Cyclopterus lumpus (lumpfish): 117727437
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Entry
117727437 CDS
T09199
Name
(RefSeq) homeobox protein OTX2-like isoform X1
KO
K18490
homeobox protein OTX2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117727437
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117727437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
117727437
NCBI-ProteinID:
XP_034383643
Ensembl:
ENSCLMG00005017404
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All DBs
Position
24:4782485..4784048
Genome browser
AA seq
307 aa
AA seq
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MMSYLKQPPYTVNGLSLSASGVDMLHPSVGYHGNIHPLFSILSGTPRKQRRERTTFTRAQ
LDLLENLFNKTRYPDIFMREEMALKINLPESRVQVWFKNRRAKHRQQAQQTQSGAQNKAV
SKPVKKKSSPVREASSESGASGQFTPPSSTSLPAVSGSSSGSSAAPVSIWSPASISPLSD
PLSTSSSCMQRSYPMAYTQASGYNQGYTGSSSYFPGMDCGSYLSPMHHQLSAAGSAMSPM
ASNGVSGHLSNAASSLSSSAYGAAGLGFSSAADCLDYKDQTASSWKLNFNADCLDYKDQA
AWKFQVL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttatctgaagcagccgccgtacacggtgaacggactgagtttatccgcctcg
ggagtggacatgctgcatccctcagtgggataccacggtaatatacaccccctattctcc
atcttatcaggaacccctcgcaaacagaggagggagaggacgaccttcacccgggcccag
ctcgacctgctggagaacctgttcaacaagacccggtacccggacatcttcatgagagag
gagatggccttaaagatcaacctgccggaatccagagtgcaggtgtggttcaaaaaccgg
cgagccaaacatcgccaacaggcccagcaaacccaaagcggcgcgcagaacaaggcggtc
agcaagccggtgaagaagaaaagctccccggtcagagaggccagctcggagagcggagcc
agcgggcagttcacgccgccctcgagcacctcgctgccggccgtgagcggcagcagcagc
ggcagcagcgcggccccggtgtccatctggagcccggcctccatctccccgctctccgac
ccgctgtctacctcctcctcctgcatgcagcgctcctaccccatggcctacacgcaggcg
tcgggctacaaccagggctacacgggctcctcgtcctacttccccgggatggactgcggc
tcctacctttcgcctatgcaccaccagctctccgccgcgggctccgccatgagccccatg
gcgagcaacggggtgtccggccacctgagcaacgccgcgtcgtccctctcctcgtcggcg
tacggcgccgcggggctcggcttcagcagcgccgcggactgcctggactacaaggaccaa
acggcctcctcgtggaagctcaatttcaacgcggactgtttggattacaaagaccaggcc
gcgtggaaatttcaagtgttgtga
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