctggac
tgctgggatgggaaaggagaggaccaggagcccattatcactcatggaaaggccatgtgc
acagacatcctgttcaaggatgtcatccaagccatcaaagagacggcgttcgtgacctca
gactatcctgttattttgtcctttgaaaaccattgcagtaaaccacagcagtacaagatg
tccaagtattgtgaggagatcttcggtgagttcctcctcaaacagcctctggaaaactac
ccgattgaagcggggcgccccttaccttctccaaatgacctcaaacgcaaaatcctcatc
aaaaacaaacgcttgaaacctgaagttgaacagaaacagctagaggcctttaagaaacac
atggaggcaggagagaccaacacccccgccatcattatgggagaggagaatgaagaggac
acagagaacggtccgctaagagagaaggaggctgaggagaaggatttgaattcagtggcc
cccagcagtccgtcagaggcgaccactgagaaagaggccaatagtgtttcccagagcaac
gcagtcagcacgacgaaagaaaaccacaacaacagtatcaagaaggtgaccgacgacgaa
gcgacggagacgtctgaagccacagaagcaacgacggacatctcggaagcatccgaccaa
gacaacaacaagaagggcgtggaggagccggaggactctgaagaggctctgatagctcag
tacacttacgtaggaggcaccactaacatccacccgtggctctcggctatggtcaactac
gcacagcccgtcaagttccagagttttgacgtggcggaggacaggaacattcaccacaac
atgtcctcttttaacgagtcggtcggtctgggctatctgaagaccaacgccattgagttt
gtcaactacaacaagcgtcagatgagccgtatctaccccaaagggggccgggtggactcc
agtaattacatgcctcagatcttctggaacgcgggctgccagatggtctcgctcaacttc
cagaccccagatctggccatgcagttgaaccagggaaagtttgagtacaacggctcctgc
gggtacctgctgaagcccgacttcatgcggcggtcagacaggacgttcgacccgttctca
gagacgcctgtggacggagtcatcgctgcgacctgcagcgtgcaggtgttctctggacag
ttcctgtcggacaagaaaatcggcacgtacgtcgaggtcgacatgtacgggctgccgacg
gacaccatccgcaaggagttccgcacgcgtatggtgatgaacaacggactgaacccggcc
tacaacgaggagccctttgtgttcagaaaggtgatcttaccggatctggcggtgctccgc
atcggcgtctacgacgacaacaacaagctgatcggccagcgcctcctgcctctggacggc
ctgcaggccggctaccgccacatctcgctgaggaacgagggcaacaagcccctgtcgctg
cccaccatcttctgccagatcatcctcaagacctacgtgcccgacggcttcggagcgatc
gtggacgccctgtcggacccaaagaagttcttgaccatagcagaaaaaagagccgaccag
atgaaggcactggggatcgacacgaacgacatcgcggacgttcccagcggaagctcaaag
agcgacaagaagggaaagggcaaaggagacgccgtgaaggccagcgtgacgccgcaggcc
agctccgacatggcccagacctccaactccgcccagaacaacgcagcggaaaccaagaag
gataacgcactcgtgcctaacgtcagcattgacgacttgaaactaatgaagacgtacctt
aagctgactaaaaagcaacagaaggagctcaacactttaaagaagaagcagtccaaggat
cagaatacaatgcagaaagtccactgcagccaggtagacaagctggtgtctcagcacgaa
aaggagaagacaaaccaggagaagctgttggagaaagccgtcaagaaaagaggggaaaac
aactgccaagagctcaagaaagagaccgaggacaagatccaaacactgaccgccgaccac
aaagtcaaggtgaaggagatcacggcgcagcacactaaagagtggtccgagttgataagc
agccagggcagcgaggagcaggaggtgaaggacggccacgtcacacagcagtgcgaacac
ctcaagaagctcctgaccaccgtgcaggagcagcagaccctgcagctgaagctcatccat
gagcggcagagcaaagagatgcgtgccaaccaggccaagatgtccatggaaaacagtaaa
gccattagccaggacaagtccatcaagaacaaggccgagagagagaggagagtacgagag
ttgaacagcagcaacaccaagaagttcctggacgagaggaagaggttggccatgaagcat
cagaaggagatggagcagctggagaaaaaccagagagtccagttggagaaactggagaag
ttcaatgagcagcttttgaaatcacaccatgcaaacaaacatcttcaaggccaaagacat
gcagcagatggtgaagatggaggaggagatggaccgcagaccggccacggtggtgtgagc
gaatga
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integrated database retrieval system
