Cyclopterus lumpus (lumpfish): 117727329
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Entry
117727329 CDS
T09199
Symbol
chrna2b
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117727329 (chrna2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117727329 (chrna2b)
Ion channels [BR:
clum04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117727329 (chrna2b)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117727329
NCBI-ProteinID:
XP_034383466
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Position
24:7525014..7533128
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AA seq
555 aa
AA seq
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MGREHLFSAWTAALYLLLLCASGLCYEKTHSHAEDELFKTLFAGYNKWSRPVPNISDVVI
VKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWKPSDYDNVTSIRVPSELIWVPDI
VLYNNADGEFAVTHMTKAHLFHTGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWT
YDKAKIDLERTENTVDLNNYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLP
LFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVI
PLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHKMPRWVHSVFLNLIPRWLFMRRPAP
DGRRRKLLLMQQEAALVRRHGRIAGYKPGNCLSTSATWFGDGATSEDHDRSSYEDLELGT
LTSYFSFRPPSPRPPGTTPPPHQKNPQNSQNQQEGPAATKRLLTGARVNPTQRPTKAVHT
VSDPTFLLSPSVIRALEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLL
GTIGLFLPPWLAGMI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcgagcacctgttctccgcgtggacggctgcgctctacctgctgctcttgtgt
gcgtcaggtctttgttacgagaagacccactcgcacgccgaggatgagctcttcaagacg
ctgttcgctggttacaacaagtggtcgagacccgtgcccaacatctccgacgtcgtcatc
gtcaagttcggactgtccatcgcacaactcattgatgtggatgagaagaaccaaatgatg
acaaccaacgtgtggcttaaacaggagtggaatgactacaaactacgctggaaaccatct
gactatgacaatgtgacgtccataagagtgccgtcagagctcatatgggtcccagacatc
gtcctctacaacaacgctgacggagagtttgccgtgacccacatgacgaaagctcacctc
ttccacacgggtaaagtccgctgggtcccgccggccatttacaagagctcctgcagcatc
gacgtcaccttcttccccttcgatcaacagaactgcaaaatgaaatttggctcctggacg
tacgacaaggccaagatcgacctggagcgcactgagaacacagtggacctgaacaactac
tgggagagcggcgagtgggccatcatcaacgccgtgggcacgtacaacaccaagaaatac
gactgctgccacgagatctacccggacatcacctacttcttcatcattcgaaggctcccc
ttgttttacaccatcaacctcatcatcccctgtctgctgatctcctgcctcacagtcctg
gttttctacctgccctccgactgcggcgagaagatcaccctgtgcatctccgtgctgctg
tccctcaccgtcttcctcctcctcatcaccgagatcataccgtccacgtcgctcgtcatc
ccgctcatcggcgagtacctcctcttcaccatgatcttcgtcaccctctccatcgtcatc
accgtcttcgtgctcaacgtgcaccaccgctctcccagcactcacaagatgccccgctgg
gtccactccgtgttcctgaacctgatcccacgctggctgttcatgcggcggcccgcgcca
gacggccgccgtcgcaagctgctgctgatgcagcaggaggcggcgctggtgcgccggcat
ggacggatcgccggttacaaacccggcaactgcctcagcacctcggcgacctggtttgga
gacggcgccacgtcggaggaccacgacaggagctcttatgaggatttggagttgggaacg
ctgacgtcgtatttctcctttcgccctccttcgcccagacctccagggacgacccctcca
ccacatcagaaaaacccacagaacagccagaaccaacaggaggggcccgcggcgacaaag
agacttttaacaggggccagagtcaaccccactcagaggcccacgaaagctgttcacacg
gtgtcagacccaacattcctgctttcaccgagtgttatacgcgcgctggaaggcgtgcac
tacattgcagaccatctgagggctgaggatgccgacttcagcgtgaaagaggattggaag
tatgtcgccatggtgattgaccgcatcttcctgtggatgttcattattgtgtgcctgctc
gggaccatcggcctcttccttcccccgtggctagctggcatgatctag
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