Cyclopterus lumpus (lumpfish): 117727363
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Entry
117727363 CDS
T09199
Symbol
rars2
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117727363 (rars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clum01007
]
117727363 (rars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clum03016
]
117727363 (rars2)
03029 Mitochondrial biogenesis [BR:
clum03029
]
117727363 (rars2)
Enzymes [BR:
clum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
117727363 (rars2)
Amino acid related enzymes [BR:
clum01007
]
Aminoacyl-tRNA synthetase
Class I (G)
117727363 (rars2)
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117727363 (rars2)
Prokaryotic type
Other AARSs
117727363 (rars2)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117727363 (rars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
UvrD-helicase
tRNA-synt_1g
R3H-assoc
Motif
Other DBs
NCBI-GeneID:
117727363
NCBI-ProteinID:
XP_034383526
Ensembl:
ENSCLMG00005011966
LinkDB
All DBs
Position
24:12659651..12668322
Genome browser
AA seq
586 aa
AA seq
DB search
MACFFRRRIAAKLGRTLQQSEDAFIPALSAVPVFKKQQGADFKLSISTLRISGILPSTGD
IQLQTEHLATRLKQDSVVEDISAGCGIINFKVNRKLLVQKMLEPFGKEEDDKFGLNSELF
NTLKKGTTLVEYSSPNIAKKFHAGHLRSTIIGNFIANLKQCLGNNVIRMNYLGDWGMQFG
LLGAGFAQFGCQEKLKENPLQHLFEVYVQVNKEAEHNEDMKQAARDFFRQLEQHDNEAVS
LWQQFREITVDEYQQVYKRLGVHFDVYSGESFHQHQAQEVVQQLQSRDLLKTSEKGTGVV
DLSTSGDTSSVCTVLRSDGTTLYITRDLAAAIDRKEKYNFNEMIYVTDKSQANHFRQLFH
ILLAMGHSWADRCKHVPFGLVRGMKTRKGEVVFLEDVLDEARARMLHNMSQSKTTKEMDN
PEDTAEKVGISALIVQDFRGPLQSDYKFDWDRMLQAQGDTGVFLQYTHARLSSLMRRNDG
VKAVAFDPSLLLEQTSITILQHLLRYDEVLYQSAQDLQPKHLVNFLLKLCHLIASAHREL
PVKGSAQDVAQVGRESLKYISISLFLNVPSTLLNTLMNILKNKHIG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtttcttcagaagaagaatagcagcaaagctgggtcgcacgctgcagcagtct
gaggatgccttcataccagctctgtcagcagttccagtttttaagaaacagcagggtgct
gactttaaactatcaatcagcacgttacggatcagtgggattttaccatccaccggtgac
attcagctgcagactgaacacttggccactcggttgaagcaggacagtgtggtggaggac
atatctgctggatgtggaattatcaactttaaagtgaatcgcaaacttcttgtccagaaa
atgttggagccatttggaaaggaggaggatgataaatttgggttaaatagtgaacttttc
aatactctcaagaaaggaacaacattagttgagtacagctctccaaatatagccaaaaaa
tttcatgctggacacttaagatctacaattatcggtaactttattgctaacttaaagcag
tgtcttggaaacaatgttattcgaatgaactaccttggagactggggtatgcagtttggt
ttgctgggagctgggtttgctcagtttggatgtcaagagaaactgaaagagaatccctta
cagcatttgtttgaggtttatgttcaagtaaacaaggaggcagagcacaatgaggatatg
aagcaggctgccagagacttctttagacagctggaacagcatgacaacgaggctgtgtcg
ttatggcaacagttcagggagatcaccgtggacgagtatcaacaagtgtacaagcggtta
ggggtccactttgatgtttactccggggagtcctttcaccagcatcaagcccaggaggtg
gtgcagcagcttcagagtcgagacctgttgaaaacctctgagaaaggaaccggtgtagtg
gacctctccacgagtggagacacgagcagcgtctgcacggtgctccgcagtgacggcaca
actctctacatcaccagagatcttgctgccgcgattgaccgaaaagaaaagtacaatttt
aacgagatgatttatgtgacagataaaagtcaagcgaatcacttccgccagttgttccac
atcctgctcgctatgggacattcttgggctgacaggtgtaagcatgtgccctttggcctg
gtgcggggtatgaagacccggaagggtgaggtggtgtttctggaggacgtgctggatgaa
gctcgagcccggatgctccacaacatgagccagtcaaaaacgacaaaggaaatggataac
ccagaggacacggcagagaaagtgggaatcagtgcactaatagtgcaggacttcagaggt
ccgctgcagtccgactacaagtttgactgggacaggatgctgcaggctcagggagacacg
ggggtgtttctccagtacacacatgctcgactcagcagcttaatgcggaggaatgacggt
gtcaaggcagttgcatttgatccatccctcctgctcgagcagaccagtatcaccatcctg
cagcacctccttcgctatgatgaagtgttataccagtcggcccaggatctgcagcccaaa
cacctcgtcaactttctgttgaagctatgccacctgatcgcctcagcacaccgagagctg
ccggtgaaaggaagcgctcaggatgttgctcaggtaggaagagaatcactcaagtacatc
tctatcagccttttcttaaatgtaccatcaactttattaaatacattaatgaatatttta
aaaaacaagcacattggctga
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