Cyclopterus lumpus (lumpfish): 117727521
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Entry
117727521 CDS
T09199
Symbol
extl3
Name
(RefSeq) exostosin-like 3
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
clum01100
Metabolic pathways
Module
clum_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
117727521 (extl3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117727521 (extl3)
Enzymes [BR:
clum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
117727521 (extl3)
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
117727521 (extl3)
Glycosyltransferases [BR:
clum01003
]
Glycan extension
O-Glycan
117727521 (extl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
ADIP
MscS_porin
EXOC6_Sec15_N
TBK1_CCD1
TPR_MLP1_2
DUF1664
Motif
Other DBs
NCBI-GeneID:
117727521
NCBI-ProteinID:
XP_034383775
Ensembl:
ENSCLMG00005019029
LinkDB
All DBs
Position
24:10499646..10525585
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AA seq
915 aa
AA seq
DB search
MQRNGGGGGAGGQPWVLRRVRLTWLSFMLFFILVFFPLIAHYYLTTIDEAGGPDKRIFGP
RPGGELCEAKHVQDLCRIRESVSEELLQLEAKRQELNGEIARLNLRIEACKRSIDSAKQD
LLQLKNVISQTEHSYKELMAQNQPKLSLPVRLLPDKEDLGLPPPKSARSCRLRSCFDYAR
CPLTSGFPVYVYDTGSYQWADYLDPLVKQAFAASVKSNIYITDNPSIACLYLVLVGELQE
SSSPPPSPSELEKQLKALPYWRSDGHNHVLVHFSRKSMTQNFLYNVSTGRAAVAQSTFLE
QQYREGFDLVVSPLVHALSEPNFLEVPPQVPVKRKYLFTFQGERVESLRSSLQEAPPQSF
EEEMEGDPPADYDDRIIGTLKAVQDSHLDQVLVEFTCKNPQPSLLTEWALCGEREDRLEV
LKASTFGLVISPGDGQLVASAGCGMRLFEALEVGTIPVVLGDHSKLPYHQFIRWSEAAII
VPKPRVTELHFLLRSLSDNDMLAMRRQGRFLWETYFSTTENVLNTLLASIRTSVQVPAAP
IKEEPAHEIPHKAGKMAGTDANLADNGDLDLGPVETEPPYASPRFLRNFTYTASDTYRTW
NRAPGPFHLFPHTPLDPVLPSEAKFLGSGTGFRPIGGGTGGSGKEFQAALGGNVPREQFT
VVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKPPSDDLLWPDIGLPIVVVRTDKNS
LNNRFLPWDAVETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDVNHQS
WLYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDDYINCEDIAMNFLVSHIT
RKPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVDSVLF
KTRLPHDKTKCFKFI
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtaacggtggtggcgggggtgccggtggccagccatgggtgctacgccgtgtg
cgtctcacctggctcagtttcatgctcttcttcatcctggttttcttcccactcattgcc
cactactacctcactaccattgacgaagctgggggtcctgataagcgcatcttcgggccg
cggcccggtggtgaactgtgtgaggcgaaacatgtgcaggacctgtgccgaatccgcgag
tcagtcagcgaggagctgctgcagctggaggccaagaggcaggagctcaacggggagatc
gcccgactcaacctgcgcattgaggcctgcaagcgaagcattgacagcgccaagcaggat
ctgctgcagctgaagaacgttataagccagacagagcattcctataaagaactaatggcc
cagaaccagccaaagttatcactaccagtcaggctgctgccagacaaggaggacctggga
ctgccaccacccaagtctgcccgctcctgccgcctacgctcctgctttgactatgcgcgc
tgccctcttacctctggctttcctgtgtatgtctacgacacaggctcctatcaatgggcg
gattatcttgacccactggtgaagcaggctttcgcagcatcagttaagagcaacatttat
ataactgataaccccagcattgcttgtctgtatttagtgctggtaggggagctacaagag
tcctcctccccaccgccatctccttcagagctggaaaagcaactaaaagctctcccttac
tggaggtctgatgggcacaatcatgtactggtgcatttctccagaaagtccatgactcag
aactttctctataatgtgagcacaggtcgggcggcagttgctcagtccaccttcctggag
cagcagtaccgcgagggcttcgacttggttgtctccccactggttcatgccctttccgaa
ccaaattttttggaagtgccccctcaagttcccgtaaagaggaaatacctctttaccttc
cagggggagagggtggagtcactgaggagcagcttacaggaggcacccccccagtctttc
gaggaggaaatggaaggagacccaccagccgactacgacgatcgcatcatcggcacctta
aaggcagtgcaggacagccacttggatcaggtgctggtggagttcacctgcaagaaccca
cagccgagtttgctgactgagtgggctctctgtggagagagggaggacaggctggaggtc
ctcaaggcttcaacttttggcttggtgatttctccaggagacggacagctagtggcctca
gcaggctgtgggatgaggctctttgaggccctcgaagtagggaccattccagttgtgcta
ggggaccactccaaactaccatatcaccagtttattcgctggagtgaagcagccattatc
gtcccaaagcctcgtgtcacagagctacacttcctgctacgcagcctatcagacaatgac
atgttggcgatgaggcgtcagggccgctttctgtgggagacctacttctccaccacggag
aatgttcttaacaccctcctggccagcatcagaaccagcgtccaggttcctgccgcaccc
atcaaagaagagcccgcccacgagattccccacaaagccgggaagatggcaggaactgat
gccaacctggctgacaatggagatctggatttgggtcctgttgagacagagcccccctac
gcctctccacgcttcctccgcaacttcacatacacagcttcagacacttatagaacgtgg
aaccgggccccaggacctttccatctgttccctcacactcctctggaccctgtgctgccg
tctgaagccaaattccttggctcaggtactgggtttaggcctattggtggaggtacggga
ggctcggggaaggagtttcaggcagctctcggaggaaatgtgccccgagaacaattcacc
gtggtgatgctgacttatgagagggaggaggtgctgatgaactctctggagagactgaat
ggactgccgtacctcaacaaggtcgtggtggtgtggaactcgcccaagcctccttcagat
gacctgctgtggccggacatcggcctgccgattgtggttgtccgcacagacaagaacagc
ctcaacaaccgctttcttccctgggacgccgtggaaaccgaggccatcctatcgattgac
gatgacgctcatctccgccacgatgagatcatgttcgggttcagagtgtggcgtgaggcc
agagatcgtatcgtgggtttccccgggaggtatcatgcatgggacgtgaatcaccagtcc
tggctgtacaactccaactactcctgtgagctctccatggtcctgacaggagctgctttc
ttccataagtactacgcctacttgtactcctacgtgatgccccaagccatcagggacatg
gtggacgactacataaactgcgaggacattgccatgaacttcctggtctcgcacatcacc
cgcaaaccacccatcaaggtgacatcgcgttggaccttccgctgtcccggctgccctcag
gccctgtcacacgacgactcgcatttccacgaacggcacaagtgcatcaacttcttcgtc
aaggtgtacggctacatgccgctgctgtacacgcagttccgcgtggactctgtgctgttt
aagactcgtttgccccacgacaagaccaagtgcttcaagttcatctag
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