KEGG T09199: 117727493

Cyclopterus lumpus (lumpfish): 117727493

Entry

117727493         CDS       T09199

Name

(RefSeq) rho-related GTP-binding protein RhoB-like

K07856

Ras homolog gene family, member B

Organism

clum Cyclopterus lumpus (lumpfish)

Pathway

clum05132

Salmonella infection

Brite

KEGG Orthology (KO) [BR:clum00001]
09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117727493
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117727493
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:clum04031]
    117727493
Membrane trafficking [BR:clum04131]
Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    117727493
GTP-binding proteins [BR:clum04031]
Small (monomeric) G-proteins
  Rho Family
   RhoA/B/C [OT]
    117727493

SSDB

Motif

Pfam:

Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA SRPRB

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

24:complement(12552945..12555943)

AA seq 196 aa
MADIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFETYVADIEVENKQVQLALWDT
AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEIKHFCPNVPIILVANKKD
LRNDENVKNELSRLKLEPVRAEDGRAMAMRIGAYAYLECAAKTKEGIWEVFETATRASLQ
KQKMPSKRCLNCCVLM

NT seq 591 nt +upstreamnt +downstreamnt
atggcagacatacggaagaaactagtcgtggtgggagacggcgcgtgtgggaaaacttgt
ctattgatcgtattcagcaaagacgagttccccgaggtgtatgtcccgactgtttttgag
acatacgtggcggatatagaggtggaaaacaagcaagtccagctagctttgtgggacacc
gctgggcaggaggactacgatcggctgcgcccactctcctacccggacaccgatgtcatt
ctgatgtgcttttccgtggacagcccggactcgttggaaaacatccccgaaaagtgggta
cccgaaatcaaacatttttgtcccaacgtgcccattatactggtggccaacaagaaagat
ctccgcaacgacgagaacgtgaagaacgagctgtcccggttgaagctggagcccgtgaga
gcagaggacgggcgggccatggccatgcgcattggcgcatatgcctatttggagtgcgct
gctaaaaccaaggagggcatctgggaggtattcgaaacggcaacacgtgcgtctttacaa
aaacagaaaatgccatcgaaacggtgtctcaattgctgtgttttgatgtga

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